CX291610

Overview
NameCX291610
Unique NameCX291610
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291610 vs. ExPASy Swiss-Prot
Match: YOR1_YEAST (Oligomycin resistance ATP-dependent permease YOR1 OS=Saccharomyces cerevisiae GN=YOR1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12
Identity = 37/104 (35.58%), Postives = 61/104 (58.65%), Query Frame = 2
Query:   59 ISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAE-SERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDAL 367
            +  LP G  T +GERG+ LSGGQK RI +AR+V K   I L D+  SA+D+   + ++ + L  ++ N+T ++  H+L+ I+ A  + V+      + G+ D L
Sbjct:  692 LDILPAGDMTEIGERGITLSGGQKARINLARSVYKKKDIYLFDDVLSAVDSRVGKHIMDECLTGMLANKTRILATHQLSLIERASRVIVLGTDGQVDIGTVDEL 795          
BLAST of CX291610 vs. ExPASy Swiss-Prot
Match: PSTB_THEMA (Phosphate import ATP-binding protein pstB OS=Thermotoga maritima GN=pstB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12
Identity = 39/98 (39.80%), Postives = 61/98 (62.24%), Query Frame = 2
Query:   62 SALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRL-TTIKNADIIAVVKNGVIAEQG 352
            +AL    ++ + + G +LSGGQ+QR+ IARA+   P+++LLDE TSALD  + + ++  LE +  N T V+V H +   I+ AD IA +  G + E G
Sbjct:  131 AALWDEVKSELNKSGTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYG 228          
BLAST of CX291610 vs. ExPASy Swiss-Prot
Match: METN_SYNWW (Methionine import ATP-binding protein metN OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=metN PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12
Identity = 39/84 (46.43%), Postives = 56/84 (66.67%), Query Frame = 2
Query:  110 QLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERV--MVNRTTVVVAHRLTTIKNA-DIIAVVKNGVIAEQG 352
            QLSGGQKQR+ IARA+  +PK+LL DEATSALD ++ R +   L+ +   +  T V++ H +  IK+A D +AV+ +  I E G
Sbjct:  140 QLSGGQKQRVGIARALANDPKVLLSDEATSALDPQTTRSILGLLKDINRKLGLTIVLITHDMNVIKDACDRVAVIDDSTIVEVG 223          
BLAST of CX291610 vs. ExPASy Swiss-Prot
Match: METN_STAS1 (Methionine import ATP-binding protein metN OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=metN PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12
Identity = 37/84 (44.05%), Postives = 55/84 (65.48%), Query Frame = 2
Query:  110 QLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNR--TTVVVAHRLTTIKN-ADIIAVVKNGVIAEQG 352
            +LSGGQKQR+ IARA+   P +LL DEATSALD ++   + + L ++   R  T V++ H +  I+   D +AV++NG + EQG
Sbjct:  140 ELSGGQKQRVGIARALANEPSVLLCDEATSALDPQTTDEILELLLKIKEERNLTIVIITHEMHVIRRICDEVAVMENGKVIEQG 223          
BLAST of CX291610 vs. ExPASy Swiss-Prot
Match: METN_CLOAB (Methionine import ATP-binding protein metN OS=Clostridium acetobutylicum GN=metN PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12
Identity = 40/88 (45.45%), Postives = 57/88 (64.77%), Query Frame = 2
Query:  113 LSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERV--MVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDAL 367
            LSGGQKQR+AIARA+  NPKILL DEATSALD  + + + + L  +   +  T V+V H++  +K   + +A++  GVI E G  + L
Sbjct:  137 LSGGQKQRVAIARALALNPKILLCDEATSALDPNTTKSILNLLRTINSKLGITIVIVTHQMEVVKGICERVALIDAGVIKETGDVENL 224          
BLAST of CX291610 vs. ExPASy Swiss-Prot
Match: METN4_OCEIH (Methionine import ATP-binding protein metN 4 OS=Oceanobacillus iheyensis GN=metN4 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12
Identity = 37/84 (44.05%), Postives = 57/84 (67.86%), Query Frame = 2
Query:  110 QLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERV--MVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQG 352
            +LSGGQKQR+AIARA+   P++LL DEATSALD ++   + D L R+   +  T +++ H +  I+   D +AV++NG + E+G
Sbjct:  140 ELSGGQKQRVAIARALSHEPEVLLSDEATSALDPDTTEAILDLLLRINKELGITILLITHEMNVIQRVCDRVAVMENGEVIEEG 223          
BLAST of CX291610 vs. ExPASy Swiss-Prot
Match: METN2_PSESM (Methionine import ATP-binding protein metN 2 OS=Pseudomonas syringae pv. tomato GN=metN2 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12
Identity = 41/84 (48.81%), Postives = 53/84 (63.10%), Query Frame = 2
Query:  110 QLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERV--MVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQG 352
