CX291464
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NUOH_BURCA (NADH-quinone oxidoreductase subunit H OS=Burkholderia cenocepacia (strain AU 1054) GN=nuoH PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13 Identity = 40/101 (39.60%), Postives = 61/101 (60.40%), Query Frame = 2 Query: 359 SNSLSTVDIVVAQSKYGFWG--------WNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 637 + SL+ +IV +Q ++GF+ WN F+V+ IS +AE R PFD+ E E E+VAG+ +YSG+ F LF++A Y+N++V S L+LGG Sbjct: 181 AGSLNLSEIVGSQ-QHGFFAGHGVNFLSWNWLPLLPAFVVYFISGIAETNRHPFDVVEGESEIVAGHMIDYSGMAFALFFLAEYINMIVISALAATLFLGG 280
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NUOH_BORA1 (NADH-quinone oxidoreductase subunit H OS=Bordetella avium (strain 197N) GN=nuoH PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13 Identity = 39/103 (37.86%), Postives = 64/103 (62.14%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGF---------WGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 637 +S SL+ +IV+ Q + F W W L P+ F++++IS++AE R PFD+ E E E+VAG+ EYSG+ F LF++ Y N+++ S ++++LGG Sbjct: 181 VSGSLNMNEIVLGQGRGWFAERGLTFLSWNW-LPLLPL-FVIYVISAVAETNRHPFDVVEGESEIVAGHMVEYSGMAFALFFLGEYANMILLSAMASIMFLGG 281
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NUOH_BURVG (NADH-quinone oxidoreductase subunit H OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=nuoH PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13 Identity = 39/101 (38.61%), Postives = 61/101 (60.40%), Query Frame = 2 Query: 359 SNSLSTVDIVVAQSKYGFWG--------WNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 637 + SL+ +IV +Q ++GF+ WN F+V+ +S +AE R PFD+ E E E+VAG+ +YSG+ F LF++A Y+N++V S L+LGG Sbjct: 181 AGSLNLSEIVGSQ-QHGFFAGHGVNFLSWNWLPLLPAFVVYFVSGIAETNRHPFDVVEGESEIVAGHMIDYSGMAFALFFLAEYINMIVISALAATLFLGG 280
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NUOH_BURCM (NADH-quinone oxidoreductase subunit H OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=nuoH PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13 Identity = 39/101 (38.61%), Postives = 61/101 (60.40%), Query Frame = 2 Query: 359 SNSLSTVDIVVAQSKYGFWG--------WNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 637 + SL+ +IV +Q ++GF+ WN F+V+ +S +AE R PFD+ E E E+VAG+ +YSG+ F LF++A Y+N++V S L+LGG Sbjct: 181 AGSLNLSEIVGSQ-QHGFFAGHGVNFLSWNWLPLLPAFVVYFVSGIAETNRHPFDVVEGESEIVAGHMIDYSGMAFALFFLAEYINMIVISALAATLFLGG 280
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NUOH_BURA4 (NADH-quinone oxidoreductase subunit H OS=Burkholderia ambifaria (strain MC40-6) GN=nuoH PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13 Identity = 39/101 (38.61%), Postives = 61/101 (60.40%), Query Frame = 2 Query: 359 SNSLSTVDIVVAQSKYGFWG--------WNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 637 + SL+ +IV +Q ++GF+ WN F+V+ +S +AE R PFD+ E E E+VAG+ +YSG+ F LF++A Y+N++V S L+LGG Sbjct: 181 AGSLNLSEIVGSQ-QHGFFAGHGVNFLSWNWLPLLPAFVVYFVSGIAETNRHPFDVVEGESEIVAGHMIDYSGMAFALFFLAEYINMIVISALAATLFLGG 280
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1M_METSE (NADH-ubiquinone oxidoreductase chain 1 OS=Metridium senile GN=ND1 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13 Identity = 39/91 (42.86%), Postives = 61/91 (67.03%), Query Frame = 2 Query: 365 SLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 637 SL+ +IV+AQS ++ + L+ P+ ++F S+LAE R PFDL E E ELV+GY EY+ + F LF++A Y ++++ S T+L+LGG Sbjct: 174 SLNITEIVLAQSSGIWFFFPLF--PVA-MMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFLGG 261
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NUOH_FRAP2 (NADH-quinone oxidoreductase subunit H OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=nuoH PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.379e-13 Identity = 33/93 (35.48%), Postives = 58/93 (62.37%), Query Frame = 2 Query: 359 SNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 637 + S+ I+ +Q+ G W W F+V+ I+ +AE R PFD+ E E E++AG+ EY+G +F LF++A Y N+++ S+ ++++LGG Sbjct: 165 AGSMGITGIIESQAG-GLWHWYFIPLFPLFVVYFIAGIAETNRAPFDVVEGESEIIAGHHIEYTGSRFALFFLAEYANMILISILTSIMFLGG 256
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NUOH_BURPP (NADH-quinone oxidoreductase subunit H OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=nuoH PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.379e-13 Identity = 40/100 (40.00%), Postives = 59/100 (59.00%), Query Frame = 2 Query: 359 SNSLSTVDIVVAQ-----SKYG--FWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 637 + +L+ IV +Q + YG F WN F+V+ IS +AE R PFD+ E E E+VAG+ +YSG+ F LF++A Y+N++V S L+LGG Sbjct: 181 AGTLNLSGIVASQEHGIFASYGLNFLSWNWLPLLPMFVVYFISGIAETNRHPFDVVEGESEIVAGHMIDYSGMAFALFFLAEYINMIVISALAATLFLGG 280
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NUOH_ALHEH (NADH-quinone oxidoreductase subunit H OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=nuoH PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.379e-13 Identity = 42/106 (39.62%), Postives = 63/106 (59.43%), Query Frame = 2 Query: 359 SNSLSTVDIVVAQSKYGF-WGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLG 673 + S++ I+ AQ+ F W W L P+ F+V+ IS +AE R PFD+ E E E+VAG+ EYSG F +F++A Y N+++ S V++LGG H + LG Sbjct: 167 AGSMNLGQIIQAQAGGIFHWFW-LPLLPL-FLVYWISGVAETNRAPFDVAEGESEIVAGFHVEYSGTSFAVFFLAEYANMILISAVAAVMFLGGWYSPFHGWPILG 270
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NUOH_HALHL (NADH-quinone oxidoreductase subunit H OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=nuoH PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13 Identity = 34/77 (44.16%), Postives = 49/77 (63.64%), Query Frame = 2 Query: 410 FWGWNLWRQPIG-FIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 637 FW W W + F+++ IS +AE R PFD+ E E E+VAG+ EYSG+ F +F++A Y N+L+ S L+LGG Sbjct: 181 FWEW-FWLPLLPLFLIYWISGVAETNRAPFDIAEGESEIVAGFHVEYSGMAFAVFFLAEYANMLLISFLAATLFLGG 256 The following BLAST results are available for this feature:
BLAST of CX291464 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291464 ID=CX291464; Name=CX291464; organism=Citrus clementina; type=EST; length=707bpback to top |