CX291499
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291499 vs. ExPASy Swiss-Prot
Match: IF6_METTH (Translation initiation factor 6 OS=Methanobacterium thermoautotrophicum GN=eif6 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.931e-21 Identity = 65/184 (35.33%), Postives = 98/184 (53.26%), Query Frame = 2 Query: 53 FEAELADV--IPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIE 598 FE L + + V+K SI G+ + G L GN NG ++ + D+E+ L + + V RI ER +A+GN + ND+ A+ L + ++I DVL V+V T+AG +VGS + +NRG L++P S E++ + L V GTVN G +I A N G +TT EL+ IE Sbjct: 34 FEGVLREALEVEVLKVSISGSSLNGALAVGNSNGFVVSNQAMDREIDALAAAGVEAV---RIPERFTAVGNLVLANDNGAVASPLLSDDALQVIGDVLEVDVKVSTLAGLNIVGSMGAATNRGALLNPQASSEEIGIIEDTLGVEADVGTVNHGVTLIGACSVANSNGVLVGEETTGPELARIE 214
BLAST of CX291499 vs. ExPASy Swiss-Prot
Match: IF6_METMJ (Translation initiation factor 6 OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=eif6 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.182e-20 Identity = 68/198 (34.34%), Postives = 98/198 (49.49%), Query Frame = 2 Query: 14 LVAIGGSESFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVF 607 +V G F + EL + +V T I G+ IIG L +GN GL++ TD+EL L + V ++ ++A GN I ND VA H ++ + E I L V V R T+ G VG +N+G LVHP + ++ L ++ +P+ G+VN GS ++ GL N GS TT EL IE VF Sbjct: 25 IVYPGAPAEFTAALARELD--VEIVSTFIQGSSIIGSLVSGNSQGLVVSGLATDEELA----VLSEYRDVFLLKGPMNAAGNIILANDCVAAVHPEMQIDVAEEIGSFLEVPVVRLTLGGIKTVGMAGFATNKGILVHPRANDTEIANLERIVDLPIGLGSVNMGSGLVGTGLLANSKGYVAGSVTTGFELGRIEEVF 216
BLAST of CX291499 vs. ExPASy Swiss-Prot
Match: IF6_PYRAE (Translation initiation factor 6 OS=Pyrobaculum aerophilum GN=eif6 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.017e-20 Identity = 62/174 (35.63%), Postives = 96/174 (55.17%), Query Frame = 2 Query: 83 VVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESV 604 V + ++ + ++G N NG+LLP ++E++ L +L V + I + +A+ N I + VAL L+ +++ADVLGVEV TIAGN LVG+ ++RG LV P + +DL +LS +V + GTVNRG + G+ VND A G +T EL ++ V Sbjct: 48 VARFTVARSPLLGIFTVVNDNGVLLPPLVLEEEVR-LFKALGLNVDI--INTKYTAISNLILAGNKVALVSPLLEPSARKVVADVLGVEVIVDTIAGNPLVGALAVLNSRGLLVAPEATDDDLKKLSEYFKVRVDVGTVNRGKSFLRGGIVVNDNGALVGDETAGPELMRMQQV 218
BLAST of CX291499 vs. ExPASy Swiss-Prot
Match: IF6_SULAC (Translation initiation factor 6 OS=Sulfolobus acidocaldarius GN=eif6 PE=3 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 3.440e-20 Identity = 62/176 (35.23%), Postives = 95/176 (53.98%), Query Frame = 2 Query: 83 VVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEV-FRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVF 607 +++T+I + ++G L GN + +LLP T E++ ++ D V V+ ++ R +ALGN I N H AL + DL + L ++ + TIA I VGS +++ GLVH + E+L +LS L +V L +GTVN GS I +GL N GS TT E+ I+ F Sbjct: 47 IIQTTISKSVLVGILVTGNNDVILLPRTALADEIKVIKEQAKD-VRVEVVDIRPTALGNIILSNTHGALIYQDLSEAEINKVKKALQIDTAIKGTIANIITVGSVAVITDKAGLVHIDATEEELKKLSELFKVKLDSGTVNFGSVFIRSGLVANRNGVLVGSSTTGAEILRIQRAF 221
BLAST of CX291499 vs. ExPASy Swiss-Prot
Match: IF6_PYRAR (Translation initiation factor 6 OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=eif6 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.440e-20 Identity = 61/174 (35.06%), Postives = 93/174 (53.45%), Query Frame = 2 Query: 83 VVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESV 604 V + ++ + ++G N NG+LLP ++E++ L +L V V + + +A+ N I + VAL L+ +++ADVLGVEV TIAGN LVGS ++RG LV P + EDL +L+ + GTVN+G + G+ VND A G +T E I+ V Sbjct: 48 VARLTVAKSPLLGIFTVVNDNGVLLPPMVLEEEIR-LFKALGLNVEV--LNTKYTAISNLILAGNKVALVSPLLEPSVRKVVADVLGVEVIVDTIAGNPLVGSLAVLNSRGVLVAPEATDEDLKKLAEYFKAKTDLGTVNKGKSFLRGGIVVNDHGALVGDETAGPEFMRIQQV 218
BLAST of CX291499 vs. ExPASy Swiss-Prot
