CX291813

Overview
NameCX291813
Unique NameCX291813
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length621
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291813 vs. ExPASy Swiss-Prot
Match: CP1A1_PAGMA (Cytochrome P450 1A1 OS=Pagrus major GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.087e-11
Identity = 37/121 (30.58%), Postives = 63/121 (52.07%), Query Frame = 2
Query:  251 DLFIAGNDTTSITMEWAMAELLHNPEVLSKAKLELEQLVGRGNPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFL 613
            DLF AG DT S  + W++  L+  PE+  +   E+E ++G       SD T+L   +A + E FR    +P  I    ++D  +  + +PK   +++  W +  D++   +P SF P+RFL
Sbjct:  312 DLFGAGFDTISTALSWSVMYLVAYPEIQERLYQEMETVMGPDRMPCLSDRTQLTLPEAFILEIFRHSSFLPFTIPHCTTKDTSLNGYFIPKAPCIYIKQWPVIHDDDDVLDPSSFNPDRFL 432          
BLAST of CX291813 vs. ExPASy Swiss-Prot
Match: CP6A2_DROME (Cytochrome P450 6a2 OS=Drosophila melanogaster GN=Cyp6a2 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 6.644e-11
Identity = 44/138 (31.88%), Postives = 72/138 (52.17%), Query Frame = 2
Query:  218 IDRKNIKHLFADLFI---AGNDTTSITMEWAMAELLHNPEVLSKAKLELEQLVG-RGNPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIAS---FTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERF 610
            I+  +I  L A +F+   AG +T+S TM + + EL  N ++  + + E++ ++  +   +    I  + YL  V+ ET RL+  VP L  RK   D  +       + KG QV +   A  RDE+++ NP +F PERF
Sbjct:  292 IEGMDIGELAAQVFVFYVAGFETSSSTMSYCLYELAQNQDIQDRLRNEIQTVLEEQEGQLTYESIKAMTYLNQVISETLRLYTLVPHL-ERKALNDYVVPGHEKLVIEKGTQVIIPACAYHRDEDLYPNPETFDPERF 428          
BLAST of CX291813 vs. ExPASy Swiss-Prot
Match: CP4AP_PIG (Cytochrome P450 4A25 OS=Sus scrofa GN=CYP4A25 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.644e-11
Identity = 34/116 (29.31%), Postives = 65/116 (56.03%), Query Frame = 2
Query:  266 GNDTTSITMEWAMAELLHNPEVLSKAKLELEQLVGRGNPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIA-SFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERF 610
            G+DTT+  + W +  L  +PE   + + E++ L+G G  I    + ++PY    +KE  RL+P VP  ++R++S+ +      ++P G  + ++V+++  +  +W NP  F P RF
Sbjct:  316 GHDTTASGISWILYALASHPEHQQRCREEIQGLLGDGTSITWDHLDQMPYTTMCIKEALRLYPPVP-GVSRELSKPITFPDGRSLPAGIILSLSVYSLHHNPQVWPNPEEFDPSRF 430          
BLAST of CX291813 vs. ExPASy Swiss-Prot
Match: CP4AO_PIG (Cytochrome P450 4A24 OS=Sus scrofa GN=CYP4A24 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.644e-11
Identity = 33/116 (28.45%), Postives = 64/116 (55.17%), Query Frame = 2
Query:  266 GNDTTSITMEWAMAELLHNPEVLSKAKLELEQLVGRGNPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIA-SFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERF 610
            G+DTT+  + W +  L  +PE   + + E++ L+G G  I    + ++PY    +KE  RL+P VP  ++R++S+ +      ++P G  + ++++ +  +  +W NP  F P RF
Sbjct:  316 GHDTTASGISWILYALASHPEHQQRCREEIQGLLGDGTSITWDHLDQMPYTTMCIKEALRLYPPVP-GVSRELSKPITFPDGRSLPAGITLSLSIYGLHHNPQVWPNPEEFDPSRF 430          
BLAST of CX291813 vs. ExPASy Swiss-Prot
