CX291793
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291793 vs. ExPASy Swiss-Prot
Match: UBE2C_DICDI (Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum GN=ube2c PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.181e-22 Identity = 49/87 (56.32%), Postives = 69/87 (79.31%), Query Frame = 2 Query: 2 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNR 262 FK++L+F DYP KPPTV+F ++ FHPN+ +G+ICLDIL+++WSP+Y+V ++L SIQSLL +PN SP NS AA L+S N+ EY + Sbjct: 55 FKMSLKFPTDYPYKPPTVKFETQCFHPNVDNNGNICLDILKDKWSPVYNVRSLLISIQSLLGEPNNESPLNSYAASLWS-NQDEYKK 140
BLAST of CX291793 vs. ExPASy Swiss-Prot
Match: UBC20_ARATH (Ubiquitin carrier protein E2 20 OS=Arabidopsis thaliana GN=UBC20 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.579e-21 Identity = 49/92 (53.26%), Postives = 69/92 (75.00%), Query Frame = 2 Query: 2 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREI 277 ++L+L F+ DYP KPP V+F + FHPN+ G+ICLDILQ++WS YDV IL SIQSLL +PN +SP N++AA+L+S N+ EY + V ++ Sbjct: 84 YRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWS-NQEEYRKMVEKL 174
BLAST of CX291793 vs. ExPASy Swiss-Prot
Match: UBC11_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC11 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.746e-20 Identity = 44/95 (46.32%), Postives = 67/95 (70.53%), Query Frame = 2 Query: 2 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQ 286 FK++L+F ++YP PP ++F+S M+HPN+ G+ICLDIL+ +WS +Y+V IL S+QSLL +PN SP N+ AA L+ + EY ++V E+ Sbjct: 58 FKVSLKFPQNYPFHPPMIKFLSPMWHPNVDKSGNICLDILKEKWSAVYNVETILLSLQSLLGEPNNRSPLNAVAAELWDADMEEYRKKVLACYEE 152
BLAST of CX291793 vs. ExPASy Swiss-Prot
Match: UBC11_SCHPO (Ubiquitin-conjugating enzyme E2-20 kDa OS=Schizosaccharomyces pombe GN=ubc11 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.746e-20 Identity = 48/98 (48.98%), Postives = 69/98 (70.41%), Query Frame = 2 Query: 2 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNR----RVREIVE 283 FK+++ F +YP PPT+ F S M+HPN+ G+ICLDIL+++WS +Y+V IL S+QSLL +PN SP N++AA L+S++ EY R R +EI E Sbjct: 78 FKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDILKDKWSAVYNVQTILLSLQSLLGEPNNASPLNAQAAELWSKDPIEYKRLLMQRYKEIDE 175
BLAST of CX291793 vs. ExPASy Swiss-Prot
Match: UBC19_ARATH (Ubiquitin carrier protein E2 19 OS=Arabidopsis thaliana GN=UBC19 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.280e-20 Identity = 48/92 (52.17%), Postives = 68/92 (73.91%), Query Frame = 2 Query: 2 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREI 277 ++L+L F+ DYP K P V+F + FHPN+ G+ICLDILQ++WS YDV IL SIQSLL +PN +SP N++AA+L+S N+ EY + V ++ Sbjct: 85 YRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLWS-NQEEYRKMVEKL 175
BLAST of CX291793 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.280e-20 Identity = 47/98 (47.96%), Postives = 64/98 (65.31%), Query Frame = 2 Query: 2 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 295 F +T+ F DYP KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P E A ++ +K +Y E +SWT Sbjct: 50 FLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKY-----ESTARSWT 142
BLAST of CX291793 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.079e-20 Identity = 46/98 (46.94%), Postives = 64/98 (65.31%), Query Frame = 2 Query: 2 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 295 F +T+ F DYP KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P E A ++ +K +Y E ++WT Sbjct: 50 FLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKY-----ESTARTWT 142
BLAST of CX291793 vs. ExPASy Swiss-Prot
Match: UBC4_SCHPO (Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe GN=ubc4 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.079e-20 Identity = 44/91 (48.35%), Postives = 61/91 (67.03%), Query Frame = 2 Query: 2 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVRE 274 F L++ F DYP KPP V F +R++HPNI ++GSICLDIL++QWSP ++ +L SI SLL DPNP+ P E A ++ ++ Y RE Sbjct: 50 FFLSIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHVYKTDRSRYELSARE 140
BLAST of CX291793 vs. ExPASy Swiss-Prot
Match: UBE2C_SPISO (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.633e-20 Identity = 46/91 (50.55%), Postives = 64/91 (70.33%), Query Frame = 2 Query: 2 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVRE 274 +KLTL+F DYP KPP V+F + +HPN+ G+ICLDIL+ W+ YDV IL S+QSLL +PN SP N++AA ++S N+ EY + + E Sbjct: 79 YKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMWS-NQTEYKKVLHE 168
BLAST of CX291793 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.633e-20 Identity = 47/98 (47.96%), Postives = 64/98 (65.31%), Query Frame = 2 Query: 2 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 295 F +T+ F DYP KPP V F ++++HPNI ++GSICLDIL+ QWSP V+ +L SI SLL DPNP+ P E A ++ ++ +Y E QSWT Sbjct: 50 FLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDRVKY-----ESTAQSWT 142 The following BLAST results are available for this feature:
BLAST of CX291793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 222
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291793 ID=CX291793; Name=CX291793; organism=Citrus clementina; type=EST; length=650bpback to top |