CX291610
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291610 vs. ExPASy Swiss-Prot
Match: ABCB3_DICDI (ABC transporter B family member 3 OS=Dictyostelium discoideum GN=abcB3 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.210e-37 Identity = 74/110 (67.27%), Postives = 94/110 (85.45%), Query Frame = 2 Query: 41 SNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALM 370 +NAH+FIS LP GY T VGE+GVQ+SGGQ+QRIAIARAV+KNP ILLLDE+TSALDAES ++VQ+AL+ +M RTT+V+AH L+TI+NAD+I +K GV E+G+HD LM Sbjct: 629 ANAHSFISQLPQGYNTLVGEKGVQMSGGQRQRIAIARAVIKNPNILLLDESTSALDAESTKLVQEALDVLMKGRTTIVIAHNLSTIRNADVIIYIKKGVAVERGTHDELM 738 HSP 2 Score: 148.673 bits (374), Expect = 2.859e-35 Identity = 74/117 (63.25%), Postives = 96/117 (82.05%), Query Frame = 2 Query: 41 SNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 391 SN+H+FI LP+GY T +GE+ QLSGGQKQRIAIARA+++NPKILLLDE+TSALDA+S ++VQ+ALE VM RTT+V+AH L TI+NAD IA V+ G I E+G+HD L++ +G Y Sbjct: 1307 SNSHSFIIDLPNGYNTELGEKYTQLSGGQKQRIAIARAIIRNPKILLLDESTSALDADSTKLVQEALENVMKGRTTIVIAHNLLTIQNADCIAYVRAGQIIERGTHDELLE-AEGPY 1422
BLAST of CX291610 vs. ExPASy Swiss-Prot
Match: AB13B_ARATH (ABC transporter B family member 13 OS=Arabidopsis thaliana GN=ABCB13 PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 6.804e-37 Identity = 77/110 (70.00%), Postives = 92/110 (83.64%), Query Frame = 2 Query: 41 SNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALM 370 +NA +FI +LP+GY T VGE G QLSGGQKQRIAIARAVL+NPKILLLDEATSALDAESE++VQ AL+ VM RTT+VVAHRL+TI+N D I V+++G + E GSH LM Sbjct: 486 ANADSFIKSLPNGYNTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESEKIVQQALDNVMEKRTTIVVAHRLSTIRNVDKIVVLRDGQVRETGSHSELM 595 HSP 2 Score: 148.288 bits (373), Expect = 3.734e-35 Identity = 71/117 (60.68%), Postives = 95/117 (81.20%), Query Frame = 2 Query: 41 SNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 391 +NAH FI + GY+T+ G++GVQLSGGQKQR+AIARAVLK+P +LLLDEATSALD SE++VQ+AL+++M RTTV+VAHRL+TI+ AD +AV+ G + E+GSH L+ I +G Y Sbjct: 1119 ANAHEFIIKMEEGYKTHAGDKGVQLSGGQKQRVAIARAVLKDPSVLLLDEATSALDTSSEKLVQEALDKLMKGRTTVLVAHRLSTIRKADTVAVLHKGRVVEKGSHRELVSIPNGFY 1235
BLAST of CX291610 vs. ExPASy Swiss-Prot
Match: ABCB4_DICDI (ABC transporter B family member 4 OS=Dictyostelium discoideum GN=abcB4 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.161e-36 Identity = 75/110 (68.18%), Postives = 95/110 (86.36%), Query Frame = 2 Query: 41 SNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALM 370 +NAH FIS P GYET VGERGVQLSGGQKQRIAIARA+LKNP+I++LDEATSALD++SE +VQ AL+ +M RTT+V+AHRL+T++NAD+I V+ +G IAE G+H+ LM Sbjct: 639 ANAHQFISNFPKGYETIVGERGVQLSGGQKQRIAIARAILKNPQIIILDEATSALDSQSELLVQTALDNLMKGRTTLVIAHRLSTVQNADLIGVLSHGKIAEFGNHNELM 748
BLAST of CX291610 vs. ExPASy Swiss-Prot
Match: MDR3_MOUSE (Multidrug resistance protein 3 OS=Mus musculus GN=Abcb1a PE=1 SV=3) HSP 1 Score: 152.91 bits (385), Expect = 1.516e-36 Identity = 75/111 (67.57%), Postives = 93/111 (83.78%), Query Frame = 2 Query: 41 SNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMK 373 +NA++FI LPH ++T VGERG QLSGGQKQRIAIARA+++NPKILLLDEATSALD ESE VVQ AL++ RTT+V+AHRL+T++NAD+IA GVI EQG+HD LM+ Sbjct: 503 ANAYDFIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTVRNADVIAGFDGGVIVEQGNHDELMR 613 HSP 2 Score: 142.124 bits (357), Expect = 2.676e-33 Identity = 67/110 (60.91%), Postives = 88/110 (80.00%), Query Frame = 2 Query: 41 SNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALM 370 +N H FI +LP Y T VG++G QLSGGQKQRIAIARA+++ P ILLLDEATSALD ESE+VVQ+AL++ RT +V+AHRL+TI+NAD+I V++NG + E G+H L+ Sbjct: 1148 ANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLL 1257
