CX291891

Overview
NameCX291891
Unique NameCX291891
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length557
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: TP1B_MALDO (Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.598e-31
Identity = 73/182 (40.11%), Postives = 94/182 (51.65%), Query Frame = 2
Query:   14 PGTKAARIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 508
            P   + R W RT+C  DA+GK  CET DC +G + C G GA P  TL E  +      D+ D+S +DGFN+PM   SV+P       +   C AN+   CP +L+V         C   C  F   +YCC   N     C PT +S+ F+ +CP  YSY  DD  STFTC  G DY + FCP
Sbjct:   34 PSPWSGRFWGRTRCSTDAAGKFSCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPM---SVAPQGGTGECKPSSCPANVNMACPAQLQVKAADGSVISCKSACLAFGDSKYCCTPPNDTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 212          
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: TP1A_MALDO (Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 4.650e-31
Identity = 73/182 (40.11%), Postives = 93/182 (51.10%), Query Frame = 2
Query:   14 PGTKAARIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 508
            P   + R W RT+C  DA+GK  CET DC +G + C G GA P  TL E  +      D+ D+S +DGFN+PM   SV+P       +   C AN+   CP  L+V         C   C  F   +YCC   N     C PT +S+ F+ +CP  YSY  DD  STFTC  G DY + FCP
Sbjct:   68 PSPWSGRFWGRTRCSTDAAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPM---SVAPQGGTGECKPSSCPANVNKVCPAPLQVKAADGSVISCKSACLAFGDSKYCCTPPNNTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 246          
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: TLP2_PRUPE (Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 6.073e-31
Identity = 74/178 (41.57%), Postives = 95/178 (53.37%), Query Frame = 2
Query:   26 AARIWARTKCQFDASGKGKCETGDCN-GLLECQGY-GAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCN-----SGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 508
            + R WART+C  DASGK  CET DC+ G L C G  G  P TLAE+ +      DF D+S +DGFN+PM   SV+P       ++  C AN+   CP+EL+  G       C   C  F   +YCC         C PT +S+ F ++CPD YSY  DD    FTC  G +Y + FCP
Sbjct:   68 SGRFWARTRCSTDASGKFVCETADCDSGQLMCNGKTGIPPATLAEFTIAAGGGQDFYDVSLVDGFNLPM---SVTPQGGTGTCKMGSCAANVNLVCPSELQKIGSDGSVVACLSACVKFGEPQYCCTPPQETKEKCPPTNYSQIFHEQCPDAYSYAFDDNKGLFTCSGGPNYLITFCP 242          
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: TLP1_CASSA (Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 5.141e-30
Identity = 69/173 (39.88%), Postives = 93/173 (53.76%), Query Frame = 2
Query:   32 RIWARTKCQFDASGKGKCETGDCN-GLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN-RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCNSG-----NCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 508
            R WART+C  + SGK  CET DC+ G + C G GA P  +L E  +     MDF D+S +DG+N+P+  ++   + + +   C AN+   CP EL+V G       C   C  F   +YCC         C  T +S+ FK +CP  YSY  DD+TSTFTC    DY + FCP
Sbjct:   72 RFWARTRCTTN-SGKFTCETADCSTGQVACNGNGAIPPASLVEINIAANRGMDFYDVSLVDGYNLPVSVATRGGTGDCKATSCRANVNAVCPAELQVKGSDASVLACKSACTAFNQPQYCCTGAFDTARTCPATKYSRIFKQQCPQAYSYAYDDSTSTFTCSGAPDYVITFCP 243          
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: TLP1_PRUPE (Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.145e-29
