CX291464
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_VITVI (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Vitis vinifera GN=ndhA PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.312e-48 Identity = 97/105 (92.38%), Postives = 100/105 (95.24%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFL 670 LSNS STVDIV AQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG +LSI Y+F+ Sbjct: 185 LSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWDLSI-PYIFV 288
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_MORIN (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Morus indica GN=ndhA PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.312e-48 Identity = 94/105 (89.52%), Postives = 100/105 (95.24%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFL 670 LSNS STVDIV AQSKYGFWGWNLWRQPIGFI+FLISSLAECERLPFDLPEAEEEL+AGYQTEYSGIKFGLFYVASYLNLLVSSLFVT+LYLGG N+SI Y+F+ Sbjct: 185 LSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEELIAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTILYLGGWNISI-PYIFV 288
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_HELAN (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Helianthus annuus GN=ndhA PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.312e-48 Identity = 95/99 (95.96%), Postives = 96/99 (96.97%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LSNS STVDIV AQSKYGFWGWNLWRQPIGF+VFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG NLSI Sbjct: 185 LSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNLSI 283
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_DAUCA (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Daucus carota GN=ndhA PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.312e-48 Identity = 95/99 (95.96%), Postives = 96/99 (96.97%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LSNS STVDIV AQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG NLS+ Sbjct: 185 LSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNLSL 283
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_ARAHI (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Arabis hirsuta GN=ndhA PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.312e-48 Identity = 91/99 (91.92%), Postives = 97/99 (97.98%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LSNSLSTVDIV AQSKYGFWGWNLWRQPIGFI+FLISSLAECERLPFDLPEAEEEL+AGYQTEYSGIKFGLFYVASY+NLL+SSLFVT+LYLGG N+SI Sbjct: 185 LSNSLSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEELIAGYQTEYSGIKFGLFYVASYINLLISSLFVTILYLGGWNISI 283
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_NUPAD (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Nuphar advena GN=ndhA PE=3 SV=2) HSP 1 Score: 191.815 bits (486), Expect = 3.019e-48 Identity = 94/99 (94.95%), Postives = 96/99 (96.97%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LSNS STVDIV AQSKYGFWGWNLWRQPIGFIVF+ISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVT+LYLGG NLSI Sbjct: 183 LSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFIVFIISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTILYLGGWNLSI 281
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_DRANE (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Draba nemorosa GN=ndhA PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.019e-48 Identity = 91/99 (91.92%), Postives = 97/99 (97.98%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LSNSLSTVDIV AQSKYGFWGWNLWRQPIGFI+FLISSLAECERLPFDLPEAEEEL+AGYQTEYSGIKFGLFYVASYLNLL+S+LFVT+LYLGG N+SI Sbjct: 185 LSNSLSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEELIAGYQTEYSGIKFGLFYVASYLNLLISALFVTILYLGGWNISI 283
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_GOSHI (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Gossypium hirsutum GN=ndhA PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.943e-48 Identity = 96/104 (92.31%), Postives = 99/104 (95.19%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLF 667 LSNS STVDIV AQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLL+SSLFVTVLYLGG N+SI Y+F Sbjct: 185 LSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLLSSLFVTVLYLGGWNISI-PYVF 287
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_OENEH (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Oenothera elata subsp. hookeri GN=ndhA PE=3 SV=2) HSP 1 Score: 191.045 bits (484), Expect = 5.150e-48 Identity = 95/105 (90.48%), Postives = 100/105 (95.24%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFL 670 LSNS STVDIV AQSKYG WGWNLWRQPIGF+VFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG N+SI +Y+F+ Sbjct: 185 LSNSSSTVDIVEAQSKYGLWGWNLWRQPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNISI-SYIFV 288
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_GOSBA (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Gossypium barbadense GN=ndhA PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.147e-47 Identity = 94/104 (90.38%), Postives = 99/104 (95.19%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLF 667 LSNS ST+DIV AQSKYG+WGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLL+SSLFVTVLYLGG N+SI Y+F Sbjct: 185 LSNSSSTIDIVEAQSKYGYWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLLSSLFVTVLYLGGWNISI-PYVF 287 The following BLAST results are available for this feature:
BLAST of CX291464 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291464 ID=CX291464; Name=CX291464; organism=Citrus clementina; type=EST; length=707bpback to top |