CX291788
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291788 vs. ExPASy Swiss-Prot
Match: RSSA_CANTR (40S ribosomal protein S0 OS=Candida tropicalis GN=RPS0 PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 7.736e-55 Identity = 105/180 (58.33%), Postives = 129/180 (71.67%), Query Frame = 3 Query: 87 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQ 626 P D +++LA VHLG+KN + YV+K R DG+ IIN+GKTWEK+ +AAR+I AI N D+ V S+R +GQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+I+TDPRTD Q IKE++ NIP IA D DSP YVD+ IP NNKGKHSIG ++WLLAR VL+ Sbjct: 4 PASFDLTPEDAKLLLAGNVHLGSKNVQVHNKPYVYKTRPDGVNIINIGKTWEKIVLAARIIAAIPNANDVAVCSSRTFGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEPRLVIVTDPRTDAQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLLAREVLR 183
BLAST of CX291788 vs. ExPASy Swiss-Prot
Match: RSSA_CANDC (40S ribosomal protein S0 OS=Candida dubliniensis (strain CD36 / CBS 7987 / NCPF 3949 / NRRL Y-17841) GN=RPS0 PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 7.736e-55 Identity = 104/181 (57.46%), Postives = 130/181 (71.82%), Query Frame = 3 Query: 87 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQM 629 P D +++LAA VHLG KN + YV+K R DG+ IIN+GKTWEK+ +AAR+I A+ N D+ V S+R +GQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+I+TDPRTD Q IKE++ NIP IA D DSP YVD+ IP NNKGKHSIG ++WL+AR VL++ Sbjct: 4 PASFDLTPEDAKLLLAANVHLGAKNVQVHNKPYVYKTRPDGMNIINIGKTWEKIVLAARIIAAVPNASDVAVCSSRTFGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEPRLVIVTDPRTDAQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLIAREVLRL 184
BLAST of CX291788 vs. ExPASy Swiss-Prot
Match: RSSA_CRYHO (40S ribosomal protein SA OS=Cryptosporidium hominis GN=Chro.30246 PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 1.723e-54 Identity = 99/178 (55.62%), Postives = 131/178 (73.60%), Query Frame = 3 Query: 87 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMV 620 P ++K DI M+ + H+GTKN + +M YV+KR ++GI++INL KTWEK+Q+AAR+I I+N D++V S RPYG R LKFA++T AHA+ GR TPGT TNQ+ F EPRLLI+TDPR D Q + E++ NIP IA CDTDSP++YVD+ IP NNKGK SI +++LLAR V Sbjct: 2 PPAETRKLDDIAKMIVCKTHIGTKNVEDKMLSYVYKRTHEGIFLINLAKTWEKIQIAARIIATIDNLADVVVVSQRPYGSRPALKFAQHTGAHAMVGRFTPGTLTNQITQKFMEPRLLIVTDPRVDSQAVIESSYANIPVIALCDTDSPLQYVDVAIPCNNKGKESIALMYYLLAREV 179
BLAST of CX291788 vs. ExPASy Swiss-Prot
Match: RSSA2_YEAST (40S ribosomal protein S0-B OS=Saccharomyces cerevisiae GN=RPS0B PE=1 SV=2) HSP 1 Score: 211.846 bits (538), Expect = 2.251e-54 Identity = 102/172 (59.30%), Postives = 128/172 (74.42%), Query Frame = 3 Query: 114 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQM 629 D Q++LAA HLG +N E YVF R DG+++IN+GKTWEKL +AAR+I AI NP D++ S+R YGQRAVLKFA +T A IAGR TPG+FTN + SF EPRL+I+TDPR D Q IKEA+ NIP IA D DSP +VD+ IP NN+GKHSIG +++LLAR VL++ Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVVAISSRTYGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRLDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRL 184
BLAST of CX291788 vs. ExPASy Swiss-Prot
Match: RSSA2_YEAS7 (40S ribosomal protein S0-B OS=Saccharomyces cerevisiae (strain YJM789) GN=RPS0B PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 2.251e-54 Identity = 102/172 (59.30%), Postives = 128/172 (74.42%), Query Frame = 3 Query: 114 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQM 629 D Q++LAA HLG +N E YVF R DG+++IN+GKTWEKL +AAR+I AI NP D++ S+R YGQRAVLKFA +T A IAGR TPG+FTN + SF EPRL+I+TDPR D Q IKEA+ NIP IA D DSP +VD+ IP NN+GKHSIG +++LLAR VL++ Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVVAISSRTYGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRLDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRL 184
