CX291464
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_PIPCE (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Piper cenocladum GN=ndhA PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.498e-47 Identity = 94/105 (89.52%), Postives = 98/105 (93.33%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI-HTYLF 667 LSNSLST+DIV QSKYG WGWNLWRQP+GFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLY GG NLSI +T +F Sbjct: 185 LSNSLSTIDIVEVQSKYGIWGWNLWRQPVGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYFGGWNLSIPYTSIF 289
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_ORYSJ (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Oryza sativa subsp. japonica GN=ndhA PE=2 SV=2) HSP 1 Score: 189.504 bits (480), Expect = 1.498e-47 Identity = 94/109 (86.24%), Postives = 100/109 (91.74%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLGWLK 682 LSNSLSTVDIV AQSKYGF+GWNLWRQPIGF+VFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIK+GLFY+ SYLNLLVSSLFVTVLYLGG NLSI F G+ + Sbjct: 184 LSNSLSTVDIVEAQSKYGFFGWNLWRQPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLLVSSLFVTVLYLGGWNLSIPYISFFGFFQ 292
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_ORYSI (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Oryza sativa subsp. indica GN=ndhA PE=2 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.498e-47 Identity = 94/109 (86.24%), Postives = 100/109 (91.74%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLGWLK 682 LSNSLSTVDIV AQSKYGF+GWNLWRQPIGF+VFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIK+GLFY+ SYLNLLVSSLFVTVLYLGG NLSI F G+ + Sbjct: 184 LSNSLSTVDIVEAQSKYGFFGWNLWRQPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLLVSSLFVTVLYLGGWNLSIPYISFFGFFQ 292
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_ORYSA (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Oryza sativa GN=ndhA PE=2 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.498e-47 Identity = 94/109 (86.24%), Postives = 100/109 (91.74%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLGWLK 682 LSNSLSTVDIV AQSKYGF+GWNLWRQPIGF+VFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIK+GLFY+ SYLNLLVSSLFVTVLYLGG NLSI F G+ + Sbjct: 184 LSNSLSTVDIVEAQSKYGFFGWNLWRQPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLLVSSLFVTVLYLGGWNLSIPYISFFGFFQ 292
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_ORYNI (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Oryza nivara GN=ndhA PE=2 SV=2) HSP 1 Score: 189.504 bits (480), Expect = 1.498e-47 Identity = 94/109 (86.24%), Postives = 100/109 (91.74%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLGWLK 682 LSNSLSTVDIV AQSKYGF+GWNLWRQPIGF+VFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIK+GLFY+ SYLNLLVSSLFVTVLYLGG NLSI F G+ + Sbjct: 184 LSNSLSTVDIVEAQSKYGFFGWNLWRQPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLLVSSLFVTVLYLGGWNLSIPYISFFGFFQ 292
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_NYMAL (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Nymphaea alba GN=ndhA PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.498e-47 Identity = 93/99 (93.94%), Postives = 95/99 (95.96%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LSNS STVDIV AQSKYGFWGWNLWRQPIGF+VF+ISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG NL I Sbjct: 183 LSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFLVFIISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNLPI 281
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_CUCSA (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis sativus GN=ndhA PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.498e-47 Identity = 92/99 (92.93%), Postives = 96/99 (96.97%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LSNS STVDIV AQSKYGFWGWNLWRQPIGF++FLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG ++SI Sbjct: 185 LSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWDISI 283
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_ATRBE (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Atropa belladonna GN=ndhA PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.556e-47 Identity = 96/105 (91.43%), Postives = 99/105 (94.29%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFL 670 LSNS STVDIV AQSKYGF GWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFY+ASYLNLLVSSLFVTVLYLGG NLSI Y+F+ Sbjct: 185 LSNSSSTVDIVEAQSKYGFLGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYIASYLNLLVSSLFVTVLYLGGWNLSI-PYIFV 288
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_RANMC (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Ranunculus macranthus GN=ndhA PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.338e-47 Identity = 93/99 (93.94%), Postives = 94/99 (94.95%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LSNS STVDIV AQ+KYGFWGWNLWRQPIGF VF ISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG NLSI Sbjct: 185 LSNSSSTVDIVEAQAKYGFWGWNLWRQPIGFTVFFISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNLSI 283
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_SACOF (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Saccharum officinarum GN=ndhA PE=2 SV=2) HSP 1 Score: 187.963 bits (476), Expect = 4.359e-47 Identity = 93/109 (85.32%), Postives = 99/109 (90.83%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLGWLK 682 LSNSLSTVDIV AQSKYGF+GWNLWRQPIGF+VFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIK+GLFY+ SYLNLLVSSLFVTVLYLGG N SI F G+ + Sbjct: 184 LSNSLSTVDIVEAQSKYGFFGWNLWRQPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLLVSSLFVTVLYLGGWNFSIPYISFFGFFQ 292 The following BLAST results are available for this feature:
BLAST of CX291464 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX291464 ID=CX291464; Name=CX291464; organism=Citrus clementina; type=EST; length=707bpback to top |