CX291726

Overview
NameCX291726
Unique NameCX291726
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length617
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291726 vs. ExPASy Swiss-Prot
Match: MAN3_ARATH (Mannan endo-1,4-beta-mannosidase 3 OS=Arabidopsis thaliana GN=MAN3 PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.262e-62
Identity = 105/203 (51.72%), Postives = 152/203 (74.88%), Query Frame = 2
Query:    2 VILSLVNNFKEYGGRPRYVEWARERGQSLKNEDDFYTNAVVKQYYKNHVKAVLTRINSITGVAYKDDPTIFAWELMNEARCPTDPSGTLLQEWIKEMAAHVKSIDNHHLLEVGLEGFYGESVPERQ-KYNPNNTPV-GTDFITNNQIPDVDFATIHIYPEQWLPPGNTSDEIQLAFVNRWIQAHIQDSDSILKKPILIGEFGK 604
            +I++ VNN+ ++GGR +YV+WA+  GQ++ ++DDFYTN +VKQYYKNHVK ++ R+N+ T V YKD+PTI  WELMNE +C  DPSG  L  W+ EMA +VKS+D+ HLL  GLEGFYG+S P+R+   NP    V GTDFI N+++  +DFA+IH YP+ W P  N  ++ +L  + +W++ H++D+ +ILKKP+++GEFGK
Sbjct:  126 MIITFVNNYSDFGGRKQYVDWAKNTGQNVSSDDDFYTNPLVKQYYKNHVKTMVNRVNTFTKVEYKDEPTIMGWELMNEPQCRADPSGKTLTAWMNEMALYVKSVDSKHLLSTGLEGFYGDSSPQRKTSLNPVAANVLGTDFIANHKLDAIDFASIHSYPDLWFP--NLDEKSRLNLLRKWLECHLEDAQNILKKPLILGEFGK 326          
BLAST of CX291726 vs. ExPASy Swiss-Prot
Match: MAN7_ORYSJ (Mannan endo-1,4-beta-mannosidase 7 OS=Oryza sativa subsp. japonica GN=MAN7 PE=2 SV=3)

HSP 1 Score: 237.269 bits (604), Expect = 4.796e-62
Identity = 110/206 (53.40%), Postives = 151/206 (73.30%), Query Frame = 2
Query:    2 VILSLVNNFKEYGGRPRYVEWARERGQSLKNEDDFYTNAVVKQYYKNHVKAVLTRINSITGVAYKDDPTIFAWELMNEARCPTDPSGTLLQEWIKEMAAHVKSIDNHHLLEVGLEGFYGESVPERQKYNPN--NTPVGTDFITNNQIPDVDFATIHIYPEQWLPPGNTSDEIQLAFVNRWIQAHIQDSDSILKKPILIGEFGKSYK 613
            +ILSL NN+++YGG+ +YV W +E G  L +EDDF+++  +K YYK  V+AV+TRIN++T   YKDDPTI AWEL+NE RCP+DPSG  LQ W++EMA++VKSID  HLLE+G+EGFYG S+PE    NP+  +   G DFI N+Q P +D A+IH+Y + WLP   +  E  L FV++W+Q HI D+ ++L  PI++GEFG S K
Sbjct:  103 LILSLCNNWEDYGGKAQYVRWGKEAGLDLTSEDDFFSDPTIKSYYKAFVEAVVTRINTVTNETYKDDPTILAWELINEPRCPSDPSGDTLQAWMEEMASYVKSIDPVHLLEIGIEGFYGPSIPELLPVNPDEYSGHAGIDFIRNHQAPGIDLASIHVYSDIWLP--QSIKENHLQFVDKWMQQHIDDAANLLGMPIVVGEFGVSVK 306          
BLAST of CX291726 vs. ExPASy Swiss-Prot
Match: MAN3_SOLLC (Mannan endo-1,4-beta-mannosidase 3 OS=Solanum lycopersicum GN=MAN3 PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 3.109e-61
Identity = 114/203 (56.16%), Postives = 155/203 (76.35%), Query Frame = 2