Match: IF6_THEVO (Translation initiation factor 6 OS=Thermoplasma volcanium GN=eif6 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.493e-20 Identity = 56/176 (31.82%), Postives = 93/176 (52.84%), Query Frame = 2 Query: 77 IPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESV 604 + + + SI G+ +IG + A N NG++LP+ + L + D V ++++++A+GN I NDH A+ H + + I D LGVE R +I + VGS +++G LV+P T ++L+ L +V + +GT N GS + A + N G DTT E+ I+ V Sbjct: 46 VDIKRISIDGSTLIGTMIAVNSNGIVLPYGSNIDGLDGI-----DGRNVLYLKDKINAVGNDIIANDHGAIIHKAFSNKARKEIEDTLGVETIRTSIGNILTVGSASVLTSKGMLVNPETDDDELEFLKDFFKVSVKSGTANFGSIYVGASIVANSKGILVGRDTTPIEIDRIDDV 216
BLAST of CX291499 vs. ExPASy Swiss-Prot
Match: IF6_SULTO (Translation initiation factor 6 OS=Sulfolobus tokodaii GN=eif6 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.493e-20 Identity = 66/192 (34.38%), Postives = 106/192 (55.21%), Query Frame = 2 Query: 35 ESFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVE-VFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVF 607 + TF+ E +++T+I + +IG AGN N +LLP D+E++ +++ D V V+ ++ R +ALGN I N + AL + +L + I + L ++ + + +IA I VGS +++ GLVH T+ E+LD+LS L +V + GTVN GS I +GL N GS TT E+ I+ F Sbjct: 37 QKIQETFKTE------IIQTTIAKSFLIGIFVAGNNNVILLPRNVDDEEVKKIKDIARD-VRVEILDIRPTALGNIILTNSYGALIYPELSSIEFKKIKESLQIDNIEKGSIANIITVGSVGVITDKAGLVHIDTTEEELDKLSKLFRVKIDTGTVNFGSAFIHSGLIANRNGVLVGSATTGPEILRIQRAF 221
BLAST of CX291499 vs. ExPASy Swiss-Prot
Match: IF6_THEAC (Translation initiation factor 6 OS=Thermoplasma acidophilum GN=eif6 PE=3 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 5.868e-20 Identity = 57/176 (32.39%), Postives = 93/176 (52.84%), Query Frame = 2 Query: 77 IPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESV 604 + V + SI + +IG + N NGL++P+ + L L D V +++++++A+GN I NDH A+ H + + + I D LGVE R TI + VGS +++G LV+P T ++L+ L +V + +GT N GS + A + N G DTT E+ I+ V Sbjct: 44 VDVRRISIDNSSLIGTMMVMNSNGLIVPYGSEITGLGDL-----DGRNVLQLKDKINAIGNDIIANDHGAIIHKNFSNRSRKEIEDTLGVETIRTTIGNILTVGSAGILTSKGMLVNPETDDDELEFLRDFFKVSVKSGTANFGSIYVGASIVANSKGVLVGKDTTPIEMDRIDDV 214
BLAST of CX291499 vs. ExPASy Swiss-Prot
Match: IF6_STAMF (Translation initiation factor 6 OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=eif6 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.001e-19 Identity = 60/179 (33.52%), Postives = 93/179 (51.96%), Query Frame = 2 Query: 59 AELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQ---VVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATEL 586 AE DV +V+T I T + G L GN NG++LP D+EL L N+L + V R + +ALGN + CN+ + ++L+R+ I++ LGVE + I + GS +++GG++HP S ++ EL + +V TVN G I +GL N+ G TT E+ Sbjct: 40 AETLDV-ELVETKIANTILNGVLVVGNDNGIILPRIILDEELDILNNNLKKHDLNIYVSRSKN--TALGNILLCNNKACIAGSELERQELNKISEALGVEALYKDIMNLTIPGSLAVVTDKGGVIHPDISDDENRELKEIFKVAFERATVNSGIPFIKSGLIANNKGIIVGEYTTGPEI 215
BLAST of CX291499 vs. ExPASy Swiss-Prot
Match: IF6_METHJ (Translation initiation factor 6 OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=eif6 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.307e-19 Identity = 58/185 (31.35%), Postives = 94/185 (50.81%), Query Frame = 2 Query: 50 TFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESV 604 T E A + +V+T+I + IIG L GN NGL++ T++E+ +L + + +EE ++A GN I NDH A H ++D E + ++D L V V T+ VG +N G +V P T+ ++ L + +P+ GTV G+ ++ GL N + G T+ EL IE + Sbjct: 35 TTRYEEALKVEIVRTTIQRSPIIGSLLVGNNNGLVITGMATEEEIA----TLSEYRDLMLLEEGMNAAGNIILANDHFAAVHPEMDEEFMDALSDFLKVPVIPLTLGDVKTVGMAAVATNSGVVVSPRTTPGEIQRLEQVCSLPVGKGTVTMGNAMVGTGLVANRYGYLAGVGTSGYELGRIEDI 215 The following BLAST results are available for this feature:
BLAST of CX291499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291499 ID=CX291499; Name=CX291499; organism=Citrus clementina; type=EST; length=613bpback to top |