CX291672

Overview
NameCX291672
Unique NameCX291672
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length583
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291672 vs. ExPASy Swiss-Prot
Match: MARK3_MOUSE (MAP/microtubule affinity-regulating kinase 3 OS=Mus musculus GN=Mark3 PE=1 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 1.259e-37
Identity = 80/181 (44.20%), Postives = 111/181 (61.33%), Query Frame = 2
Query:   32 REIMNHRALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKKTIQRILSVHYSIPGYV 574
            RE+   + L HPNI++  EV  T   L ++MEYA+GGE+F+ + + GR  E EAR  F+Q++S V YCH  +I HRDLK EN LLD      +KI DFG+S    + S+  +  G+P Y APE+   K+YDG   DVWS GV LY ++ G+ PF    D +N K+  +R+L   Y IP Y+
Sbjct:  102 REVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADM--NIKIADFGFSNEFTVGSKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGKYRIPFYM 276          
BLAST of CX291672 vs. ExPASy Swiss-Prot
Match: CIPKA_ORYSJ (CBL-interacting protein kinase 10 OS=Oryza sativa subsp. japonica GN=CIPK10 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.259e-37
Identity = 81/172 (47.09%), Postives = 110/172 (63.95%), Query Frame = 2
Query:   20 EHVQREIMNHRALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKK 526
            + ++REI     ++HP I++  EV  T T++  ++EY  GGELF ++   GR  E+ AR +FQQLIS + +CHS  + HRDLK EN LLD ++   LKI DFG S  +    Q     +T GTPAY+APEV++RK YDG  ADVW+CGV LYV+L G  PF+D      +KK
Sbjct:   56 DQIRREISVMNLVRHPCIVQLYEVMATKTKIYFILEYVKGGELFNKV-RRGRLKEEVARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENR--NLKISDFGLSALAECKRQDGLLHTTCGTPAYVAPEVINRKGYDGAKADVWACGVILYVLLAGYLPFQDKNVINMYKK 224          
BLAST of CX291672 vs. ExPASy Swiss-Prot
Match: MARK3_RAT (MAP/microtubule affinity-regulating kinase 3 OS=Rattus norvegicus GN=Mark3 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.645e-37
Identity = 80/181 (44.20%), Postives = 111/181 (61.33%), Query Frame = 2
Query:   32 REIMNHRALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKKTIQRILSVHYSIPGYV 574
            RE+   + L HPNI++  EV  T   L ++MEYA+GGE+F+ + + GR  E EAR  F+Q++S V YCH  +I HRDLK EN LLD      +KI DFG+S    + S+  +  G+P Y APE+   K+YDG   DVWS GV LY ++ G+ PF    D +N K+  +R+L   Y IP Y+
Sbjct:  102 REVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADM--NIKITDFGFSNEFTVGSKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGKYRIPFYM 276          
BLAST of CX291672 vs. ExPASy Swiss-Prot
Match: MRKA_DICDI (Probable serine/threonine-protein kinase MARK-A OS=Dictyostelium discoideum GN=mrkA PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.806e-37
Identity = 81/183 (44.26%), Postives = 116/183 (63.39%), Query Frame = 2
Query:   26 VQREIMNHRALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKKTIQRILSVHYSIPGYV 574
            VQRE+   + L HPNIIR  EV  T   L ++MEYA  GE+ + + + G  +E +AR FF Q++S ++YCHS +  HRDLK EN LLD ++  ++KI DFG S      S  K+  G+P Y +PE++ RKEY+G   DVWS GV L+V++ G  PF    D  N+ +  Q+IL+ +Y+IP Y+
Sbjct:  154 VQREVRIMKLLHHPNIIRLYEVIETSRALYLIMEYAGEGEVMDFMIAHGVLTESQARTFFTQIVSAINYCHSKRAVHRDLKPENLLLDCNR--QIKIIDFGLSNVFTPGSYLKTFCGSPTYASPELILRKEYNGPSVDVWSMGVVLFVLVTGYLPF----DGDNYVELFQKILAGNYTIPSYL 330          
BLAST of CX291672 vs. ExPASy Swiss-Prot
