CX291464
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_PROM3 (NAD(P)H-quinone oxidoreductase subunit 1 OS=Prochlorococcus marinus (strain MIT 9303) GN=ndhA PE=3 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 1.190e-36 Identity = 72/108 (66.67%), Postives = 85/108 (78.70%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLGWL 679 +SNSLSTVDIV Q+ G WN+WRQP+GF++F I +LAECERLPFDLPEAEEELVAGYQTEY+G+KF LFY+ SY+NL++SSL V VLYLGG I GWL Sbjct: 186 MSNSLSTVDIVAQQNGAGLLSWNVWRQPVGFLIFWICALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGSYINLVLSSLLVAVLYLGGWGFPIPVEWLAGWL 293
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_SYNPW (NAD(P)H-quinone oxidoreductase subunit 1 OS=Synechococcus sp. (strain WH7803) GN=ndhA PE=3 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 3.462e-36 Identity = 70/108 (64.81%), Postives = 86/108 (79.63%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLGWL 679 +SNSLSTVDIV Q+ G WN+WRQP+GF++F I +LAECERLPFDLPEAEEELVAGYQTEY+G+KF LFY+ SY+NL++S+L V+VLYLGG + GWL Sbjct: 186 MSNSLSTVDIVSQQTGAGILSWNIWRQPVGFLIFWICALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGSYINLVLSALLVSVLYLGGWGFPVPVEWLAGWL 293
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_PROMT (NAD(P)H-quinone oxidoreductase subunit 1 OS=Prochlorococcus marinus (strain NATL2A) GN=ndhA PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.522e-36 Identity = 70/94 (74.47%), Postives = 83/94 (88.30%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 637 +SNSLSTVDIV Q+ GF WN+WRQP+GFI+F I +LAECERLPFDLPEAEEELVAGYQTEYSG+KF LFY+A Y+NL++S+L V+VLYLGG Sbjct: 186 MSNSLSTVDIVEQQNTAGFLSWNIWRQPVGFIIFWICALAECERLPFDLPEAEEELVAGYQTEYSGMKFALFYLAGYINLVLSALLVSVLYLGG 279
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_PLEBO (NAD(P)H-quinone oxidoreductase subunit 1 OS=Plectonema boryanum GN=ndhA PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.906e-36 Identity = 71/106 (66.98%), Postives = 85/106 (80.19%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLG 673 +SNSLSTVDIV Q+ YG GWN+WRQP+GFI+F I++LAECER+PFDLPEAEEELVAGYQTEYSG+KF LFY+ SY+NL +S+L VLYLGG I + G Sbjct: 186 MSNSLSTVDIVNQQAGYGILGWNIWRQPVGFIIFWIAALAECERIPFDLPEAEEELVAGYQTEYSGMKFALFYLGSYVNLTLSALLFAVLYLGGWEFPISLSVISG 291
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_CYAP4 (NAD(P)H-quinone oxidoreductase subunit 1 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=ndhA PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.906e-36 Identity = 71/108 (65.74%), Postives = 87/108 (80.56%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLGWL 679 +SNSLSTVDIV QS G GWN+WRQP+G I+F I++LAECERLPFDLPEAEEELVAGYQTEY+G+KF LFY+ SY+NL++S+L V +LYLGG + I L W+ Sbjct: 186 MSNSLSTVDIVNQQSGLGILGWNVWRQPVGLILFWIAALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGSYVNLVLSALMVAILYLGGWDFPIPLNLVASWV 293
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_SYNPX (NAD(P)H-quinone oxidoreductase subunit 1 OS=Synechococcus sp. (strain WH8102) GN=ndhA PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.713e-36 Identity = 70/108 (64.81%), Postives = 86/108 (79.63%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLGWL 679 +SNSLSTVDIV Q+ G WN+WRQP+GF++F I +LAECERLPFDLPEAEEELVAGYQTEY+G+KF LFY+A Y+NL++S++ V+VLYLGG I GWL Sbjct: 187 MSNSLSTVDIVGQQTGAGILSWNIWRQPVGFLIFWICALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLAGYINLVLSAVLVSVLYLGGWGFPIPVEWLAGWL 294
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_PROMA (NAD(P)H-quinone oxidoreductase subunit 1 OS=Prochlorococcus marinus GN=ndhA PE=3 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 7.713e-36 Identity = 71/108 (65.74%), Postives = 86/108 (79.63%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLGWL 679 +SNSLST+DIV Q+ GF WN+WRQP+GF++F I +LAECERLPFDLPEAEEELVAGYQTEY+G+KF LFY+ SY+NL++SSL V+VLYLGG I L L Sbjct: 186 MSNSLSTIDIVNQQNTLGFLSWNIWRQPVGFLIFWICALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGSYINLVLSSLLVSVLYLGGWGFPIPVELIANTL 293
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_ACAM1 (NAD(P)H-quinone oxidoreductase subunit 1 OS=Acaryochloris marina (strain MBIC 11017) GN=ndhA PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.713e-36 Identity = 71/108 (65.74%), Postives = 88/108 (81.48%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLGWL 679 +SNSLST+DIV QS YG GWN+ RQPIGF++F I++LAECERLPFDLPEAEEELVAGYQTEY+G+KF LFY+ SY+NL++SS+ V VLY GG +L I + W+ Sbjct: 186 MSNSLSTIDIVNQQSGYGILGWNVIRQPIGFMLFWIAALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGSYVNLVLSSILVAVLYFGGWDLPIPATMIADWI 293
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_CYAA5 (NAD(P)H-quinone oxidoreductase subunit 1 OS=Cyanothece sp. (strain ATCC 51142) GN=ndhA PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.007e-35 Identity = 68/108 (62.96%), Postives = 85/108 (78.70%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLGWL 679 +SNSLST+DIV QS YG GWN+WRQP+GF +F I++LAECERLPFDLPEAEEE+VAGYQTEY+G+KF LFY+ SY+NL++S+L +LYLGG + WL Sbjct: 186 MSNSLSTIDIVEQQSGYGILGWNIWRQPVGFFIFWIAALAECERLPFDLPEAEEEIVAGYQTEYAGMKFALFYLGSYVNLVLSALVFAILYLGGWEFPVPLDKLAEWL 293
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_SYNS3 (NAD(P)H-quinone oxidoreductase subunit 1 OS=Synechococcus sp. (strain CC9311) GN=ndhA PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.316e-35 Identity = 70/108 (64.81%), Postives = 85/108 (78.70%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLGWL 679 +SNSLSTVDIV Q+ G WN+WRQP+GF++F I +LAECERLPFDLPEAEEELVAGYQTEYSG+KF LFY+ SY+NL++S+L V++LYLGG I WL Sbjct: 186 MSNSLSTVDIVNQQTGAGVLSWNIWRQPVGFLIFWICALAECERLPFDLPEAEEELVAGYQTEYSGMKFALFYLGSYINLVLSALLVSILYLGGWGFPIPVEWLASWL 293 The following BLAST results are available for this feature:
BLAST of CX291464 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291464 ID=CX291464; Name=CX291464; organism=Citrus clementina; type=EST; length=707bpback to top |