Query:    2 VILSLVNNFKEYGGRPRYVEWARERGQSLKNEDDFYTNAVVKQYYKNHVKAVLTRINSITGVAYKDDPTIFAWELMNEARCPTDPSG-TLLQEWIKEMAAHVKSIDNHHLLEVGLEGFYGESVPERQKYNPNNTPVGTDFITNNQIPDVDFATIHIYPEQWLPPGNTSDEIQLAFVNRWIQAHIQDSDSILKKPILIGEFGKS 607
            +ILS VN + ++GG+  YV WAR  G  + N+D+FYT+ ++K+Y KNH++ V+TR+NSIT VAYKDD TI AWELMNE R   D SG T+   W++EMA+ VKS+DN HLLEVG+EGFYG+S+PER+  NP    VGTDFI+N+ I ++DFATIH Y +QWL     SDE QLA++ +WI++H +D+ +ILKKP+++ EFGKS
Sbjct:  123 LILSFVNQWNDFGGKAEYVWWARNAGVQISNDDEFYTHPILKKYLKNHIE-VVTRLNSITKVAYKDDATIMAWELMNEPRDQADYSGKTVNVGWVQEMASFVKSLDNKHLLEVGMEGFYGDSIPERKLVNP-GYQVGTDFISNHLINEIDFATIHAYTDQWL--SGQSDEAQLAWMEKWIRSHWEDARNILKKPLVLAEFGKS 321          
BLAST of CX291726 vs. ExPASy Swiss-Prot
Match: MAN3_ORYSJ (Mannan endo-1,4-beta-mannosidase 3 OS=Oryza sativa subsp. japonica GN=MAN3 PE=2 SV=2)

HSP 1 Score: 233.417 bits (594), Expect = 6.926e-61
Identity = 107/202 (52.97%), Postives = 149/202 (73.76%), Query Frame = 2
Query:    2 VILSLVNNFKEYGGRPRYVEWARERGQSLKNEDDFYTNAVVKQYYKNHVKAVLTRINSITGVAYKDDPTIFAWELMNEARCPTDPSGTLLQEWIKEMAAHVKSID-NHHLLEVGLEGFYGESVPERQKYNPNNTPVGTDFITNNQIPDVDFATIHIYPEQWLPPGNTSDEIQLAFVNRWIQAHIQDSDSILKKPILIGEFGK 604
            ++L L NNF ++GG+ +YV WA + G +L   DDF+T++VVK YYKNHVKAVLTR+N++TGVAYKDDPTIFAWELMNE RC  DP+G ++Q W++EMA +VK +D   HL+  GLEGFYG+   E ++ NP     GT+++  ++   VDFATIH+YP+ WL  G+T+DE Q AF   W ++H+ D+ + L KP+L+ E+GK
Sbjct:  125 LLLCLTNNFDDFGGKRQYVRWAADAGHNLTAGDDFFTSSVVKSYYKNHVKAVLTRVNTVTGVAYKDDPTIFAWELMNEPRCDADPTGGMVQAWVEEMAPYVKRVDGGRHLVTAGLEGFYGDGEHESKELNPWGIYYGTNYVATHRAAGVDFATIHLYPDVWL-WGSTADE-QAAFFRNWTRSHVHDTAAFLGKPLLVTEYGK 324          
BLAST of CX291726 vs. ExPASy Swiss-Prot
Match: MAN4_ORYSJ (Mannan endo-1,4-beta-mannosidase 4 OS=Oryza sativa subsp. japonica GN=MAN4 PE=2 SV=2)

HSP 1 Score: 226.483 bits (576), Expect = 8.466e-59
Identity = 102/201 (50.75%), Postives = 145/201 (72.14%), Query Frame = 2
Query:    2 VILSLVNNFKEYGGRPRYVEWARERGQSLKNEDDFYTNAVVKQYYKNHVKAVLTRINSITGVAYKDDPTIFAWELMNEARCPTDPSGTLLQEWIKEMAAHVKSIDNHHLLEVGLEGFYGESVPERQKYNPNNTPVGTDFITNNQIPDVDFATIHIYPEQWLPPGNTSDEIQLAFVNRWIQAHIQDSDSILKKPILIGEFGK 604
            ++L L NNF  +GG+ +YV WA + G +L ++DDF+T+ +VK Y+KNHVK VLTR+N++TGVAYKDDPTIFAWELMNE RC  DP+G ++Q W++EMA +VKS+D  HL+  GLEGFYG    E ++ NP     GT+++  ++   VDFATIH+YP+ WL  G+++DE Q  F   W ++HI  + + L  P+L+ E+GK
