CX291474

Overview
NameCX291474
Unique NameCX291474
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length745
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX291474 vs. ExPASy Swiss-Prot
Match: HETE1_PODAN (Vegetative incompatibility protein HET-E-1 OS=Podospora anserina GN=HET-E1 PE=4 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.322e-11
Identity = 35/95 (36.84%), Postives = 51/95 (53.68%), Query Frame = 3 
Query:  432 SKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHP 716
            S V    FS+DG+ +AS   DK + +W+  +     T + H   +  V F P+  ++A+ S DKT++IWDAA    C QT  GH   V S+ F P
Sbjct:  842 SSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRERVASGSDDKTIKIWDAAS-GTCTQTLEGHGGRVQSVAFSP 935
The following BLAST results are available for this feature:
BLAST of CX291474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
HETE1_PODAN9.322e-1136.84Vegetative incompatibility protein HET-E-1 OS=Podo... [more]

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Properties
Property NameValue
Genbank descriptionC03009B02SK OF2 Citrus clementina cDNA clone C03009B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291474 ID=CX291474; Name=CX291474; organism=Citrus clementina; type=EST; length=745bp
GAGGCCGCACCCCAACAGAATACAGAAAAAGGAAAGGGCCCTCTTCTTCT
GGAGCTGCTAATAGTGGTTGCACTGGAAACACCGTTGGCCCTTCTCCAAA
TTCCCAACCATCTACCCCATCAACTCATACACCTGGTGATGCCGTAGCCA
TGTCAGGCAGTATGCAGCATGTTAGTAACGTGCCTAAAGGTTTGATGATG
TATGGTTCTGATGGAACAGGTGGTCATGCATCATCGACAAACCAGCTGGA
TGACATGGAACATTTTGGAGATATTGGCTCCTTAGATGATAATGTGGAAT
CTTTTCTCTCTCAAGATGATGGAGATGGAAGGGATCTGTTTGGCTCATTG
AAACGGAACCCTTCCGAACAAGCTACTGAAACTTCCAAAGCTTTCTCATT
CAACGAAGTTAGTTCAATACGTAAAAGTAGTAGCAAAGTTACCTGTTGTC
ATTTCTCTTCAGATGGAAAGTTATTGGCCAGTGCTGGGCATGACAAGAAG
GTTGTTGTTTGGAACATGGAAAATTTTCAAACTGAATGCACTCCAGATGA
TCACAATCATATAATTACTGATGTTCGCTTCAGACCAAATTCAACTCAGC
TAGCAACATCTTCATTTGATAAGACAGTGCGAATTTGGGATGCTGCTAAA
CCAAACTTTTGCTTGCAGACTTATACAGGGCATAACAATCACGTGATGTC
CCTTGACTTCCACCCTAAGAAAGATGACCTTTTCTGCTCATGTGA
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