Identity = 74/182 (40.66%), Postives = 92/182 (50.55%), Query Frame = 2
Query:   14 PGTKAARIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 508
            P   + R + RT+C  DASGK  C T DC +G + C G GAAP  TL E  +      DF D+S +DGFN+PM   SV+P       +   C A+I   CP  L+V G       C   C  F   +YCC   N     C P  +SK FK +CP  YSY  DD +STFTC     Y + FCP
Sbjct:   68 PSPWSGRFFGRTRCSTDASGKFTCATADCGSGQVSCNGNGAAPPATLVEITIASNGGQDFYDVSLVDGFNLPM---SVAPQGGTGKCKASTCPADINKVCPAPLQVKGSDGSVIACKSACLAFNQPKYCCTPPNDKPETCPPPDYSKLFKTQCPQAYSYAYDDKSSTFTCSGRPAYLITFCP 246          
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: TLPH_ARATH (Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 4.812e-28
Identity = 72/180 (40.00%), Postives = 91/180 (50.56%), Query Frame = 2
Query:   14 PGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGA-APNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSV--SPSCNRVIKCTANILGECPNELKVPG-------GCNGPCPVFKTDEYCC-----NSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 508
            P   + R W R  C FD SG+G C TGDC G L C G G   P TLAE  L    ++DF D+S +DG+N+ M    V  S  C+    C +++   CP  L+V          C   C  F + +YCC     N  +C PT +SK FK  CP  YSY  DD TS  TC +  +Y V FCP
Sbjct:   64 PPLWSGRFWGRHGCTFDRSGRGHCATGDCGGSLSCNGAGGEPPATLAEITLGP--ELDFYDVSLVDGYNLAMSIMPVKGSGQCS-YAGCVSDLNQMCPVGLQVRSRNGKRVVACKSACSAFNSPQYCCTGLFGNPQSCKPTAYSKIFKVACPKAYSYAYDDPTSIATC-SKANYIVTFCP 239          
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: OLP1_SOLLC (Osmotin-like protein OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.119e-27
Identity = 70/190 (36.84%), Postives = 98/190 (51.58%), Query Frame = 2
Query:    2 HEAEPGTKA---ARIWARTKCQFDASGKGKCETGDCNGLLECQGYG-AAPNTLAEYALKQFN-DMDFIDMSNIDGFNVPMEFSSVSPSCNR----VIKCTANILGECPNELKVPG--------GCNGPCPVFKTDEYCCNSG-----NCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFC 505
            H + P   A    RIWART C +   GK  C TGDC G +EC G G AAP TLA++ L   + D     +S +DGFN+P+   +V+P   +    V+ C AN+L  CP  L+           GC   C  FK+DE+CC +       C P+ +S+FFK  CP  ++Y  D  +    C +  + KV+FC
Sbjct:   66 HRSFPAPNAHWSGRIWARTGCNYQ-HGKFYCATGDCGGRIECDGLGGAAPATLAQFVLHHGHADFSTYGVSLVDGFNIPL---TVTPHEGKGVCPVVGCRANLLESCPAVLQFRSHGGHGPVVGCKSACEAFKSDEFCCRNHYNSPQTCKPSSYSQFFKHACPATFTYAHDSPSLMHECSSPRELKVIFC 251          
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: TLPH_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.185e-26
Identity = 69/179 (38.55%), Postives = 87/179 (48.60%), Query Frame = 2
Query:   14 PGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQG-YGAAPNTLAEYAL-KQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN-RVIKCTANILGECPNELKV------PGGCNGPCPVFKTDEYCC-----NSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 508
            P   + R+W R  C FD+ G+G C TGDC G+L C G  GA P T+ E  L    + M F D+S +DGFN P+  ++V          C A++   CP+ L+V        GC   C     D YCC     +   C PT FS  FK  CP  YSY  DDATS   C     Y + FCP
Sbjct:   72 PAGWSGRVWPRRGCSFDSRGRGSCATGDCGGVLRCNGAAGATPATVVEMTLGTSASAMHFYDVSLVDGFNAPVSMAAVGGGVGCGTAACGADVNVCCPSALEVRDREGRVAGCRSACRAMGGDRYCCTGDYASPSACRPTIFSHLFKAICPRAYSYAYDDATSLNRC-HAKRYLITFCP 249          