Sbjct:  119 LLLCLTNNFDNFGGKRQYVRWAGDAGHNLTSDDDFFTSTIVKSYFKNHVKTVLTRVNTLTGVAYKDDPTIFAWELMNEPRCYADPTGAMVQAWVEEMAPYVKSVDGRHLVTPGLEGFYGAGEHESKELNPWGIYYGTNYVATHRTAAVDFATIHLYPDVWL-WGSSADE-QATFFRNWTRSHIDATAAYLGMPLLVTEYGK 317          
BLAST of CX291726 vs. ExPASy Swiss-Prot
Match: MAN4_ARATH (Putative mannan endo-1,4-beta-mannosidase 4 OS=Arabidopsis thaliana GN=MAN4 PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 7.167e-58
Identity = 103/202 (50.99%), Postives = 141/202 (69.80%), Query Frame = 2
Query:    2 VILSLVNNFKEYGGRPRYVEWARERGQSLKNEDDFYTNAVVKQYYKNHVKAVLTRINSITGVAYKDDPTIFAWELMNEARCPTDPSGTLLQEWIKEMAAHVKSIDNHHLLEVGLEGFYGESVPERQ-KYNP-NNTPVGTDFITNNQIPDVDFATIHIYPEQWLPPGNTSDEIQLAFVNRWIQAHIQDSDSILKKPILIGEFG 601
            +I+ LVNN+ +YGG+ +YV+WAR +G+ + + DDFY N V+K +YKNHVK VL R+N+ T VAYKD+P I AW+LMNE RC  D SG  L +WI EMA  VKS+D +HLL  G EGFYG+S PER+   NP +   VG DFI N+ I  +DFA++H   + W          +LAF+ RW++ HI+D+ +ILKKP+++ EFG
Sbjct:  125 LIILLVNNWDDYGGKKQYVDWARSKGEVVSSNDDFYRNPVIKDFYKNHVKTVLNRVNTFTKVAYKDEPAIMAWQLMNEPRCGVDKSGKTLMDWINEMAPFVKSVDPNHLLSTGHEGFYGDSSPERKNSLNPVSANTVGADFIANHNIDAIDFASMHCGSDLWFQ--RLDQNSRLAFIKRWLEGHIEDAQNILKKPVILAEFG 324          
BLAST of CX291726 vs. ExPASy Swiss-Prot
Match: MAN2_ARATH (Mannan endo-1,4-beta-mannosidase 2 OS=Arabidopsis thaliana GN=MAN2 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 2.306e-56
Identity = 102/205 (49.76%), Postives = 146/205 (71.22%), Query Frame = 2
Query:    2 VILSLVNNFKEYGGRPRYVEWARERGQSLKNEDD-FYTNAVVKQYYKNHVKAVLTRINSITGVAYKDDPTIFAWELMNEARCPTDPSGTLLQEWIKEMAAHVKSIDNHHLLEVGLEGFYGESVPERQKYNPNN--TPVGTDFITNNQIPDVDFATIHIYPEQWLPPGNTSDEIQLAFVNRWIQAHIQDSDSILKKPILIGEFGKS 607
            ++LSLVNN + YGG+ +YV WA + G  L + +D F+ +  +++Y+KN++  +LTR NS+TG+ Y++DPTIFAWEL+NE RC +D SG  LQ+WI EM A +KSIDN HLL VGLEGFYG S P++   NP    + +G+DF+ N+  P++DFA++HIYP+ W    +   E +L FV +W+ +HI+D D  LKKP+L  EFG S
Sbjct:  137 LLLSLVNNLQAYGGKTQYVNWAWQEGVGLSSSNDSFFFDPSIRRYFKNYLTVLLTRKNSLTGIEYRNDPTIFAWELINEPRCMSDVSGDTLQDWINEMTAFIKSIDNKHLLTVGLEGFYGPSSPKKLTVNPERWASELGSDFVRNSDSPNIDFASVHIYPDHWF--HDQGFEEKLKFVVKWMLSHIEDGDKELKKPVLFTEFGLS 339          
BLAST of CX291726 vs. ExPASy Swiss-Prot
Match: MANP_ARATH (Putative mannan endo-1,4-beta-mannosidase P OS=Arabidopsis thaliana GN=MANP PE=5 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 5.136e-56
