CX291891

Overview
NameCX291891
Unique NameCX291891
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length557
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: IAAT_MAIZE (Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 2.701e-63
Identity = 109/171 (63.74%), Postives = 128/171 (74.85%), Query Frame = 2
Query:    8 AEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPS-CNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCC---NSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 508
            A  GT AARIWART CQFDASG+G C TGDC G+++C GYG APNTLAEYALKQFN++DF D+S +DGFNVP  F     S C+R  +C  ++   CP EL+  G CN  CPVFK DEYCC    + NC PT +S++FK +CPD YSYPKDDATSTFTCP GT+YKVVFCP
Sbjct:   36 APAGTTAARIWARTGCQFDASGRGSCRTGDCGGVVQCTGYGRAPNTLAEYALKQFNNLDFFDISILDGFNVPYSFLPDGGSGCSRGPRCAVDVNARCPAELRQDGVCNNACPVFKKDEYCCVGSAANNCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 206          
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: OS35_SOLCO (Osmotin-like protein OSML15 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 3.528e-63
Identity = 106/170 (62.35%), Postives = 126/170 (74.12%), Query Frame = 2
Query:    8 AEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRV--IKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPT-GTDYKVVFCP 508
            A PGTK ARIW RT C FD +G+G C+TGDC G+LEC+G+G  PNTLAEYAL QF+++DF D+S IDGFN+PM F   +P   +   I+C ANI GECP  L+VPGGCN PC  F   +YCC  G CGPT  S+FFK RCPD YSYP+DD TSTFTC +  TDYKV+FCP
Sbjct:   58 APPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKGWGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTNPGPGKCHPIQCVANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCQSWTTDYKVMFCP 227          
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: OLPA_TOBAC (Osmotin-like protein OS=Nicotiana tabacum GN=OLPA PE=1 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 6.017e-63
Identity = 106/170 (62.35%), Postives = 126/170 (74.12%), Query Frame = 2
Query:    8 AEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRV--IKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPT-GTDYKVVFCP 508
            A PGTK ARIW RT C FD +G+G C+TGDC G+LEC+G+G  PNTLAEYAL QF+++DF D+S IDGFN+PM F    P   +   I+CTANI GECP  L+VPGGCN PC  F   +YCC  G CGPT  S++FK RCPD YSYP+DD TSTFTC +  TDYKV+FCP
Sbjct:   58 APPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKGWGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCP 227          
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: PRR2_TOBAC (Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.026e-62
Identity = 107/167 (64.07%), Postives = 127/167 (76.05%), Query Frame = 2
Query:   14 PGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNS--GNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 508
            PGT  ARIW RT C FD SG+G CETGDCNG+LECQGYG  PNTLAE+AL Q N  DF+D+S +DGFN+PMEFS  +  C R ++CTA I  +CP +LK  GGCN PC V KT+E+CC +  G+CGPT  S+FFK RCPD YSYP+DD  S FTCP GT+Y+VVFCP
Sbjct:   62 PGTVQARIWGRTNCNFDGSGRGNCETGDCNGMLECQGYGKPPNTLAEFALNQPN-QDFVDISLVDGFNIPMEFSPTNGGC-RNLRCTAPINEQCPAQLKTQGGCNNPCTVIKTNEFCCTNGPGSCGPTDLSRFFKARCPDAYSYPQDDPPSLFTCPPGTNYRVVFCP 226          
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: THM2_THADA (Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 5.106e-54
Identity = 95/167 (56.89%), Postives = 121/167 (72.46%), Query Frame = 2
Query:   11 EPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVP-GGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 508
            EPGTK  +IWART C FD SG+G C TGDC GLL+C+ +G  P TLAE++L Q+   D+ID+SNI GFNVPM+FS  +  C R ++C A+I+G+CP +LK P GGCN  C VF+T EYCC +G CGPT +S+FFK  CPD +SY  D  T T TCP  ++Y+V FCP
Sbjct:   64 EPGTKGGKIWARTDCYFDDSGRGICRTGDCGGLLQCKRFGRPPTTLAEFSLNQYG-KDYIDISNIKGFNVPMDFSPTTRGC-RGVRCAADIVGQCPAKLKAPGGGCNDACTVFQTSEYCCTTGKCGPTEYSRFFKRLCPDAFSYVLDKPT-TVTCPGSSNYRVTFCP 227          
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: THM1_THADA (Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 7.373e-53
Identity = 94/167 (56.29%), Postives = 118/167 (70.66%), Query Frame = 2
Query:   11 EPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVP-GGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 508
            EPGT   +IWART C FD SG G C+TGDC GLL C+ +G  P TLAE++L Q+   D+ID+SNI GFNVPM FS  +  C R ++C A+I+G+CP +LK P GGCN  C VF+T EYCC +G CGPT +S+FFK  CPD +SY  D  T T TCP  ++Y+V FCP
Sbjct:   42 EPGTNGGKIWARTDCYFDDSGSGICKTGDCGGLLRCKRFGRPPTTLAEFSLNQYG-KDYIDISNIKGFNVPMNFSPTTRGC-RGVRCAADIVGQCPAKLKAPGGGCNDACTVFQTSEYCCTTGKCGPTEYSRFFKRLCPDAFSYVLDKPT-TVTCPGSSNYRVTFCP 205          
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: PRR3_JUNAS (Pathogenesis-related protein OS=Juniperus ashei PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.102e-48