BLAST of CX291610 vs. ExPASy Swiss-Prot
Match: MDR1_MOUSE (Multidrug resistance protein 1 OS=Mus musculus GN=Abcb1 PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.516e-36 Identity = 75/111 (67.57%), Postives = 93/111 (83.78%), Query Frame = 2 Query: 41 SNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMK 373 +NA++FI LPH ++T VGERG QLSGGQKQRIAIARA+++NPKILLLDEATSALD ESE VVQ AL++ RTT+V+AHRL+T++NAD+IA GVI EQG+HD LM+ Sbjct: 506 ANAYDFIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTVRNADVIAGFDGGVIVEQGNHDELMR 616 HSP 2 Score: 142.124 bits (357), Expect = 2.676e-33 Identity = 67/110 (60.91%), Postives = 88/110 (80.00%), Query Frame = 2 Query: 41 SNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALM 370 +N H FI +LP Y T VG++G QLSGGQKQRIAIARA+++ P ILLLDEATSALD ESE+VVQ+AL++ RT +V+AHRL+TI+NAD+I V++NG + E G+H L+ Sbjct: 1150 ANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIENGKVKEHGTHQQLL 1259
BLAST of CX291610 vs. ExPASy Swiss-Prot
Match: MDR2_CRIGR (Multidrug resistance protein 2 OS=Cricetulus griseus GN=PGY2 PE=2 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 1.980e-36 Identity = 75/111 (67.57%), Postives = 93/111 (83.78%), Query Frame = 2 Query: 41 SNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMK 373 +NA++FI LPH ++T VGERG QLSGGQKQRIAIARA+++NPKILLLDEATSALD ESE VVQ AL++ RTT+V+AHRL+T++NAD+IA GVI EQG+H+ LMK Sbjct: 506 ANAYDFIMKLPHKFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTVRNADVIAGFDGGVIVEQGNHEELMK 616 HSP 2 Score: 142.124 bits (357), Expect = 2.676e-33 Identity = 67/110 (60.91%), Postives = 88/110 (80.00%), Query Frame = 2 Query: 41 SNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALM 370 +N H FI +LP Y T VG++G QLSGGQKQRIAIARA+++ P ILLLDEATSALD ESE+VVQ+AL++ RT +V+AHRL+TI+NAD+I V++NG + E G+H L+ Sbjct: 1150 ANIHQFIESLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLL 1259
BLAST of CX291610 vs. ExPASy Swiss-Prot
Match: MDR1_RAT (Multidrug resistance protein 1 OS=Rattus norvegicus GN=Abcb1 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.980e-36 Identity = 75/111 (67.57%), Postives = 93/111 (83.78%), Query Frame = 2 Query: 41 SNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMK 373 +NA++FI LPH ++T VGERG QLSGGQKQRIAIARA+++NPKILLLDEATSALD ESE VVQ AL++ RTT+V+AHRL+T++NAD+IA GVI EQG+H+ LMK Sbjct: 506 ANAYDFIMKLPHKFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTVRNADVIAGFDGGVIVEQGNHEELMK 616 HSP 2 Score: 142.895 bits (359), Expect = 1.569e-33 Identity = 68/110 (61.82%), Postives = 88/110 (80.00%), Query Frame = 2 Query: 41 SNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALM 370 +N H FI +LP Y T VG++G QLSGGQKQRIAIARA+++ P ILLLDEATSALD ESE+VVQ+AL++ RT VV+AHRL+TI+NAD+I V++NG + E G+H L+ Sbjct: 1151 ANIHQFIDSLPEKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCVVIAHRLSTIQNADLIVVIQNGQVKEHGTHQQLL 1260
