CX291370

Overview
NameCX291370
Unique NameCX291370
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length755
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291370 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.471e-35
Identity = 86/210 (40.95%), Postives = 127/210 (60.48%), Query Frame = 2
Query:  125 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKF--VDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATVV--NLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFTNRLY-------PKQTPHWTNIRNNLKKTCP 715
            LS +FYD++CP++  I    I NAL+ D  +AA ++R+HFHDCFV GCD S+LL+ +TS +  +        A  F  +D+++A V K C + VSCAD+LA+AA++SV L+GGP++ +P GRRDS + F  +   NLP+PF     + + F+    + A + VALSGGHT G   C    +RLY       P  T   + + + L+K CP
Sbjct:   24 LSPSFYDKTCPQVFDIATTTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAVEKACPKTVSCADLLAIAAQESVVLAGGPSWRVPNGRRDSLRGFMDLANDNLPAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLDKSYL-STLRKQCP 232          
BLAST of CX291370 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.921e-35
Identity = 88/210 (41.90%), Postives = 122/210 (58.10%), Query Frame = 2
Query:  125 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKF--VDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK-TFATV--VNLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFTNRLY-------PKQTPHWTNIRNNLKKTCP 715
            L+ TFYD SCP + +IVR  I N L+ D  +AA ++R+HFHDCFV GCD S+LL+ +TS +  +        A  F  VD ++A V + C R VSCAD+L +AA+ SV L+GGP++ +PLGRRDS+  F  +   NLP+P      +   F     N   + VALSGGHT G   C    +RLY       P  T + T ++  L++ CP
Sbjct:   11 LTPTFYDNSCPNVSNIVRDIIINELRSDPSIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSRQAFLDLANANLPAPSFTLPELKAAFANVGLNRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQ-TLRQQCP 219          
BLAST of CX291370 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.509e-35
Identity = 75/184 (40.76%), Postives = 113/184 (61.41%), Query Frame = 2
Query:  113 VAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKT--FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 658
            + +G    FY  +CP+ ESIV+  ++   + D  +A G++R+HFHDCFV GCDGS+L+EGS +E+ A PN +L+      +++ + ++   C  VVSCADILALAARDSV  + G  + +P GRRD +    A   +LP+ F +  +    F  K  N ++ VAL+G HT+G A C    +RL+
Sbjct:   28 LGQGTRVGFYSSTCPRAESIVQSTVRAHFQSDPTVAPGILRMHFHDCFVLGCDGSILIEGSDAERTAIPNRNLK--GFDVIEDAKTQIEAICPGVVSCADILALAARDSVVATRGLTWSVPTGRRDGRVSRAADAGDLPAFFDSVDIQKRKFLTKGLNTQDLVALTGAHTIGTAGCAVIRDRLF 209          
BLAST of CX291370 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.509e-35
Identity = 86/210 (40.95%), Postives = 125/210 (59.52%), Query Frame = 2
Query:  125 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKF--VDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATVV--NLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFTNRLY-------PKQTPHWTNIRNNLKKTCP 715
            LS +FYD++CP++  I    I+ AL+ D  +AA ++R+HFHDCFV GCD S+LL+ +TS +  +      + A  F  +D ++A V K C + VSCAD+LA+AA+ SV L+GGP++ +P GRRDS + F  +   NLP P S   V+ + FR    +   + VALSGGHT G   C    +RLY       P  T   + + + L+K CP
Sbjct:   26 LSPSFYDKTCPQVFDIATNTIKTALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNARSARGFDVIDTMKAAVEKACPKTVSCADLLAIAAQKSVVLAGGPSWKVPSGRRDSLRGFMDLANDNLPGPSSTLQVLKDKFRNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNSGKPDPTLDKSYL-STLRKQCP 234          
BLAST of CX291370 vs. ExPASy Swiss-Prot
Match: PER33_ARATH (Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.281e-35
Identity = 86/210 (40.95%), Postives = 123/210 (58.57%), Query Frame = 2
Query:  125 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKF--VDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATV--VNLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFTNRLY-------PKQTPHWTNIRNNLKKTCP 715
            L+ TFYD SCP + +IVR  I N L+ D  +A  ++R+HFHDCFV GCD S+LL+ +TS +  +  L     A  F  +D ++A V + C R VSCAD+L +AA+ SV L+GGP++ +PLGRRDS + F  +   NLP+PF     +  +F+    +   + VALSG HT G   C    +RLY       P  T + T ++  L+  CP
Sbjct:   33 LTPTFYDTSCPTVTNIVRDTIVNELRSDPRIAGSILRLHFHDCFVNGCDASILLDNTTSFRTEKDALGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWKVPLGRRDSLQAFLDLANANLPAPFFTLPQLKANFKNVGLDRPSDLVALSGAHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQ-TLRGQCP 241          
BLAST of CX291370 vs. ExPASy Swiss-Prot
Match: PER68_ARATH (Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.591e-35
Identity = 82/181 (45.30%), Postives = 112/181 (61.88%), Query Frame = 2
Query:  137 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKT--FATVVN--LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 658
            FY  SCP L   VR+ +Q  + K+  +AA L+R+ FHDCFV GCD S+LL+ + S   E+ A PN +      + +D +++RV + C  VVSCADILA+ ARDSV L GG  + + LGRRDS T  F+T  +  LP P S    ++N FR    + R+ VALSG HT+G A C  F +R+Y
Sbjct:   34 FYSDSCPSLLPTVRRVVQREVAKERRIAASLLRLFFHDCFVNGCDASILLDDTRSFLGEKTAGPN-NNSVRGYEVIDAIKSRVERLCPGVVSCADILAITARDSVLLMGGRGWSVKLGRRDSITASFSTANSGVLPPPTSTLDNLINLFRANGLSPRDMVALSGAHTIGQARCVTFRSRIY 213          
BLAST of CX291370 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 7.301e-35
Identity = 85/210 (40.48%), Postives = 120/210 (57.14%), Query Frame = 2