Match: CP4AC_RAT (Cytochrome P450 4A12 OS=Rattus norvegicus GN=Cyp4a12 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 6.644e-11
Identity = 36/116 (31.03%), Postives = 60/116 (51.72%), Query Frame = 2
Query:  266 GNDTTSITMEWAMAELLHNPEVLSKAKLELEQLVGRGNPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIA-SFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERF 610
            G+DTT+  + W    L  NPE     + E++ L+G G  I   D+ ++PY    +KE  R++P V   ++R +S  V      ++PKG  V ++ + +  +  +W NP  F P RF
Sbjct:  320 GHDTTASGISWIFYALATNPEHQQGCRKEIQSLLGDGASITWDDLDKMPYTTMCIKEALRIYPPV-TAVSRMLSTPVTFPDGRSLPKGITVMLSFYGLHHNPTVWPNPEVFDPYRF 434          
BLAST of CX291813 vs. ExPASy Swiss-Prot
Match: CP4AB_HUMAN (Cytochrome P450 4A11 OS=Homo sapiens GN=CYP4A11 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.644e-11
Identity = 36/116 (31.03%), Postives = 63/116 (54.31%), Query Frame = 2
Query:  266 GNDTTSITMEWAMAELLHNPEVLSKAKLELEQLVGRGNPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIA-SFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERF 610
            G+DTT+  + W +  L  +P+   + + E+  L+G G  I  + + ++PY    +KE  RL+P VP  I R++S  V      ++PKG  V ++++ +  +  +W NP  F P RF
Sbjct:  322 GHDTTASGISWILYALATHPKHQERCREEIHSLLGDGASITWNHLDQMPYTTMCIKEALRLYPPVP-GIGRELSTPVTFPDGRSLPKGIMVLLSIYGLHHNPKVWPNPEVFDPFRF 436          
BLAST of CX291813 vs. ExPASy Swiss-Prot
Match: CP3AH_CAVPO (Cytochrome P450 3A17 OS=Cavia porcellus GN=CYP3A17 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.644e-11
Identity = 41/117 (35.04%), Postives = 60/117 (51.28%), Query Frame = 2
Query:  260 IAGNDTTSITMEWAMAELLHNPEVLSKAKLELEQLVGRGNPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERF 610
            +AG +TTS T+ + M  L  +P+V  K + E+++ +          +  + YL  VV ET RL+P V   I R   +D EI   + PKG  V +  +A+ RD   W  P  F PERF
Sbjct:  304 VAGYETTSSTLCFIMYSLATHPDVQKKLQQEIDKTLPNKAFPTYDVMMEMEYLDMVVNETLRLYP-VTNRIERMSKKDFEINGMSFPKGTGVMIPSFALHRDSKYWPEPDEFRPERF 419          
BLAST of CX291813 vs. ExPASy Swiss-Prot
Match: CP302_DROME (Cytochrome P450 302a1, mitochondrial OS=Drosophila melanogaster GN=dib PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 6.644e-11
Identity = 43/138 (31.16%), Postives = 71/138 (51.45%), Query Frame = 2
Query:  206 KSVEIDRKNIKHLFADLFIAGNDTTSITMEWAMAELLHNPEVLSKAKLELEQLVGRGNPIEESDITR--LPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFL 613
            K+ E+DR ++    ADL +AG DTTS    + +  +  NPEV  K   E  +++         D  R  + Y +AV+KE+ RL+P + + + R +++D   + + VPKG  V        R E  + +P  F P+R+L
Sbjct:  277 KNPELDRSDVVGTAADLLLAGIDTTSYASAFLLYHIARNPEVQQKLHEEARRVLPSAKDELSMDALRTDITYTRAVLKESLRLNP-IAVGVGRILNQDAIFSGYFVPKGTTVVTQNMVACRLEQHFQDPLRFQPDRWL 413          
BLAST of CX291813 vs. ExPASy Swiss-Prot
Match: CP2M1_ONCMY (Cytochrome P450 2M1 OS=Oncorhynchus mykiss GN=cyp2m1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.644e-11
Identity = 37/135 (27.41%), Postives = 66/135 (48.89%), Query Frame = 2
Query:  209 SVEIDRKNIKHLFADLFIAGNDTTSITMEWAMAELLHNPEVLSKAKLELEQLVGRGNPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFL 613
