CX291464
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_MARPO (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Marchantia polymorpha GN=ndhA PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.924e-43 Identity = 86/99 (86.87%), Postives = 91/99 (91.92%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LSNSLSTVDIV AQSKYGF WNLWRQPIGFIVF I+SLAECERLPFDLPEAEEELVAGYQTEYSG+KF FY+ASYLNLLVSSLFVT+LYLGG + SI Sbjct: 186 LSNSLSTVDIVEAQSKYGFLSWNLWRQPIGFIVFFIASLAECERLPFDLPEAEEELVAGYQTEYSGMKFAFFYLASYLNLLVSSLFVTILYLGGWHFSI 284
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_CHAGL (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Chaetosphaeridium globosum GN=ndhA PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.475e-42 Identity = 84/99 (84.85%), Postives = 90/99 (90.91%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LS+SLSTVDIV QSKYG GWN+WRQPIGFI FLI+SLAECERLPFDLPEAEEELVAGYQTEY GIKFGLFYV SYLNLLVS+LFV+VLYLGG N S+ Sbjct: 182 LSHSLSTVDIVEEQSKYGILGWNIWRQPIGFIAFLIASLAECERLPFDLPEAEEELVAGYQTEYCGIKFGLFYVGSYLNLLVSALFVSVLYLGGWNFSL 280
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_STAPU (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Staurastrum punctulatum GN=ndhA PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.096e-41 Identity = 81/99 (81.82%), Postives = 91/99 (91.92%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 +S+SLST++IV Q+KYG GWN+WRQPIGF VFLISSLAECERLPFDLPEAEEELVAGYQTEY GIKFGLFYVASY+NLLVS+LFV+VLYLGG + SI Sbjct: 186 MSHSLSTIEIVEQQAKYGILGWNIWRQPIGFFVFLISSLAECERLPFDLPEAEEELVAGYQTEYCGIKFGLFYVASYINLLVSALFVSVLYLGGWDFSI 284
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_ZYGCR (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Zygnema circumcarinatum GN=ndhA PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 6.097e-41 Identity = 79/107 (73.83%), Postives = 91/107 (85.05%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLGW 676 +SNSLST++IV QS++G GWN+WRQP+GFI F+IS+LAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNL SSLFVT+LYLGG + +I W Sbjct: 185 MSNSLSTIEIVEQQSRFGILGWNIWRQPVGFIAFVISALAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLFASSLFVTILYLGGWSPNISFEQVFNW 291
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_CHAVU (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Chara vulgaris GN=ndhA PE=3 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 7.963e-41 Identity = 82/103 (79.61%), Postives = 87/103 (84.47%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYL 664 LSN+LST DIV Q KYG WN+WRQP+GFI F I+SLAECERLPFDLPEAEEELVAGYQTEYSGIKFG+FYVASYLNLLVSSLF VLYLGG N I T L Sbjct: 186 LSNTLSTSDIVEQQCKYGILSWNIWRQPVGFITFFIASLAECERLPFDLPEAEEELVAGYQTEYSGIKFGIFYVASYLNLLVSSLFAVVLYLGGWNFPIPTTL 288
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_NOSP7 (NAD(P)H-quinone oxidoreductase subunit 1 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ndhA PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.026e-40 Identity = 77/108 (71.30%), Postives = 91/108 (84.26%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLGWL 679 +SNSLSTVDIV QS YG GWN+WRQPIGF++F I++LAECERLPFDLPEAEEE+VAGYQTEYSG+KFGLFY+ SY+NL++SSL V +LYLGG + I L GWL Sbjct: 186 MSNSLSTVDIVNQQSGYGILGWNIWRQPIGFLIFWIAALAECERLPFDLPEAEEEIVAGYQTEYSGMKFGLFYLGSYVNLILSSLLVAILYLGGWDFPIPLNLIAGWL 293
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_CHLAT (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Chlorokybus atmophyticus GN=ndhA PE=3 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 1.150e-39 Identity = 77/94 (81.91%), Postives = 86/94 (91.49%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 637 LSNSLSTV+IV QS YG GWN+WRQPIGF+ FLI++LAECERLPFDLPEAEEELVAGYQTEYSG+KFGLFYV SY+NLL+SSLF T+LYLGG Sbjct: 186 LSNSLSTVEIVEQQSAYGILGWNVWRQPIGFVSFLIAALAECERLPFDLPEAEEELVAGYQTEYSGMKFGLFYVGSYVNLLLSSLFATILYLGG 279
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_MESVI (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Mesostigma viride GN=ndhA PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.961e-39 Identity = 76/99 (76.77%), Postives = 89/99 (89.90%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LS+SLST+DIV QS YG GWN+WRQPIGFI F+I++LAECERLPFDLPEAEEELVAGYQTEY+G+KFGLFY+ SY+NLLVS+LF +VLYLGG +L I Sbjct: 186 LSDSLSTIDIVQKQSTYGILGWNIWRQPIGFIAFIIAALAECERLPFDLPEAEEELVAGYQTEYTGMKFGLFYIGSYVNLLVSALFASVLYLGGWSLPI 284
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_SYNP2 (NAD(P)H-quinone oxidoreductase subunit 1 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ndhA PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.370e-39 Identity = 74/108 (68.52%), Postives = 90/108 (83.33%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLGWL 679 +SNSLST+DIV QS YG GWN+WRQP+GF++F I++LAECERLPFDLPEAEEELVAGYQTEY+G+KFGLFYV SY+NL++S+L V++LYLGG I GWL Sbjct: 186 MSNSLSTIDIVEQQSGYGILGWNIWRQPVGFLIFWIAALAECERLPFDLPEAEEELVAGYQTEYAGMKFGLFYVGSYVNLVLSALIVSILYLGGWEFPIPLDKLAGWL 293
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_MICAN (NAD(P)H-quinone oxidoreductase subunit 1 OS=Microcystis aeruginosa (strain NIES-843) GN=ndhA PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.169e-38 Identity = 76/117 (64.96%), Postives = 91/117 (77.78%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLGWLK*ISGWNLW 706 +SNSLST+DIV QS YG GWN+WRQP+GF++F I++LAECERLPFDLPEAEEELVAGYQTEY+G+KF LFYV SY+NL++S+L VLYLGG I GWL +S N W Sbjct: 186 MSNSLSTIDIVEQQSGYGILGWNIWRQPVGFLIFWIAALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYVGSYVNLVLSALVFAVLYLGGWEFPIPVNALAGWLG-VSETNPW 301 The following BLAST results are available for this feature:
BLAST of CX291464 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291464 ID=CX291464; Name=CX291464; organism=Citrus clementina; type=EST; length=707bpback to top |