BLAST of CX291610 vs. ExPASy Swiss-Prot
Match: MDR1_HUMAN (Multidrug resistance protein 1 OS=Homo sapiens GN=ABCB1 PE=1 SV=3) HSP 1 Score: 152.525 bits (384), Expect = 1.980e-36 Identity = 75/111 (67.57%), Postives = 94/111 (84.68%), Query Frame = 2 Query: 41 SNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMK 373 +NA++FI LPH ++T VGERG QLSGGQKQRIAIARA+++NPKILLLDEATSALD ESE VVQ AL++ RTT+V+AHRL+T++NAD+IA +GVI E+G+HD LMK Sbjct: 507 ANAYDFIMKLPHKFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQVALDKARKGRTTIVIAHRLSTVRNADVIAGFDDGVIVEKGNHDELMK 617 HSP 2 Score: 140.198 bits (352), Expect = 1.017e-32 Identity = 67/110 (60.91%), Postives = 88/110 (80.00%), Query Frame = 2 Query: 41 SNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALM 370 +N H FI +LP+ Y T VG++G QLSGGQKQRIAIARA+++ P ILLLDEATSALD ESE+VVQ+AL++ RT +V+AHRL+TI+NAD+I V +NG + E G+H L+ Sbjct: 1152 ANIHAFIESLPNKYSTKVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVFQNGRVKEHGTHQQLL 1261
BLAST of CX291610 vs. ExPASy Swiss-Prot
Match: AB14B_ARATH (ABC transporter B family member 14 OS=Arabidopsis thaliana GN=ABCB14 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.586e-36 Identity = 75/110 (68.18%), Postives = 92/110 (83.64%), Query Frame = 2 Query: 41 SNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALM 370 +NA +FI +LP+GY T VGE G QLSGGQKQRIAIARAVL+NPKILLLDEATSALDAESE++VQ AL+ VM RTT+V+AHRL+TI+N D I V+++G + E GSH L+ Sbjct: 487 ANADSFIKSLPNGYNTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESEKIVQQALDNVMEKRTTIVIAHRLSTIRNVDKIVVLRDGQVRETGSHSELI 596 HSP 2 Score: 147.517 bits (371), Expect = 6.369e-35 Identity = 71/117 (60.68%), Postives = 94/117 (80.34%), Query Frame = 2 Query: 41 SNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 391 +NAH FIS + GY T+VG++GVQLSGGQKQR+AIARAVLK+P +LLLDEATSALD +E+ VQ+AL+++M RTT++VAHRL+TI+ AD I V+ G + E+GSH L+ +DG Y Sbjct: 1121 ANAHEFISRMEEGYMTHVGDKGVQLSGGQKQRVAIARAVLKDPSVLLLDEATSALDTSAEKQVQEALDKLMKGRTTILVAHRLSTIRKADTIVVLHKGKVVEKGSHRELVSKSDGFY 1237
BLAST of CX291610 vs. ExPASy Swiss-Prot
Match: MDR1_CRIGR (Multidrug resistance protein 1 OS=Cricetulus griseus GN=ABCB1 PE=1 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 3.377e-36 Identity = 75/111 (67.57%), Postives = 93/111 (83.78%), Query Frame = 2 Query: 41 SNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMK 373 +NA++FI LPH ++T VGERG QLSGGQKQRIAIARA+++NPKILLLDEATSALD ESE VVQ AL++ RTT+V+AHRL+T++NADIIA GVI EQG+H+ LM+ Sbjct: 504 ANAYDFIMKLPHKFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTVRNADIIAGFDGGVIVEQGNHEELMR 614 HSP 2 Score: 142.124 bits (357), Expect = 2.676e-33 Identity = 67/110 (60.91%), Postives = 88/110 (80.00%), Query Frame = 2 Query: 41 SNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALM 370 +N H FI +LP Y T VG++G QLSGGQKQRIAIARA+++ P ILLLDEATSALD ESE+VVQ+AL++ RT +V+AHRL+TI+NAD+I V++NG + E G+H L+ Sbjct: 1149 ANIHQFIESLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLL 1258 The following BLAST results are available for this feature:
BLAST of CX291610 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX291610 ID=CX291610; Name=CX291610; organism=Citrus clementina; type=EST; length=697bpback to top |