CX291464
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_SACHY (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Saccharum hybrid GN=ndhA PE=2 SV=2) HSP 1 Score: 187.963 bits (476), Expect = 4.359e-47 Identity = 93/109 (85.32%), Postives = 99/109 (90.83%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLGWLK 682 LSNSLSTVDIV AQSKYGF+GWNLWRQPIGF+VFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIK+GLFY+ SYLNLLVSSLFVTVLYLGG N SI F G+ + Sbjct: 184 LSNSLSTVDIVEAQSKYGFFGWNLWRQPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLLVSSLFVTVLYLGGWNFSIPYISFFGFFQ 292
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_MAIZE (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Zea mays GN=ndhA PE=2 SV=3) HSP 1 Score: 187.963 bits (476), Expect = 4.359e-47 Identity = 93/109 (85.32%), Postives = 99/109 (90.83%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLGWLK 682 LSNSLSTVDIV AQSKYGF+GWNLWRQPIGF+VFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIK+GLFY+ SYLNLLVSSLFVTVLYLGG N SI F G+ + Sbjct: 184 LSNSLSTVDIVEAQSKYGFFGWNLWRQPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLLVSSLFVTVLYLGGWNFSIPYISFFGFFQ 292
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_ARATH (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Arabidopsis thaliana GN=ndhA PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 4.359e-47 Identity = 91/98 (92.86%), Postives = 95/98 (96.94%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLS 649 LSNSLSTVDIV AQSKYGFWGWNLWRQPIGFI+FLISSLAE ERLPFDLPEAEEEL+AGYQTEYSGIKFGLFYVASYLNLL+SSLFVTVLYLGG N+S Sbjct: 185 LSNSLSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAESERLPFDLPEAEEELIAGYQTEYSGIKFGLFYVASYLNLLISSLFVTVLYLGGWNIS 282
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_ANTFO (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Anthoceros formosae GN=ndhA PE=2 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 4.359e-47 Identity = 92/99 (92.93%), Postives = 95/99 (95.96%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LSNSLSTVDIV QSK+GFWGWN+WRQPIGFI FLI+SLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG NLSI Sbjct: 186 LSNSLSTVDIVEIQSKFGFWGWNVWRQPIGFIAFLIASLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNLSI 284
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_AMBTC (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Amborella trichopoda GN=ndhA PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 7.436e-47 Identity = 92/99 (92.93%), Postives = 94/99 (94.95%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LSNS STVDIV AQ KYGFWGWNLWRQPIGF+ FLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFY+ASYLNLLVSSLFVTVLYLGG NLSI Sbjct: 185 LSNSSSTVDIVEAQYKYGFWGWNLWRQPIGFLAFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYLASYLNLLVSSLFVTVLYLGGWNLSI 283
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_LIRTU (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Liriodendron tulipifera GN=ndhA PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.268e-46 Identity = 96/105 (91.43%), Postives = 98/105 (93.33%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFL 670 LSNS STVDIV AQSKYGF GWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIK GLFYVASYLNLLVSSLFVTVLYLGG NLSI Y+F+ Sbjct: 185 LSNSSSTVDIVEAQSKYGFGGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKSGLFYVASYLNLLVSSLFVTVLYLGGWNLSI-PYIFI 288
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_WHEAT (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Triticum aestivum GN=ndhA PE=2 SV=2) HSP 1 Score: 186.037 bits (471), Expect = 1.657e-46 Identity = 91/99 (91.92%), Postives = 96/99 (96.97%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LSNSLSTVDIV AQSKYGF+GWN+WRQPIGF+VFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIK+GLFY+ SYLNLLVSSLFVTVLYLGG NLSI Sbjct: 184 LSNSLSTVDIVEAQSKYGFFGWNIWRQPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLLVSSLFVTVLYLGGWNLSI 282
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_CYCTA (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cycas taitungensis GN=ndhA PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.657e-46 Identity = 90/99 (90.91%), Postives = 92/99 (92.93%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LSNSL TVDIV AQS+YGFWGWNLWRQPIGFI F ISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLL SSLFVT+LYLGG N SI Sbjct: 187 LSNSLGTVDIVEAQSRYGFWGWNLWRQPIGFIAFFISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLASSLFVTILYLGGWNFSI 285
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_SORBI (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Sorghum bicolor GN=ndhA PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.164e-46 Identity = 92/109 (84.40%), Postives = 98/109 (89.91%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLGWLK 682 LSNS STVDIV AQSKYGF+GWNLWRQPIGF+VFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIK+GLFY+ SYLNLLVSSLFVTVLYLGG N SI F G+ + Sbjct: 184 LSNSSSTVDIVEAQSKYGFFGWNLWRQPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLLVSSLFVTVLYLGGWNFSIPYISFFGFFQ 292
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_ILLOL (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Illicium oligandrum GN=ndhA PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.690e-46 Identity = 94/99 (94.95%), Postives = 94/99 (94.95%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LSNS STVDIV AQSKYGF GWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIK GLFYVASYLNLLVSSLFVTVLYLGG NLSI Sbjct: 186 LSNSSSTVDIVEAQSKYGFCGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKSGLFYVASYLNLLVSSLFVTVLYLGGWNLSI 284 The following BLAST results are available for this feature:
BLAST of CX291464 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291464 ID=CX291464; Name=CX291464; organism=Citrus clementina; type=EST; length=707bpback to top |