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: TLP_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os12g0628600 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.300e-20
Identity = 56/164 (34.15%), Postives = 73/164 (44.51%), Query Frame = 2
Query:   17 GTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 508
            GT + R+W RT C FD SG+G C TGDC G L C   G  P TLAE+ +      DF D+S IDG+NV M FS           C++ +   C +                                      RCPD Y +P+D+ T T  C   ++Y+VVFCP
Sbjct:   65 GTSSGRVWGRTGCSFDGSGRGSCATGDCAGALSCTLSGQKPLTLAEFTIG--GSQDFYDLSVIDGYNVAMSFS-----------CSSGVTVTCRD-------------------------------------SRCPDAYLFPEDN-TKTHACSGNSNYQVVFCP 177          
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: TLP_WHEAT (Thaumatin-like protein PWIR2 OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.314e-17
Identity = 55/164 (33.54%), Postives = 70/164 (42.68%), Query Frame = 2
Query:   17 GTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 508
            GT+A RIWART C F+  G G C+TGDC G L C   G  P TLAEY +   +  DF D+S IDGFN+ M+FS           C+                          D   C   +C P           P  Y +P D   +T  C    +Y++ FCP
Sbjct:   59 GTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCSLSGRPPATLAEYTIGGGSTQDFYDISVIDGFNLAMDFS-----------CSTG------------------------DALQCRDPSCPP-----------PQAYQHPND--VATHACSGNNNYQITFCP 173          
The following BLAST results are available for this feature:
BLAST of CX291891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
TP1B_MALDO1.598e-3140.11Thaumatin-like protein 1b (Fragment) OS=Malus dome... [more]
TP1A_MALDO4.650e-3140.11Thaumatin-like protein 1a OS=Malus domestica GN=TL... [more]
TLP2_PRUPE6.073e-3141.57Thaumatin-like protein 2 OS=Prunus persica PE=2 SV... [more]
TLP1_CASSA5.141e-3039.88Thaumatin-like protein 1 OS=Castanea sativa GN=TL1... [more]
TLP1_PRUPE1.145e-2940.66Thaumatin-like protein 1 OS=Prunus persica PE=2 SV... [more]
TLPH_ARATH4.812e-2840.00Thaumatin-like protein OS=Arabidopsis thaliana GN=... [more]
OLP1_SOLLC3.119e-2736.84Osmotin-like protein OS=Solanum lycopersicum PE=1 ... [more]
TLPH_ORYSJ1.185e-2638.55Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
TLP_ORYSJ6.300e-2034.15Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
TLP_WHEAT1.314e-1733.54Thaumatin-like protein PWIR2 OS=Triticum aestivum ... [more]

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Properties
Property NameValue
Genbank descriptionC04006F07SK FlavFr1 Citrus clementina cDNA clone C04006F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291891 ID=CX291891; Name=CX291891; organism=Citrus clementina; type=EST; length=557bp
GCACGAGGCCGAGCCAGGCACAAAAGCAGCCCGCATTTGGGCTCGAACCA
AATGCCAGTTTGATGCTTCCGGCAAAGGCAAATGCGAGACCGGTGACTGT
AACGGACTCCTCGAGTGCCAAGGCTACGGTGCAGCACCTAACACCTTGGC
CGAGTACGCGTTGAAGCAATTCAATGACATGGATTTCATTGACATGTCCA
ACATTGACGGATTCAATGTTCCCATGGAATTTAGCTCTGTCTCTCCCTCA
TGCAACCGCGTGATCAAGTGCACTGCTAACATTCTTGGCGAGTGCCCGAA
TGAATTGAAGGTTCCTGGAGGATGTAACGGGCCGTGCCCCGTGTTCAAGA
CCGACGAGTACTGTTGCAATTCAGGCAACTGCGGACCTACAGGTTTCTCC
AAGTTTTTCAAGGATAGGTGCCCGGATGTTTACAGTTACCCTAAGGATGA
CGCTACCAGCACATTTACTTGCCCGACTGGGACAGACTACAAGGTTGTAT
TCTGCCCCTGAAGCATTTTTTTTCAGGGGTAGAAATGGAAATAGAAAACT
ATACGAC
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