Identity = 90/167 (53.89%), Postives = 110/167 (65.87%), Query Frame = 2
Query:   17 GTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSG---NCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 508
            GT +AR W RT C FDASGKG C+TGDC G L C   GA P TLAEY     +D D+ D+S +DGFN+P+  +  +  C     C A+I   CP+ELKV GGCN  C VFKTD+YCC +    NC  T +SK FK++CP  YSY KDD T+TF C +GTDY +VFCP
Sbjct:   64 GTASARFWGRTGCTFDASGKGSCQTGDCGGQLSCTVSGAVPATLAEYTQ---SDQDYYDVSLVDGFNIPLAINPTNAQCT-APACKADINAVCPSELKVDGGCNSACNVFKTDQYCCRNAYVDNCPATNYSKIFKNQCPQAYSYAKDD-TATFACASGTDYSIVFCP 225          
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: PR5_ARATH (Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 1.949e-37
Identity = 81/177 (45.76%), Postives = 100/177 (56.50%), Query Frame = 2
Query:   14 PGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEF--SSVSPSCNRVIKCTANILGECPNELKVPG-----GCNGPCPVFKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 508
            P   + R WART C FDASG G+C TGDC GL  C G G  P TLAE+ L      DF D+S +DG+NV +    S  S  C +   C +++   CP+ LKV        C   C  F TD+YCC   N     C PT +S+ FK+ CPD YSY  DD TSTFTC TG +Y++ FCP
Sbjct:   66 PAGWSGRFWARTGCNFDASGNGRCVTGDCGGL-RCNGGGVPPVTLAEFTLVGDGGKDFYDVSLVDGYNVKLGIRPSGGSGDC-KYAGCVSDLNAACPDMLKVMDQNNVVACKSACERFNTDQYCCRGANDKPETCPPTDYSRIFKNACPDAYSYAYDDETSTFTC-TGANYEITFCP 239          
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: TLP1_PYRPY (Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.708e-33
Identity = 75/176 (42.61%), Postives = 95/176 (53.98%), Query Frame = 2
Query:   26 AARIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFS--SVSPSCNRVIKCTANILGECPNELKVPG------GCNGPCPVFKTDEYCCNSG-----NCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 508
            + R W R+ C  D+SGK KC TGDC +G + C G GA+P  +L E  L      DF D+S +DGFN+P++ +    S  CN    C ANI   CP EL   G      GC   C      +YCC         C PT FSK FK++CP  YSY  DD +STFTC  G +Y++ FCP
Sbjct:   70 SGRFWGRSHCSIDSSGKFKCSTGDCGSGQISCNGAGASPPASLVELTLATNGGQDFYDVSLVDGFNLPIKLAPRGGSGDCNST-SCAANINTVCPAELSDKGSDGSVIGCKSACLALNQPQYCCTGAYGTPDTCPPTDFSKVFKNQCPQAYSYAYDDKSSTFTCFGGPNYEITFCP 244          
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: TLP_PRUAV (Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.224e-31
Identity = 75/176 (42.61%), Postives = 93/176 (52.84%), Query Frame = 2
Query:   32 RIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 508
            R WART C  DASGK  C T DC +G + C G GA P  TLAE+ +      DF D+S +DGFN+PM   SV+P       +   C AN+   CP+EL+  G       C   C  F T +YCC         C PT +S+ F + CPD YSY  DD   TFTC  G +Y + FCP
Sbjct:   73 RFWARTGCSTDASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPM---SVTPQGGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 245          
The following BLAST results are available for this feature:
BLAST of CX291891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
IAAT_MAIZE2.701e-6363.74Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 S... [more]
OS35_SOLCO3.528e-6362.35Osmotin-like protein OSML15 OS=Solanum commersonii... [more]
OLPA_TOBAC6.017e-6362.35Osmotin-like protein OS=Nicotiana tabacum GN=OLPA ... [more]
PRR2_TOBAC1.026e-6264.07Pathogenesis-related protein R minor form OS=Nicot... [more]
THM2_THADA5.106e-5456.89Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1[more]
THM1_THADA7.373e-5356.29Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1[more]
PRR3_JUNAS1.102e-4853.89Pathogenesis-related protein OS=Juniperus ashei PE... [more]
PR5_ARATH1.949e-3745.76Pathogenesis-related protein 5 OS=Arabidopsis thal... [more]
TLP1_PYRPY1.708e-3342.61Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1... [more]
TLP_PRUAV1.224e-3142.61Glucan endo-1,3-beta-glucosidase OS=Prunus avium P... [more]

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Properties
Property NameValue
Genbank descriptionC04006F07SK FlavFr1 Citrus clementina cDNA clone C04006F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291891 ID=CX291891; Name=CX291891; organism=Citrus clementina; type=EST; length=557bp
GCACGAGGCCGAGCCAGGCACAAAAGCAGCCCGCATTTGGGCTCGAACCA
AATGCCAGTTTGATGCTTCCGGCAAAGGCAAATGCGAGACCGGTGACTGT
AACGGACTCCTCGAGTGCCAAGGCTACGGTGCAGCACCTAACACCTTGGC
CGAGTACGCGTTGAAGCAATTCAATGACATGGATTTCATTGACATGTCCA
ACATTGACGGATTCAATGTTCCCATGGAATTTAGCTCTGTCTCTCCCTCA
TGCAACCGCGTGATCAAGTGCACTGCTAACATTCTTGGCGAGTGCCCGAA
TGAATTGAAGGTTCCTGGAGGATGTAACGGGCCGTGCCCCGTGTTCAAGA
CCGACGAGTACTGTTGCAATTCAGGCAACTGCGGACCTACAGGTTTCTCC
AAGTTTTTCAAGGATAGGTGCCCGGATGTTTACAGTTACCCTAAGGATGA
CGCTACCAGCACATTTACTTGCCCGACTGGGACAGACTACAAGGTTGTAT
TCTGCCCCTGAAGCATTTTTTTTCAGGGGTAGAAATGGAAATAGAAAACT
ATACGAC
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