CX291464
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_LACSA (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Lactuca sativa GN=ndhA PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.038e-48 Identity = 97/105 (92.38%), Postives = 100/105 (95.24%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFL 670 LSNS STVDIV AQSKYGFWGWNLWRQPIGF+VFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG NLSI Y+F+ Sbjct: 185 LSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNLSI-PYIFV 288
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_DRIGR (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Drimys granadensis GN=ndhA PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.038e-48 Identity = 96/105 (91.43%), Postives = 100/105 (95.24%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFL 670 LSNS ST+DIV AQSKYGFWGWNLWRQPIGFIVF+ISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG NLSI Y+F+ Sbjct: 185 LSNSSSTIDIVEAQSKYGFWGWNLWRQPIGFIVFIISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNLSI-PYIFI 288
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_CRUWA (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Crucihimalaya wallichii GN=ndhA PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.038e-48 Identity = 93/99 (93.94%), Postives = 97/99 (97.98%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LSNSLSTVDIV AQSKYGFWGWNLWRQPIGFI+FLISSLAECERLPFDLPEAEEEL+AGYQTEYSGIKFGLFYVASYLNLL+SSLFVTVLYLGG N+SI Sbjct: 185 LSNSLSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEELIAGYQTEYSGIKFGLFYVASYLNLLISSLFVTVLYLGGWNISI 283
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_BARVE (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Barbarea verna GN=ndhA PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.038e-48 Identity = 93/99 (93.94%), Postives = 97/99 (97.98%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LSNSLSTVDIV AQSKYGFWGWNLWRQPIGFI+FLISSLAECERLPFDLPEAEEEL+AGYQTEYSGIKFGLFYVASYLNLL+SSLFVTVLYLGG N+SI Sbjct: 185 LSNSLSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEELIAGYQTEYSGIKFGLFYVASYLNLLISSLFVTVLYLGGWNISI 283
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_ACOCL (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Acorus calamus GN=ndhA PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.038e-48 Identity = 96/105 (91.43%), Postives = 100/105 (95.24%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFL 670 LSNS STVDIV AQSKYGFWGWNLWRQPIGF+VFL+SSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG NLSI Y+F+ Sbjct: 187 LSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFLVFLVSSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNLSI-PYIFI 290
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_AETCO (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Aethionema cordifolium GN=ndhA PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.355e-48 Identity = 93/99 (93.94%), Postives = 97/99 (97.98%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LSNSLSTVDIV AQSKYGFWGWNLWRQPIGFI+FLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLL+SSLFVTVLYLGG N+S+ Sbjct: 185 LSNSLSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLISSLFVTVLYLGGWNISL 283
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_PANGI (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Panax ginseng GN=ndhA PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.770e-48 Identity = 95/99 (95.96%), Postives = 96/99 (96.97%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LSNS STVDIV AQSKYGFWGWNLWRQPIGFI+FLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG NLSI Sbjct: 185 LSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNLSI 283
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_EUCGG (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=ndhA PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.770e-48 Identity = 96/111 (86.49%), Postives = 101/111 (90.99%), Query Frame = 2 Query: 338 CYHRL*LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFL 670 C + LSNS STVDIV AQSKYGFWGWNLWRQPIGF +FLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG N+SI Y+F+ Sbjct: 179 CVINISLSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFFIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNISI-PYIFV 288
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_CAPBU (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Capsella bursa-pastoris GN=ndhA PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.770e-48 Identity = 93/99 (93.94%), Postives = 96/99 (96.97%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LSNSLSTVDIV AQSKYGFWGWNLWRQPIGFI+FLISSLAECERLPFDLPEAEEEL+AGYQTEYSGIKFGLFYVASYLNLL+SSLFVTVLYLGG N SI Sbjct: 185 LSNSLSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEELIAGYQTEYSGIKFGLFYVASYLNLLISSLFVTVLYLGGWNFSI 283
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_CALFG (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Calycanthus floridus var. glaucus GN=ndhA PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.770e-48 Identity = 97/105 (92.38%), Postives = 99/105 (94.29%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFL 670 LSNS STVDIV AQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG NL I Y+F+ Sbjct: 185 LSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNLPI-PYIFI 288 The following BLAST results are available for this feature:
BLAST of CX291464 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291464 ID=CX291464; Name=CX291464; organism=Citrus clementina; type=EST; length=707bpback to top |