CX291398

Overview
NameCX291398
Unique NameCX291398
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length674
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291398 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.205e-11
Identity = 51/152 (33.55%), Postives = 71/152 (46.71%), Query Frame = 2
Query:  194 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 649
            EL   SF+RA+ AEF A            +G   +  P         + +L +A AFG  +  LV     ISG H+NPAVTF   +  ++SL+RA+ Y+VAQ LGA++G  ++ +       R     N L  G S G     EI  T   V
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAPGP-------LHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPP-AVRGNLALNTLHPGVSVGQATIVEIFLTLQFV 142          
BLAST of CX291398 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.574e-11
Identity = 52/153 (33.99%), Postives = 75/153 (49.02%), Query Frame = 2
Query:  194 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAG-VGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 649
            E T     +A +AEFI+            I Y   T+     DG A   G++  + A    +FV V   A ISGGH+NPAV FG F+   ++L+R ++Y++AQ LG+I    L+     S    +G     L++G   G  L  EI+ TF LV
Sbjct:   13 EATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLTN-----DGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAV-FGAFVGGNITLLRGIVYIIAQLLGSIVCSALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLV 154          
BLAST of CX291398 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.056e-11
Identity = 51/152 (33.55%), Postives = 69/152 (45.39%), Query Frame = 2
Query:  194 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 649
            EL   SF+RA+ AEF A            +G   +  P         + +L +A AFG  +  LV     ISG H+NPAVTF   +  ++SL+RA  YM AQ LGA++G  ++ +       R     N L  G S G     EI  T   V
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWTPGP-------LHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPP-AVRGNLALNTLHPGVSVGQATTVEIFLTLQFV 142          
BLAST of CX291398 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.507e-11
Identity = 48/151 (31.79%), Postives = 70/151 (46.36%), Query Frame = 2
Query:  194 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVL 646
            E+   +F +A+ AEF+A            + + S               IL IA AFG  I  L      +SGGHINPA+T  L +  ++SL+RA  Y+ AQ +GAI+G G++         R     N L +  + G  +  E+I TF L
Sbjct:    4 EVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPT-----------ILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGV-APLNARGNLAVNALNNNTTQGQAMVVELILTFQL 142          
BLAST of CX291398 vs. ExPASy Swiss-Prot
Match: AQPZ1_AGRT5 (Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.580e-11
Identity = 48/118 (40.68%), Postives = 61/118 (51.69%), Query Frame = 2
Query:  332 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGA-ISGVGLVKAFQKSYYTRYGG-GANELAD----GYSTGVGLAAEIIGT--FVLV*LSS 661
            G+G LG+A+AFG  +  + Y   GISGGH NPAV+ GL +A K      V Y+VAQ LGA ++   L            GG  AN   +    GYS    L  EII T  F++V L S
Sbjct:   33 GIGFLGVAFAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGKFPAANLVPYIVAQVLGAVVAAAALYVILTGKAGAEIGGFAANGYGEHSPGGYSLLSALLIEIILTAFFLVVILGS 150          
BLAST of CX291398 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.982e-11
Identity = 47/144 (32.64%), Postives = 66/144 (45.83%), Query Frame = 2
Query:  218 RALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 649
            +A +AEFIA            I Y   T  A         G++ +A A    +FV V   A +SGGH+NPAVT GL +   ++++  + Y +AQCLG+     L+K           G    +A G     G+  EII TF LV
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYNKLTSDA----ALDPAGLVAVAVAHAFALFVGVSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLKFVTNGLSVPTHG----VAAGMDAIQGVVMEIIITFALV 154          
BLAST of CX291398 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.982e-11
Identity = 49/148 (33.11%), Postives = 67/148 (45.27%), Query Frame = 2
Query:  218 RALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGAN----ELADGYSTGVGLAAEIIGTFVLV 649
            RA I+EFIA            +           +    G+  + +A A G  + V V     +SGGH+NPAVTFG  +  +VSLVRAV+Y  AQ LGA++   L++           GGA      LA G   G  +  E + TF  V
Sbjct:   28 RAAISEFIATAIFVFAAEGSVLSLGKMYHDHSTISTAGGLVAVALAHALG--LAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLRLAT--------GGARPPGFALASGVGDGHAVLLEAVMTFGFV 165          
The following BLAST results are available for this feature:
BLAST of CX291398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
MIP_SHEEP1.205e-1133.55Lens fiber major intrinsic protein OS=Ovis aries G... [more]
TIP1_MEDSA1.574e-1133.99Probable aquaporin TIP-type OS=Medicago sativa GN=... [more]
MIP_CANFA2.056e-1133.55Lens fiber major intrinsic protein OS=Canis famili... [more]
AQP5_HUMAN3.507e-1131.79Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]
AQPZ1_AGRT54.580e-1140.68Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain... [more]
TIP_ANTMA5.982e-1132.64Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
TIP32_MAIZE5.982e-1133.11Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC03007E05SK OF2 Citrus clementina cDNA clone C03007E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291398 ID=CX291398; Name=CX291398; organism=Citrus clementina; type=EST; length=674bp
AAGAAAAAGAAAAAGGAAAAGGCTTCTCTCTCGTTGTGCTTGTGGCTTTG
CAGTGCTCTCAGTTTTCTCTGTTTCTCTCCAAATCATTGTTACTGGTTTT
CCAATGGCGAAGGACACTGGGGTGGCAGAGCACGGCTCATATTCAGCCAA
GGACTACACGGACCCACCGCCGGAGCCGCTATTCGACGCCGTGGAGCTGA
CCAAATGGTCATTCTACAGAGCCTTGATAGCTGAGTTCATAGCAACCCTG
CTCTTTCTTTACGTCACTGTCTTGACTGTCATTGGCTACAAAAGCCAGAC
CGATCCCGCCAAGAACGTCGACGGCTGTGCCGGCGTCGGCATCCTCGGCA
TCGCCTGGGCCTTCGGTGGCATGATCTTTGTCCTCGTTTACTGCACCGCC
GGTATCTCAGGTGGTCACATTAACCCGGCAGTGACGTTCGGACTATTCTT
GGCCCGCAAGGTGTCGTTGGTCCGTGCTGTGATGTACATGGTGGCGCAGT
GCCTTGGTGCTATCTCCGGTGTTGGGTTGGTCAAGGCTTTCCAAAAATCT
TACTACACAAGGTACGGAGGTGGGGCCAACGAGCTGGCCGATGGGTACAG
CACCGGCGTTGGATTGGCCGCCGAGATCATCGGCACCTTTGTCTTGGTTT
AACTGTCTTCTCGGCCACTGATCC
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