CX291464
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1M_RANCA (NADH-ubiquinone oxidoreductase chain 1 OS=Rana catesbeiana GN=MT-ND1 PE=3 SV=3) HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12 Identity = 36/89 (40.45%), Postives = 57/89 (64.04%), Query Frame = 2 Query: 446 FIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG--SNLSIHTYLFLGWLK*ISGWNLW 706 F+++ +S+LAE R PFDL E E ELV+G+ EY+G F LF++A Y N+L+ + T+++LG S+L++ T L + +S LW Sbjct: 186 FLMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTIIFLGSCMSSLTLTTSLLMTKASILSLCFLW 274
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NUOH_PSEE4 (NADH-quinone oxidoreductase subunit H OS=Pseudomonas entomophila (strain L48) GN=nuoH PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.947e-12 Identity = 33/75 (44.00%), Postives = 47/75 (62.67%), Query Frame = 2 Query: 422 NLW---RQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 637 NLW Q GF F I+ +A R PFD PEAE+EL GY EY+G+K+G+F+V Y+ +++ S + L+ GG Sbjct: 186 NLWFIIPQFFGFCTFFIAGVAVTHRHPFDQPEAEQELADGYHIEYAGMKWGMFFVGEYIGIILISALLVTLFFGG 260
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NUOH_PARDP (NADH-quinone oxidoreductase subunit H OS=Paracoccus denitrificans (strain Pd 1222) GN=nuoH PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.947e-12 Identity = 43/108 (39.81%), Postives = 61/108 (56.48%), Query Frame = 2 Query: 359 SNSLSTVDIVVAQ-SKYGFWGWNLWRQPIGFIV-FLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLGW 676 + S++ IV AQ YG W W + +V F +S+LAEC R PFDL EAE ELVAG+ TEYS + LF Y+ + + +++L+ GG LS ++ GW Sbjct: 172 TGSMNLTAIVEAQRGDYGLLNW-YWLPHLPMVVLFFVSALAECNRPPFDLVEAESELVAGFMTEYSSTPYLLFMAGEYIAMYLMCALLSLLFFGGW-LSPVPFIADGW 277
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NUOH_MESSB (NADH-quinone oxidoreductase subunit H OS=Mesorhizobium sp. (strain BNC1) GN=nuoH PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.947e-12 Identity = 43/102 (42.16%), Postives = 60/102 (58.82%), Query Frame = 2 Query: 365 SLSTVDIVVAQ-----------SKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 637 SL+ DIV++Q + + W W L P+ FI+F IS+LAE R PFDL EAE ELVAG+ EYS F LF++ Y+ +++ T+L+LGG Sbjct: 174 SLNLTDIVLSQRDGLGTMVGLPNSFLDWHW-LALFPM-FIIFFISALAETNRPPFDLVEAESELVAGHMIEYSSTPFLLFFLGEYVAIVLMCALTTILFLGG 273
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1M_CHLRE (NADH-ubiquinone oxidoreductase chain 1 OS=Chlamydomonas reinhardtii GN=ND1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.947e-12 Identity = 36/77 (46.75%), Postives = 50/77 (64.94%), Query Frame = 2 Query: 449 IVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLGWL 679 ++FL+ LAE +R PFDLPEAE LVAGY EYS + F LF++A Y N+ V S ++ +LGG + T LF ++ Sbjct: 180 LIFLVCILAETKRDPFDLPEAE--LVAGYNVEYSSLGFALFFIAEYANMAVMSAIASIYFLGGFSALKITALFFAFV 254
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NUOH_BART1 (NADH-quinone oxidoreductase subunit H OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=nuoH PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.767e-12 Identity = 41/104 (39.42%), Postives = 56/104 (53.85%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSK----------YGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 637 +S SL IV+ Q + F WN FI+F IS+LAE R PFDL EAE ELVAG+ EYS + LF++ Y+ +++ T+L+LGG Sbjct: 171 ISGSLDLTTIVLKQGQGLGTTLGLPFNSFLDWNWLVLFPMFIIFFISALAETNRPPFDLVEAESELVAGHMVEYSSTPYMLFFLGEYVAIVLMCALTTILFLGG 274
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NUOH_BARQU (NADH-quinone oxidoreductase subunit H OS=Bartonella quintana GN=nuoH PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.767e-12 Identity = 44/105 (41.90%), Postives = 57/105 (54.29%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYG-----------FWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 637 +S SL IV QS YG F WN FI+F IS+LAE R PFDL EAE ELVAG+ EYS + LF++ Y+ +++ T+L+LGG Sbjct: 171 VSGSLDLTTIVHKQS-YGIGTTLGFPFNSFLDWNWLVLFPMFIIFFISALAETNRPPFDLVEAESELVAGHMVEYSSTPYMLFFLGEYVAIVLMCALTTILFLGG 274
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NUOH_AGRRK (NADH-quinone oxidoreductase subunit H OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=nuoH PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.767e-12 Identity = 44/102 (43.14%), Postives = 59/102 (57.84%), Query Frame = 2 Query: 365 SLSTVDIVVAQ-----SKYGF------WGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 637 SL+ DIV++Q +K G W W L P+ FIVF IS+LAE R PFDLPEAE ELVAG+ EY + +F + Y +++ T+L+LGG Sbjct: 174 SLNLTDIVMSQQTGLGTKLGLPASFLDWHW-LSLFPM-FIVFFISALAETNRPPFDLPEAESELVAGFMVEYGSAPYMMFMLGEYAAVVLMCSLTTILFLGG 273
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1M_PODAN (NADH-ubiquinone oxidoreductase chain 1 OS=Podospora anserina GN=ND1 PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 7.767e-12 Identity = 31/73 (42.47%), Postives = 50/73 (68.49%), Query Frame = 2 Query: 419 WNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 637 WN++ FI+F I S+AE R PFDL EAE ELV+G+ TE++ + F F++A Y ++++ + ++L+LGG Sbjct: 181 WNIFPLLPVFIIFFIGSVAETNRAPFDLAEAESELVSGFMTEHAAVVFVFFFLAEYGSIVLMCILTSILFLGG 253
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NUOH_RALEJ (NADH-quinone oxidoreductase subunit H OS=Ralstonia eutropha (strain JMP134) GN=nuoH PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.014e-11 Identity = 31/64 (48.44%), Postives = 45/64 (70.31%), Query Frame = 2 Query: 446 FIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 637 F V+ IS +AE R PFD+ E E E+VAG+ EYSG+ F LF++A Y+N+++ S +L+LGG Sbjct: 215 FGVYFISGVAETNRHPFDVVEGESEIVAGHMIEYSGMAFALFFLAEYINMIIISTITALLFLGG 278 The following BLAST results are available for this feature:
BLAST of CX291464 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX291464 ID=CX291464; Name=CX291464; organism=Citrus clementina; type=EST; length=707bpback to top |