BLAST of CX291788 vs. ExPASy Swiss-Prot
Match: RSSA2_YEAS1 (40S ribosomal protein S0-B OS=Saccharomyces cerevisiae (strain RM11-1a) GN=RPS0B PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 2.251e-54 Identity = 102/172 (59.30%), Postives = 128/172 (74.42%), Query Frame = 3 Query: 114 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQM 629 D Q++LAA HLG +N E YVF R DG+++IN+GKTWEKL +AAR+I AI NP D++ S+R YGQRAVLKFA +T A IAGR TPG+FTN + SF EPRL+I+TDPR D Q IKEA+ NIP IA D DSP +VD+ IP NN+GKHSIG +++LLAR VL++ Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVVAISSRTYGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRLDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRL 184
BLAST of CX291788 vs. ExPASy Swiss-Prot
Match: RSSA_DEBHA (40S ribosomal protein S0 OS=Debaryomyces hansenii GN=RPS0 PE=3 SV=3) HSP 1 Score: 211.075 bits (536), Expect = 3.839e-54 Identity = 101/172 (58.72%), Postives = 128/172 (74.42%), Query Frame = 3 Query: 114 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQM 629 D +++LAA VHLG+KN + YV+K R DG+ +IN+GKTWEK+ +AAR+I AI N D+ V S R +GQRAVLKFA +T A IAGR TPG FTN + SF EPRL+++TDPRTD Q IKE++ NIP IA D DSP YVD+ IP NNKGKHSIG ++WL+AR VL++ Sbjct: 13 DAKLLLAANVHLGSKNVQVHNKPYVYKTRPDGVNVINVGKTWEKIVLAARIIAAIPNAADVAVCSTRTFGQRAVLKFAAHTGATPIAGRFTPGNFTNYITRSFKEPRLVVVTDPRTDFQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLVAREVLRL 184
BLAST of CX291788 vs. ExPASy Swiss-Prot
Match: RSSA1_YEAST (40S ribosomal protein S0-A OS=Saccharomyces cerevisiae GN=RPS0A PE=1 SV=3) HSP 1 Score: 211.075 bits (536), Expect = 3.839e-54 Identity = 101/172 (58.72%), Postives = 129/172 (75.00%), Query Frame = 3 Query: 114 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQM 629 D Q++LAA HLG +N E YVF R DG+++IN+GKTWEKL +AAR+I AI NP D++ S+R +GQRAVLKFA +T A IAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKEA+ NIP IA D DSP +VD+ IP NN+GKHSIG +++LLAR VL++ Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRL 184
BLAST of CX291788 vs. ExPASy Swiss-Prot
Match: RSSA1_YEAS7 (40S ribosomal protein S0-A OS=Saccharomyces cerevisiae (strain YJM789) GN=RPS0A PE=3 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 3.839e-54 Identity = 101/172 (58.72%), Postives = 129/172 (75.00%), Query Frame = 3 Query: 114 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQM 629 D Q++LAA HLG +N E YVF R DG+++IN+GKTWEKL +AAR+I AI NP D++ S+R +GQRAVLKFA +T A IAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKEA+ NIP IA D DSP +VD+ IP NN+GKHSIG +++LLAR VL++ Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRL 184
BLAST of CX291788 vs. ExPASy Swiss-Prot
Match: RSSA1_YEAS1 (40S ribosomal protein S0-A OS=Saccharomyces cerevisiae (strain RM11-1a) GN=RPS0A PE=3 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 3.839e-54 Identity = 101/172 (58.72%), Postives = 129/172 (75.00%), Query Frame = 3 Query: 114 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQM 629 D Q++LAA HLG +N E YVF R DG+++IN+GKTWEKL +AAR+I AI NP D++ S+R +GQRAVLKFA +T A IAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKEA+ NIP IA D DSP +VD+ IP NN+GKHSIG +++LLAR VL++ Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRL 184 The following BLAST results are available for this feature:
BLAST of CX291788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291788 ID=CX291788; Name=CX291788; organism=Citrus clementina; type=EST; length=629bpback to top |