            + E +  N+      LF AG +TTS T+  +   ++  P +    + E+++++G   P  + D  ++PY  AV+ E  R     P  +  KV  D E  ++ +P+G  V   + ++  D  ++ NP  F PE FL
Sbjct:  286 NTEFNNGNMVMTAWSLFAAGTETTSSTLRQSFLMMIKYPHIQESVQKEIDEVIGSRVPTVD-DRVKMPYTDAVIHEVQRYMDLSPTSVPHKVMRDTEFYNYHIPEGTMVLPLLSSVLVDPKLFKNPDEFDPENFL 419          
BLAST of CX291813 vs. ExPASy Swiss-Prot
Match: C555A_DICDI (Probable cytochrome P450 555A1 OS=Dictyostelium discoideum GN=cyp555a1 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.644e-11
Identity = 36/125 (28.80%), Postives = 65/125 (52.00%), Query Frame = 2
Query:  251 DLFIAGNDTTSITMEWAMAELLHNPEVLSKAKLELEQ--LVGRGNPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGS 619
            DL IAG+DT S+     +  L +   + +K   E+    ++   N I  S+ ++ PY  +V+KE  R     PL    + ++D+ +  + +P G Q+  NV++   ++  W+NP  F P+RFL +
Sbjct:  291 DLMIAGSDTNSLFTIHLIIALTNRENIQNKVFNEILNFYILNENNKITFSNKSKTPYYNSVLKEVERRFTVSPLSQPHRTNKDIILNGYFIPSGSQIIQNVYSCHLNDKDWENPFQFNPDRFLNN 415          
The following BLAST results are available for this feature:
BLAST of CX291813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP1A1_PAGMA5.087e-1130.58Cytochrome P450 1A1 OS=Pagrus major GN=cyp1a1 PE=2... [more]
CP6A2_DROME6.644e-1131.88Cytochrome P450 6a2 OS=Drosophila melanogaster GN=... [more]
CP4AP_PIG6.644e-1129.31Cytochrome P450 4A25 OS=Sus scrofa GN=CYP4A25 PE=2... [more]
CP4AO_PIG6.644e-1128.45Cytochrome P450 4A24 OS=Sus scrofa GN=CYP4A24 PE=2... [more]
CP4AC_RAT6.644e-1131.03Cytochrome P450 4A12 OS=Rattus norvegicus GN=Cyp4a... [more]
CP4AB_HUMAN6.644e-1131.03Cytochrome P450 4A11 OS=Homo sapiens GN=CYP4A11 PE... [more]
CP3AH_CAVPO6.644e-1135.04Cytochrome P450 3A17 OS=Cavia porcellus GN=CYP3A17... [more]
CP302_DROME6.644e-1131.16Cytochrome P450 302a1, mitochondrial OS=Drosophila... [more]
CP2M1_ONCMY6.644e-1127.41Cytochrome P450 2M1 OS=Oncorhynchus mykiss GN=cyp2... [more]
C555A_DICDI6.644e-1128.80Probable cytochrome P450 555A1 OS=Dictyostelium di... [more]

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Properties
Property NameValue
Genbank descriptionC04005D04SK FlavFr1 Citrus clementina cDNA clone C04005D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291813 ID=CX291813; Name=CX291813; organism=Citrus clementina; type=EST; length=621bp
GCCTAACTTGTCCGACCATTTTCCTCTACTAAAAATGCTTGACCTGCAGG
GGATAAGGCGCCGCAACACACTTTATGCTGGCAAGATGTTCGAGGTGTTG
GATCGTTTGATTGATCAACGATTGAAGCAAAGACAAGAACATGGTTGCAG
TATTAGCACTGAATATAAAGATATATTAGATATTCTTCTCAATATTATAC
AAGACAAGAGTGTAGAGATTGACAGAAAAAATATCAAGCATTTGTTTGCG
GATTTGTTTATTGCGGGGAATGACACAACTTCAATTACAATGGAATGGGC
AATGGCAGAACTACTCCACAATCCTGAGGTATTATCGAAAGCAAAATTGG
AGTTAGAACAACTGGTTGGCAGAGGCAACCCAATTGAAGAATCTGACATC
ACTCGGTTACCTTATCTACAAGCAGTTGTTAAAGAAACTTTTAGGTTGCA
CCCGGCAGTTCCTTTATTAATCGCCCGCAAAGTCTCTGAAGATGTTGAAA
TTGCAAGCTTCACAGTGCCGAAAGGTGGGCAAGTTTTTGTTAACGTATGG
GCTATTGGTAGAGATGAAAACATATGGGACAATCCTCACTCTTTTGTACC
CGAAAGATTTTTGGGGTCAGA
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