CX291464
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_NEPOL (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Nephroselmis olivacea GN=ndhA PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.310e-38 Identity = 74/94 (78.72%), Postives = 85/94 (90.43%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 637 L++SLSTVDIV +QS +G WN+WRQPIGF+ FLI++LAECERLPFDLPEAEEELVAGYQTEY+G+KFGLFYV SY+NLLVS FVTVLYLGG Sbjct: 188 LADSLSTVDIVESQSSWGILTWNIWRQPIGFVAFLIAALAECERLPFDLPEAEEELVAGYQTEYTGMKFGLFYVGSYVNLLVSGCFVTVLYLGG 281
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_CYAP7 (NAD(P)H-quinone oxidoreductase subunit 1 OS=Cyanothece sp. (strain PCC 7424) GN=ndhA PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.310e-38 Identity = 72/108 (66.67%), Postives = 88/108 (81.48%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLGWL 679 +SNSLST+DIV QS YG GWN+WRQP+GF++F I++LAECERLPFDLPEAEEE+VAGYQTEY+G+KFGLFYV SY+NL++S+L VLYLGG + GWL Sbjct: 186 MSNSLSTIDIVDQQSGYGILGWNIWRQPVGFLIFWIAALAECERLPFDLPEAEEEIVAGYQTEYAGMKFGLFYVGSYVNLVLSALVFAVLYLGGWEFPVPLDSLAGWL 293
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_TRIEI (NAD(P)H-quinone oxidoreductase subunit 1 OS=Trichodesmium erythraeum (strain IMS101) GN=ndhA PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.076e-37 Identity = 73/107 (68.22%), Postives = 87/107 (81.31%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLGW 676 +SNSLST+DIV QS YG GWN+WRQP+GFI+F I+ LAECERLPFDLPEAEEELVAGYQTEY+G+KF L+Y+ASY+NL++SSL V VLYLGG + L W Sbjct: 186 MSNSLSTIDIVEQQSSYGILGWNIWRQPLGFIIFWIAVLAECERLPFDLPEAEEELVAGYQTEYTGMKFALYYLASYVNLVLSSLLVAVLYLGGWESPLPVELISNW 292
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_CYAP8 (NAD(P)H-quinone oxidoreductase subunit 1 OS=Cyanothece sp. (strain PCC 8801) GN=ndhA PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.076e-37 Identity = 72/108 (66.67%), Postives = 87/108 (80.56%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLGWL 679 +SNSLST+DIV QS YG GWN+WRQP+G I+F I++LAECERLPFDLPEAEEE+VAGYQTEYSG+KFGLFYV SY+NL++S+L +LYLGG + GWL Sbjct: 186 MSNSLSTIDIVQQQSGYGILGWNVWRQPVGLIIFWIAALAECERLPFDLPEAEEEIVAGYQTEYSGMKFGLFYVGSYVNLVLSALVFAILYLGGWEFPVPLDKLAGWL 293
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_SYNP6 (NAD(P)H-quinone oxidoreductase subunit 1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ndhA PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.836e-37 Identity = 72/108 (66.67%), Postives = 88/108 (81.48%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLGWL 679 +SNSLST+DIV QS YG GWN+WRQP+GFI+F I++LAECERLPFDLPEAEEELVAGYQTEY+G+KF LFYV SY+NL++S+L V++LYLGG I W+ Sbjct: 186 MSNSLSTIDIVDQQSGYGILGWNIWRQPVGFIIFWIAALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYVGSYVNLILSALLVSILYLGGWEFPIPLDRVADWI 293
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_SYNE7 (NAD(P)H-quinone oxidoreductase subunit 1 OS=Synechococcus elongatus (strain PCC 7942) GN=ndhA PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.836e-37 Identity = 72/108 (66.67%), Postives = 88/108 (81.48%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLGWL 679 +SNSLST+DIV QS YG GWN+WRQP+GFI+F I++LAECERLPFDLPEAEEELVAGYQTEY+G+KF LFYV SY+NL++S+L V++LYLGG I W+ Sbjct: 186 MSNSLSTIDIVDQQSGYGILGWNIWRQPVGFIIFWIAALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYVGSYVNLILSALLVSILYLGGWEFPIPLDRVADWI 293
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_ANASP (NAD(P)H-quinone oxidoreductase subunit 1 OS=Anabaena sp. (strain PCC 7120) GN=ndhA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.131e-37 Identity = 72/99 (72.73%), Postives = 87/99 (87.88%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 +SNSLSTVDIV QS YG GWN+WRQP+GF++F I++LAECERLPFDLPEAEEELVAGYQTEYSG+KF LFY++SY+NL++S+L V VLYLGG + I Sbjct: 186 MSNSLSTVDIVNQQSDYGILGWNIWRQPLGFMIFWIAALAECERLPFDLPEAEEELVAGYQTEYSGMKFALFYLSSYVNLILSALLVAVLYLGGWDFPI 284
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_ANAVT (NAD(P)H-quinone oxidoreductase subunit 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ndhA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.090e-37 Identity = 72/99 (72.73%), Postives = 87/99 (87.88%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 +SNSLSTVDIV QS YG GWN+WRQP+GF++F I++LAECERLPFDLPEAEEELVAGYQTEYSG+KF LFY++SY+NL++S+L V VLYLGG + I Sbjct: 186 MSNSLSTVDIVNQQSGYGILGWNIWRQPLGFLIFWIAALAECERLPFDLPEAEEELVAGYQTEYSGMKFALFYLSSYVNLVLSALLVAVLYLGGWDFPI 284
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_SYNY3 (NAD(P)H-quinone oxidoreductase subunit 1 OS=Synechocystis sp. (strain PCC 6803) GN=ndhA PE=3 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 1.190e-36 Identity = 71/108 (65.74%), Postives = 88/108 (81.48%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLGWL 679 +SNSLST+DIV QS YG GWN+WRQP+GF++F I++LAECERLPFDLPEAEEELVAGYQTEY+G+KF LFY+ SY+NL++S+L +VLYLGG + I WL Sbjct: 186 MSNSLSTIDIVDQQSGYGILGWNIWRQPVGFLIFWIAALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGSYVNLVLSALVFSVLYLGGWDFPIPLENVANWL 293
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_PROMM (NAD(P)H-quinone oxidoreductase subunit 1 OS=Prochlorococcus marinus (strain MIT 9313) GN=ndhA PE=3 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 1.190e-36 Identity = 72/108 (66.67%), Postives = 85/108 (78.70%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLGWL 679 +SNSLSTVDIV Q+ G WN+WRQP+GF++F I +LAECERLPFDLPEAEEELVAGYQTEY+G+KF LFY+ SY+NL++SSL V VLYLGG I GWL Sbjct: 186 MSNSLSTVDIVAQQNGAGLLSWNVWRQPVGFLIFWICALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGSYINLVLSSLLVAVLYLGGWGFPIPVEWLAGWL 293 The following BLAST results are available for this feature:
BLAST of CX291464 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291464 ID=CX291464; Name=CX291464; organism=Citrus clementina; type=EST; length=707bpback to top |