Identity = 100/202 (49.50%), Postives = 139/202 (68.81%), Query Frame = 2
Query:    2 VILSLVNNFKEYGGRPRYVEWARERGQSLKNEDDFYTNAVVKQYYKNHVKAVLTRINSITGVAYKDDPTIFAWELMNEARCPTDPSGTLLQEWIKEMAAHVKSIDNHHLLEVGLEGFYGESVPERQ-KYNP-NNTPVGTDFITNNQIPDVDFATIHIYPEQWLPPGNTSDEIQLAFVNRWIQAHIQDSDSILKKPILIGEFG 601
            +I+ LVNN+ +YGG+ +YV+WAR +G+ + + DDFY N V+K++YKNHVK +L R+N+ T VAYKD+P   AW+LMNE RC  D SG  L  WI EMA  VKS+D +HLL  G EGFYG+S PER+   NP +   VG DFI N+ I  +DFA++H   + W          +LAF+ RW++ HI+D+ + LKKP+++ EFG
Sbjct:  109 LIIPLVNNWDDYGGKKQYVDWARSKGEMVSSNDDFYRNPVIKEFYKNHVKTMLNRVNTFTKVAYKDEPASMAWQLMNEPRCGVDRSGKTLMAWINEMALFVKSVDPNHLLSTGHEGFYGDSSPERKNSLNPVSANTVGADFIANHNIDAIDFASMHCGSDLWFQ--RLDQNSRLAFIKRWLEGHIEDAQNNLKKPVILAEFG 308          
BLAST of CX291726 vs. ExPASy Swiss-Prot
Match: MAN5_ORYSJ (Putative mannan endo-1,4-beta-mannosidase 5 OS=Oryza sativa subsp. japonica GN=MAN5 PE=2 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 8.761e-56
Identity = 107/206 (51.94%), Postives = 140/206 (67.96%), Query Frame = 2
Query:    2 VILSLVNNFKEYGGRPRYVEWARERGQSLKNEDDFYTNAVVKQYYKNHVKAVLTRINSITGVAYKDDPTIFAWELMNEARCPTDPSGTLLQEWIKEMAAHVKSIDNHHLLEVGLEGFYG-ESVPERQKYNPNN--TPVGTDFITNNQIPDVDFATIHIYPEQWLPPGNTSDEIQLAFVNRWIQAHIQDSDSIL-KKPILIGEFGKS 607
            +IL L+NN+ +YGG+ +YV WA+         D F+++  V+ Y+K+HV AVLTR+N+ TGVAY+DDPTI AWELMNE RC +DP+G  LQ WI EMA HVKS+D  HLL VG EGFYG  S P R + NPN      G DF+ N+++  VDFA++H+YP+ WLP G T  E QL F   W++AHI D++  L   P+L  EFG S
Sbjct:  173 LILPLINNWDDYGGKAQYVRWAQAAAAGA-GADAFFSDETVRGYFKSHVTAVLTRVNAYTGVAYRDDPTIMAWELMNEPRCASDPTGDTLQAWIAEMAFHVKSVDPAHLLGVGAEGFYGPSSPPARLRVNPNADVALAGADFVRNHRVLGVDFASVHVYPDTWLPAGATK-EAQLRFATSWVEAHIADAEGALGGMPVLFAEFGVS 376          
BLAST of CX291726 vs. ExPASy Swiss-Prot
Match: MAN5_ARATH (Mannan endo-1,4-beta-mannosidase 5 OS=Arabidopsis thaliana GN=MAN5 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.144e-55
Identity = 102/205 (49.76%), Postives = 145/205 (70.73%), Query Frame = 2
Query:    2 VILSLVNNFKEYGGRPRYVEWARERGQSLKNEDD-FYTNAVVKQYYKNHVKAVLTRINSITGVAYKDDPTIFAWELMNEARCPTDPSGTLLQEWIKEMAAHVKSIDNHHLLEVGLEGFYGESVPERQKYNPNN--TPVGTDFITNNQIPDVDFATIHIYPEQWLPPGNTSDEIQLAFVNRWIQAHIQDSDSILKKPILIGEFGKS 607