Query:  125 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGST---SEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKT---FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-------PKQTPHWTNIRNNLKKTCP 715
            L+ TFY  +CP   +IVR  IQ AL+ D  +   LIR+HFHDCFV GCDGS+LL+ ++   SE+NA  N +  +     VD ++  +   C  +VSC+DILALA+  SV+L+GGP++ + LGRRD  T        +LPSPF     I + F        + V+LSG HT G   C  F NRL+       P  T + T + ++L++ CP
Sbjct:   33 LNATFYSGTCPNASAIVRSTIQQALQSDARIGGSLIRLHFHDCFVNGCDGSLLLDDTSSIQSEKNAPANANSTR-GFNVVDSIKTALENACPGIVSCSDILALASEASVSLAGGPSWTVLLGRRDGLTANLSGANSSLPSPFEGLNNITSKFVAVGLKTTDVVSLSGAHTFGRGQCVTFNNRLFNFNGTGNPDPTLNST-LLSSLQQLCP 240          
BLAST of CX291370 vs. ExPASy Swiss-Prot
Match: PER2_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 9.536e-35
Identity = 83/200 (41.50%), Postives = 116/200 (58.00%), Query Frame = 2
Query:  125 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKT---FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQTPHWTNIRNNLKKTCP 715
            LS TFYD +CP   S +R  I++++  +   AA +IR+ FHDCFVQGCD S+LL G+ SE+ +  N  +     + +D  +A V + C  VVSCADILA+AARD+    GGP++ + LGRRDS T        +LP      + ++++F  K  N RE VALSG HT+G A C  F  R+Y        N   +L + CP
Sbjct:   32 LSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLSGAGSERASPANDGVL--GYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTREMVALSGSHTLGQARCIRFRGRIYNSTLRIEPNFNRSLSQACP 229          
BLAST of CX291370 vs. ExPASy Swiss-Prot
Match: PER1_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 9.536e-35
Identity = 83/200 (41.50%), Postives = 116/200 (58.00%), Query Frame = 2
Query:  125 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKT---FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQTPHWTNIRNNLKKTCP 715
            LS TFYD +CP   S +R  I++++  +   AA +IR+ FHDCFVQGCD S+LL G+ SE+ +  N  +     + +D  +A V + C  VVSCADILA+AARD+    GGP++ + LGRRDS T        +LP      + ++++F  K  N RE VALSG HT+G A C  F  R+Y        N   +L + CP
Sbjct:   32 LSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLSGAGSERASPANDGVL--GYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTREMVALSGSHTLGQARCIRFRGRIYNSTLRIEPNFNRSLSQACP 229          
BLAST of CX291370 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.124e-34
Identity = 87/202 (43.07%), Postives = 115/202 (56.93%), Query Frame = 2
Query:  125 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNL-SLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS---KTFATVVNLPSPFSNTTVILNDFREK-TFNARETVALSGGHTVGLAHCPAFTNRLYPKQTPHWTNIRNNLKKTCP 715
            LS TFYD SCP+  + ++  +  A+  D  + A L+R+HFHDCFVQGCD SVLL G   EQNA PN  SLR      +D ++ ++   C + VSCADIL +AARDSV   GGP++ +PLGRRDS          +LP   S+   +   F +K   N  + VALSG HT+G A C  F  R+Y   T        +L+  CP
Sbjct:   23 LSPTFYDTSCPRALATIKSGVMAAVTSDPRMGASLLRLHFHDCFVQGCDASVLLSG--MEQNAIPNAGSLR--GFGVIDSIKTQIEAICKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSIDANENEANTDLPGFNSSRAELEAAFLKKGGLNTVDMVALSGAHTIGQAQCSTFRARIYGGDTNINAAYAASLRANCP 220          
The following BLAST results are available for this feature:
BLAST of CX291370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER37_ARATH1.471e-3540.95Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PER1C_ARMRU1.921e-3541.90Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PERN1_TOBAC2.509e-3540.76Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S... [more]
PER2_ARMRU2.509e-3540.95Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]
PER33_ARATH4.281e-3540.95Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=... [more]
PER68_ARATH5.591e-3545.30Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=... [more]
PER54_ARATH7.301e-3540.48Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER2_ZINEL9.536e-3541.50Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV... [more]
PER1_ZINEL9.536e-3541.50Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV... [more]
PER1_HORVU2.124e-3443.07Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC03007C01SK OF2 Citrus clementina cDNA clone C03007C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291370 ID=CX291370; Name=CX291370; organism=Citrus clementina; type=EST; length=755bp
GTAATCAACAATGGCAACTGCTTCAGCTTCTTCTTTCATTTCTCTTCTTT
TGATATCTTCTCTTTTGCTTGCTTCTTTATCCTCTTCTTTCACTGAGGCA
CAAAAGCCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCAGAG
CTGTCCCAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCCTGA
AAAAAGATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCATGAT
TGCTTCGTTCAGGGATGTGATGGATCAGTGTTGCTAGAGGGATCAACTAG
TGAGCAAAATGCACGTCCAAACCTAAGCTTAAGGAAAGAGGCTTTAAAAT
TTGTAGACGAACTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTTGTT
TCTTGCGCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTGTC
TGGAGGGCCGAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAACAT
TCGCAACAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGATC
CTCAACGATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCCCT
CTCCGGCGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTTACCAATC
GCCTCTATCCCAAACAGACCCCACACTGGACAAACATTCGCAACAATCTC
AAAAAGACATGCCCACTTCGGATTCCAACACACCACGTCTTCGACATCCG
GTCCC
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