            QLSGGQKQR+ IARA+   PKILL DEATSALD ++   V   L  +   +  T V++ H +  I+   D +AV+  GVI EQG
Sbjct:  141 QLSGGQKQRVGIARALATKPKILLCDEATSALDPQTTASVLQLLAEINRELKLTIVLITHEMDVIRRVCDQVAVMDAGVIVEQG 224          
BLAST of CX291610 vs. ExPASy Swiss-Prot
Match: METN2_PSEF5 (Methionine import ATP-binding protein metN 2 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=metN2 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12
Identity = 37/84 (44.05%), Postives = 58/84 (69.05%), Query Frame = 2
Query:  110 QLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERV--MVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQG 352
            QLSGGQKQR+ IARA++ +P+ILL DEATSALD E+ + +   L+ +   +  T +++ H +  I++  D + V+++G I EQG
Sbjct:  170 QLSGGQKQRVGIARALVHDPEILLCDEATSALDPETTQSILGLLKEINQRLGLTIILITHEMAVIRDICDRVVVLEHGRIVEQG 253          
BLAST of CX291610 vs. ExPASy Swiss-Prot
Match: METN2_LISMO (Methionine import ATP-binding protein metN 2 OS=Listeria monocytogenes GN=metN2 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12
Identity = 41/95 (43.16%), Postives = 58/95 (61.05%), Query Frame = 2
Query:   77 GYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERV--MVNRTTVVVAHRLTTI-KNADIIAVVKNGVIAEQG 352
            G E        +LSGGQKQR+ IARA+  NPK+LL DEATSALD ++   V + L  +   +N T +V+ H +  I K  + +AV++NG + E G
Sbjct:  129 GLEGKENAYPAELSGGQKQRVGIARALANNPKVLLCDEATSALDPQTTDEVLELLLDINKRLNLTIIVITHEMHVIRKICNRVAVMENGKVVELG 223          
BLAST of CX291610 vs. ExPASy Swiss-Prot
Match: METN1_PSEPF (Methionine import ATP-binding protein metN 1 OS=Pseudomonas fluorescens (strain Pf0-1) GN=metN1 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12
Identity = 41/85 (48.24%), Postives = 53/85 (62.35%), Query Frame = 2
Query:  110 QLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERV--MVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGS 355
            QLSGGQKQR+ IARA+   PKILL DEATSALD ++   V   L  +   +  T V++ H +  I+   D + V+  GVI EQGS
Sbjct:  141 QLSGGQKQRVGIARALATKPKILLCDEATSALDPQTTASVLQLLAEINRELKLTIVLITHEMDVIRRVCDQVGVMDAGVIVEQGS 225          
The following BLAST results are available for this feature:
BLAST of CX291610 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
YOR1_YEAST9.894e-1235.58Oligomycin resistance ATP-dependent permease YOR1 ... [more]
PSTB_THEMA9.894e-1239.80Phosphate import ATP-binding protein pstB OS=Therm... [more]
METN_SYNWW9.894e-1246.43Methionine import ATP-binding protein metN OS=Synt... [more]
METN_STAS19.894e-1244.05Methionine import ATP-binding protein metN OS=Stap... [more]
METN_CLOAB9.894e-1245.45Methionine import ATP-binding protein metN OS=Clos... [more]
METN4_OCEIH9.894e-1244.05Methionine import ATP-binding protein metN 4 OS=Oc... [more]
METN2_PSESM9.894e-1248.81Methionine import ATP-binding protein metN 2 OS=Ps... [more]
METN2_PSEF59.894e-1244.05Methionine import ATP-binding protein metN 2 OS=Ps... [more]
METN2_LISMO9.894e-1243.16Methionine import ATP-binding protein metN 2 OS=Li... [more]
METN1_PSEPF9.894e-1248.24Methionine import ATP-binding protein metN 1 OS=Ps... [more]

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Properties
Property NameValue
Genbank descriptionC03011C06SK OF2 Citrus clementina cDNA clone C03011C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291610 ID=CX291610; Name=CX291610; organism=Citrus clementina; type=EST; length=697bp
AGGAGCTACCGAAGAGGAGATCATTGCGGCTACAGAAGCATCAAATGCAC
ACAACTTCATAAGTGCATTGCCACATGGCTACGAGACCAATGTTGGGGAA
CGAGGAGTGCAGCTATCCGGTGGGCAGAAGCAGAGAATTGCCATAGCAAG
AGCTGTATTAAAGAACCCAAAAATTCTTTTGCTTGATGAGGCAACAAGTG
CACTGGATGCAGAATCAGAGCGTGTAGTACAAGATGCATTGGAGAGAGTG
ATGGTTAACAGGACAACTGTGGTTGTAGCTCACCGCCTTACCACTATAAA
AAATGCTGATATAATAGCTGTAGTGAAGAATGGTGTGATTGCAGAGCAGG
GAAGCCATGATGCACTGATGAAAATCACTGATGGGGCTTATGCTTCCTTG
GTAGCTCTCCATGTGAGCTCATCATAAGGAGAAGCAGAGTGCGTTACCAA
TAGTTGAACACATGACTTCATCTGTCCCGGGGCCATCACCGTGGAACTGA
AATTTTTGTCAGCAGCAGTTTATTTTTGCCACACCTATTTACCTAGCTTT
AAAAGTAGGAACTTACTTACACTTTACCAATTTCAAGAAGGGAATTTGAG
AACTTTGACATTGTATGAATTTCCATTAAAAATTTTGAGCAATTACACAT
GTAAGTAATCCTTCAGAATTTTTATTTGTTAGTTTTCCTTTCTTTGC
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