Match: MARK4_MOUSE (MAP/microtubule affinity-regulating kinase 4 OS=Mus musculus GN=Mark4 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.806e-37
Identity = 80/181 (44.20%), Postives = 108/181 (59.67%), Query Frame = 2
Query:   32 REIMNHRALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKKTIQRILSVHYSIPGYV 574
            RE+   + L HPNI++  EV  T   L +VMEYA+ GE+F+ + S GR  E EAR  F+Q++S V YCH   I HRDLK EN LLD      +KI DFG+S    L S+  +  G+P Y APE+   K+YDG   D+WS GV LY ++ G+ PF    D  N K+  +R+L   Y +P Y+
Sbjct:  105 REVRIMKGLNHPNIVKLFEVIETEKTLYLVMEYASAGEVFDYLVSHGRMKEKEARAKFRQIVSAVHYCHQKNIVHRDLKAENLLLDAE--ANIKIADFGFSNEFTLGSKLDTFCGSPPYAAPELFQGKKYDGPEVDIWSLGVILYTLVSGSLPF----DGHNLKELRERVLRGKYRVPFYM 279          
BLAST of CX291672 vs. ExPASy Swiss-Prot
Match: MARK4_HUMAN (MAP/microtubule affinity-regulating kinase 4 OS=Homo sapiens GN=MARK4 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.806e-37
Identity = 80/181 (44.20%), Postives = 108/181 (59.67%), Query Frame = 2
Query:   32 REIMNHRALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKKTIQRILSVHYSIPGYV 574
            RE+   + L HPNI++  EV  T   L +VMEYA+ GE+F+ + S GR  E EAR  F+Q++S V YCH   I HRDLK EN LLD      +KI DFG+S    L S+  +  G+P Y APE+   K+YDG   D+WS GV LY ++ G+ PF    D  N K+  +R+L   Y +P Y+
Sbjct:  105 REVRIMKGLNHPNIVKLFEVIETEKTLYLVMEYASAGEVFDYLVSHGRMKEKEARAKFRQIVSAVHYCHQKNIVHRDLKAENLLLDAE--ANIKIADFGFSNEFTLGSKLDTFCGSPPYAAPELFQGKKYDGPEVDIWSLGVILYTLVSGSLPF----DGHNLKELRERVLRGKYRVPFYM 279          
BLAST of CX291672 vs. ExPASy Swiss-Prot
Match: CIPKM_ARATH (CBL-interacting serine/threonine-protein kinase 22 OS=Arabidopsis thaliana GN=CIPK22 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.806e-37
Identity = 86/190 (45.26%), Postives = 115/190 (60.53%), Query Frame = 2
Query:   23 HVQREIMNHRALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSKAPRLKICDFGYSK-------SSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKKTIQRILSVHYSIPGY 571
            HV+REI   R L+HP+I+   EV  T T++  VME A GGELF R+ S  RF+E  +R +F+QLIS V YCH+  + HRDLK EN LLD ++   LK+ DFG S          +LH+      GTPAY+APE+L +K YDG  AD+WSCGV L+++  G  PF DP    N     ++I    Y +P +
Sbjct:   72 HVKREISVMRRLRHPHIVLLSEVLATKTKIYFVMELAKGGELFSRVTS-NRFTESLSRKYFRQLISAVRYCHARGVFHRDLKPENLLLDENRD--LKVSDFGLSAMKEQIHPDGMLHT----LCGTPAYVAPELLLKKGYDGSKADIWSCGVVLFLLNAGYLPFRDP----NIMGLYRKIHKAQYKLPDW 250          
BLAST of CX291672 vs. ExPASy Swiss-Prot
Match: CIPKJ_ARATH (CBL-interacting serine/threonine-protein kinase 19 OS=Arabidopsis thaliana GN=CIPK19 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.806e-37
Identity = 83/171 (48.54%), Postives = 108/171 (63.16%), Query Frame = 2
Query:   23 HVQREIMNHRALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKK 526
            H++REI   R ++HPNI++  EV  T +++  VMEY  GGELF ++   GR  E+ AR +FQQLIS VS+CH   + HRDLK EN LLD +    LK+ DFG S  S    Q     +  GTPAY+APEVL+RK YDG   D+WSCGV L+V++ G  PF D      +KK
Sbjct:   72 HIKREISILRRVRHPNIVQLFEVMATKSKIYFVMEYVKGGELFNKVAK-GRLKEEMARKYFQQLISAVSFCHFRGVYHRDLKPENLLLDENG--NLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDIWSCGVILFVLMAGFLPFHDRNVMAMYKK 239          
BLAST of CX291672 vs. ExPASy Swiss-Prot
Match: CIPKI_ORYSJ (CBL-interacting protein kinase 18 OS=Oryza sativa subsp. japonica GN=CIPK18 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.806e-37
