CX291793
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291793 vs. ExPASy Swiss-Prot
Match: UBE2N_DICDI (Probable ubiquitin-conjugating enzyme E2 N OS=Dictyostelium discoideum GN=ube2n PE=3 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.359e-17 Identity = 41/91 (45.05%), Postives = 59/91 (64.84%), Query Frame = 2 Query: 2 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVRE 274 F L L T+DYP P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PNP+ P ++ A + N++E R RE Sbjct: 52 FNLELFLTDDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEHWKTNEKEAMARARE 142
BLAST of CX291793 vs. ExPASy Swiss-Prot
Match: UBC12_YEAST (NEDD8-conjugating enzyme UBC12 OS=Saccharomyces cerevisiae GN=UBC12 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.864e-17 Identity = 38/86 (44.19%), Postives = 56/86 (65.12%), Query Frame = 2 Query: 14 LQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVR 271 L F E YP +PP V + ++FHPNI G++CL+IL+ WSP D+ +I+T + L +PNPN P N +AA+L E ++E+ VR Sbjct: 84 LDFNEVYPIEPPKVVCLKKIFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVR 169
BLAST of CX291793 vs. ExPASy Swiss-Prot
Match: Y1A1_ENCCU (Probable ubiquitin-conjugating enzyme E2 ECU01_1010 OS=Encephalitozoon cuniculi GN=ECU01_1010 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.965e-17 Identity = 40/108 (37.04%), Postives = 65/108 (60.19%), Query Frame = 2 Query: 5 KLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ--------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQ 286 K ++F YP +PPT++FVS+MFHPNIY DG +C+ IL+ ++W+P+ ++ I+ SI +L PN +SPAN +A+ ++ +N EY + V I + Sbjct: 86 KAVMKFPSSYPLRPPTLKFVSKMFHPNIYEDGKMCISILEEDKQQDSSVFGDPKDKWTPVQNIRTIVMSIVVILNSPNISSPANVDASVMYRDNPEEYIKEVIRIARE 193
BLAST of CX291793 vs. ExPASy Swiss-Prot
Match: UBC31_ARATH (Probable ubiquitin carrier protein E2 31 OS=Arabidopsis thaliana GN=UBC31 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.529e-16 Identity = 39/91 (42.86%), Postives = 60/91 (65.93%), Query Frame = 2 Query: 2 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVRE 274 F L+++F DYP KPP F + ++HPNI +GSIC++IL+++W+P V +L SI LL PNP+ P E +LF N+ ++++R RE Sbjct: 56 FNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNILKDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQRARE 146
BLAST of CX291793 vs. ExPASy Swiss-Prot
Match: UBC13_YEAST (Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae GN=UBC13 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.529e-16 Identity = 38/91 (41.76%), Postives = 58/91 (63.74%), Query Frame = 2 Query: 2 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVRE 274 F+L L +DYP + P VRF+++++HPNI G ICLD+L+ WSP + +L SIQ+LL PNPN P ++ A + +N++ + RE Sbjct: 52 FELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKARE 142
BLAST of CX291793 vs. ExPASy Swiss-Prot
Match: UBC8_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC8 PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 1.997e-16 Identity = 40/102 (39.22%), Postives = 69/102 (67.65%), Query Frame = 2 Query: 2 FKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILT-SIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWTAD 301 ++L ++ ++YP K P++ FV+++FHPNI A GSICLD++ + WSP+YD+ I+ I LL +PN + P N+EAA L +K+ Y +++E +++ T + Sbjct: 49 WRLHVELPDNYPYKSPSIGFVNKIFHPNIDIASGSICLDVINSTWSPLYDLINIVEWMIPGLLKEPNGSDPLNNEAATLQLRDKKLYEEKIKEYIDKYATKE 150
BLAST of CX291793 vs. ExPASy Swiss-Prot
Match: UB2G2_PONAB (Ubiquitin-conjugating enzyme E2 G2 OS=Pongo abelii GN=UBE2G2 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.997e-16 Identity = 40/109 (36.70%), Postives = 63/109 (57.80%), Query Frame = 2 Query: 2 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQS 289 F L F DYP PP +RF MFHPNIY DG +C+ IL +WSP+ V IL S+ S+L +PN S AN +A++++ +++ ++ + ++IV++S Sbjct: 54 FPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKS 162
BLAST of CX291793 vs. ExPASy Swiss-Prot
Match: UB2G2_MOUSE (Ubiquitin-conjugating enzyme E2 G2 OS=Mus musculus GN=Ube2g2 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.997e-16 Identity = 40/109 (36.70%), Postives = 63/109 (57.80%), Query Frame = 2 Query: 2 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQS 289 F L F DYP PP +RF MFHPNIY DG +C+ IL +WSP+ V IL S+ S+L +PN S AN +A++++ +++ ++ + ++IV++S Sbjct: 54 FPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKS 162
BLAST of CX291793 vs. ExPASy Swiss-Prot
Match: UB2G2_HUMAN (Ubiquitin-conjugating enzyme E2 G2 OS=Homo sapiens GN=UBE2G2 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.997e-16 Identity = 40/109 (36.70%), Postives = 63/109 (57.80%), Query Frame = 2 Query: 2 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQS 289 F L F DYP PP +RF MFHPNIY DG +C+ IL +WSP+ V IL S+ S+L +PN S AN +A++++ +++ ++ + ++IV++S Sbjct: 54 FPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKS 162
BLAST of CX291793 vs. ExPASy Swiss-Prot
Match: UB2G2_BOVIN (Ubiquitin-conjugating enzyme E2 G2 OS=Bos taurus GN=UBE2G2 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.997e-16 Identity = 40/109 (36.70%), Postives = 63/109 (57.80%), Query Frame = 2 Query: 2 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQS 289 F L F DYP PP +RF MFHPNIY DG +C+ IL +WSP+ V IL S+ S+L +PN S AN +A++++ +++ ++ + ++IV++S Sbjct: 54 FPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKVAKQIVQKS 162 The following BLAST results are available for this feature:
BLAST of CX291793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 222
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291793 ID=CX291793; Name=CX291793; organism=Citrus clementina; type=EST; length=650bpback to top |