            ++LSLVNN + YGG+ +YV+WA + G  L + +D F+ +  ++ Y+KN++K +LTR NS+TG+ Y++DPTIFAWEL+NE RC TD SG  LQ+WI EM   +KSID+ HLL VGLEGFYG + P+    NP    + +GTDF+ N+   ++DFA++HIYP+ W    N + E +L FV +W+Q+HI+D    LKKP+L  EFG S
Sbjct:  136 LLLSLVNNLQAYGGKTQYVKWAWQEGVGLSSSNDSFFFDPSIRNYFKNYLKVLLTRKNSVTGIEYRNDPTIFAWELINEPRCTTDVSGKTLQDWIDEMTGFIKSIDDKHLLTVGLEGFYGPNSPKGLTVNPEQWASQLGTDFVQNSNSSNIDFASVHIYPDHWF--HNQTFEEKLKFVVKWMQSHIEDGLKELKKPVLFTEFGLS 338          
The following BLAST results are available for this feature:
BLAST of CX291726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
MAN3_ARATH1.262e-6251.72Mannan endo-1,4-beta-mannosidase 3 OS=Arabidopsis ... [more]
MAN7_ORYSJ4.796e-6253.40Mannan endo-1,4-beta-mannosidase 7 OS=Oryza sativa... [more]
MAN3_SOLLC3.109e-6156.16Mannan endo-1,4-beta-mannosidase 3 OS=Solanum lyco... [more]
MAN3_ORYSJ6.926e-6152.97Mannan endo-1,4-beta-mannosidase 3 OS=Oryza sativa... [more]
MAN4_ORYSJ8.466e-5950.75Mannan endo-1,4-beta-mannosidase 4 OS=Oryza sativa... [more]
MAN4_ARATH7.167e-5850.99Putative mannan endo-1,4-beta-mannosidase 4 OS=Ara... [more]
MAN2_ARATH2.306e-5649.76Mannan endo-1,4-beta-mannosidase 2 OS=Arabidopsis ... [more]
MANP_ARATH5.136e-5649.50Putative mannan endo-1,4-beta-mannosidase P OS=Ara... [more]
MAN5_ORYSJ8.761e-5651.94Putative mannan endo-1,4-beta-mannosidase 5 OS=Ory... [more]
MAN5_ARATH1.144e-5549.76Mannan endo-1,4-beta-mannosidase 5 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC04002G09SK FlavFr1 Citrus clementina cDNA clone C04002G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291726 ID=CX291726; Name=CX291726; organism=Citrus clementina; type=EST; length=617bp
TGTGATCCTAAGCTTAGTGAATAACTTCAAGGAGTATGGGGGAAGGCCAC
GTTATGTTGAATGGGCGAGAGAGCGTGGCCAGTCTTTGAAGAATGAGGAT
GACTTCTATACAAATGCTGTTGTCAAACAATACTACAAGAATCATGTTAA
GGCAGTGCTGACGAGAATCAACTCGATAACCGGCGTGGCATACAAGGATG
ATCCCACCATTTTTGCATGGGAACTCATGAACGAAGCTCGCTGCCCAACC
GATCCCTCTGGGACACTACTTCAGGAGTGGATTAAAGAAATGGCAGCGCA
TGTTAAGTCCATCGATAACCATCATCTGCTTGAAGTAGGTTTGGAAGGTT
TCTATGGGGAATCAGTACCAGAAAGGCAAAAATACAATCCCAACAACACT
CCTGTTGGTACTGATTTCATTACCAATAATCAGATCCCAGATGTTGATTT
CGCAACCATTCATATTTACCCCGAGCAATGGTTGCCACCAGGAAACACAA
GTGACGAAATTCAACTTGCATTTGTGAATAGATGGATCCAGGCTCATATC
CAGGACTCAGATTCAATTCTGAAGAAACCAATCCTCATTGGGGAGTTTGG
AAAGTCATATAAATATC
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