Identity = 81/187 (43.32%), Postives = 114/187 (60.96%), Query Frame = 2
Query:   20 EHVQREIMNHRALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKKTIQRILSVHYSIPGY 571
            + ++REI   + ++HPNI++  EV  T +++  V+EY  GGELF ++   GR  ED AR +FQQL+S V +CHS  + HRDLK EN L+D +    LKI DFG S  +    Q     +T GTPAY+APEV+SRK YDG   D WSCGV L+V++ G  PF+D     N  +  ++I    +  P +
Sbjct:   58 DQIKREISVMKLVRHPNIVQLYEVMATKSKIYFVLEYVKGGELFNKVAK-GRLKEDAARKYFQQLVSAVDFCHSRGVYHRDLKPENLLVDENG--NLKITDFGLSALAESRRQDGLLHTTCGTPAYVAPEVISRKGYDGVKVDTWSCGVILFVLMAGYLPFQD----SNLMEMYRKIGKAEFKCPAW 237          
BLAST of CX291672 vs. ExPASy Swiss-Prot
Match: CIPK2_ORYSJ (CBL-interacting protein kinase 2 OS=Oryza sativa subsp. japonica GN=CIPK2 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.806e-37
Identity = 81/187 (43.32%), Postives = 114/187 (60.96%), Query Frame = 2
Query:   20 EHVQREIMNHRALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKKTIQRILSVHYSIPGY 571
            + ++REI   + ++HPNI++  EV  T T++  V+E+  GGELF ++   GR  ED AR +FQQLI  V +CHS  + HRDLK EN LLD +    LK+ DFG S  +    Q     +T GTPAY+APEV++R+ YDG  AD+WSCGV L+V+L G  PF D    +N     ++I    +  P +
Sbjct:   56 DQIKREISVMKLVRHPNIVQLYEVMATKTKIYFVLEHVKGGELFNKV-QRGRLKEDAARKYFQQLICAVDFCHSRGVYHRDLKPENLLLDENS--NLKVSDFGLSALADCKRQDGLLHTTCGTPAYVAPEVINRRGYDGAKADIWSCGVILFVLLAGYLPFHD----KNLMDMYKKIGKAEFKCPSW 235          
The following BLAST results are available for this feature:
BLAST of CX291672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MARK3_MOUSE1.259e-3744.20MAP/microtubule affinity-regulating kinase 3 OS=Mu... [more]
CIPKA_ORYSJ1.259e-3747.09CBL-interacting protein kinase 10 OS=Oryza sativa ... [more]
MARK3_RAT1.645e-3744.20MAP/microtubule affinity-regulating kinase 3 OS=Ra... [more]
MRKA_DICDI2.806e-3744.26Probable serine/threonine-protein kinase MARK-A OS... [more]
MARK4_MOUSE2.806e-3744.20MAP/microtubule affinity-regulating kinase 4 OS=Mu... [more]
MARK4_HUMAN2.806e-3744.20MAP/microtubule affinity-regulating kinase 4 OS=Ho... [more]
CIPKM_ARATH2.806e-3745.26CBL-interacting serine/threonine-protein kinase 22... [more]
CIPKJ_ARATH2.806e-3748.54CBL-interacting serine/threonine-protein kinase 19... [more]
CIPKI_ORYSJ2.806e-3743.32CBL-interacting protein kinase 18 OS=Oryza sativa ... [more]
CIPK2_ORYSJ2.806e-3743.32CBL-interacting protein kinase 2 OS=Oryza sativa s... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC04002A03SK FlavFr1 Citrus clementina cDNA clone C04002A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291672 ID=CX291672; Name=CX291672; organism=Citrus clementina; type=EST; length=583bp
GCACGGGCAGAAGATTGATGAGCATGTTCAGAGGGAGATTATGAACCACA
GGGCCTTGAAGCATCCTAATATAATAAGATTTAAGGAAGTCTTTTTAACC
CCAACTGAACTAGCCATAGTCATGGAATACGCAGCTGGCGGCGAACTTTT
CGAGAGGATATGCAGTGCTGGCAGATTCAGCGAGGACGAGGCACGATACT
TCTTTCAACAGCTAATATCCGGAGTAAGCTACTGTCATTCAATGCAAATT
TGCCATAGAGATCTTAAGTTGGAAAACACACTCTTGGATGGTAGCAAGGC
ACCACGTCTCAAAATATGTGACTTCGGCTACTCCAAGTCCTCAGTGTTGC
ACTCGCAACCCAAATCCACCGTTGGAACCCCGGCCTACATCGCGCCTGAG
GTTTTGTCTAGAAAAGAGTACGACGGCAAGATTGCAGATGTTTGGTCTTG
TGGGGTGACGTTGTATGTGATGTTAGTCGGGGCTTATCCTTTTGAAGACC
CAGAGGATCCAAGAAACTTCAAAAAGACAATTCAGCGGATTCTGAGTGTC
CACTACTCAATACCAGGTTATGTCAGAGTTTCA
back to top