CX291891
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: PR1C_HORVU (Pathogenesis-related protein 1C OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.822e-17 Identity = 54/164 (32.93%), Postives = 70/164 (42.68%), Query Frame = 2 Query: 17 GTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 508 GT+A RIWART C F+ G G C+TGDC G L C G P TLAE+ + + DF D+S IDGFN+ M+FS C+ D C +C P P Y +P D +T C +Y++ FCP Sbjct: 59 GTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCSLSGRPPATLAEFTIGGGSTQDFYDISVIDGFNLAMDFS-----------CSTG------------------------DALQCRDPSCPP-----------PQAYQHPND--VATHACSGNNNYQITFCP 173
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: PR1A_HORVU (Pathogenesis-related protein 1A/1B OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.822e-17 Identity = 54/164 (32.93%), Postives = 70/164 (42.68%), Query Frame = 2 Query: 17 GTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 508 GT+A RIWART C F+ G G C+TGDC G L C G P TLAE+ + + DF D+S IDGFN+ M+FS C+ D C +C P P Y +P D +T C +Y++ FCP Sbjct: 59 GTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCSLSGQPPATLAEFTIGGGSTQDFYDISVIDGFNLAMDFS-----------CSTG------------------------DALQCRDPSCPP-----------PQAYQHPND--VATHACSGNNNYQITFCP 173
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: RST1_AVESA (Thaumatin-like pathogenesis-related protein 1 OS=Avena sativa GN=RASTL-1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.739e-15 Identity = 53/164 (32.32%), Postives = 70/164 (42.68%), Query Frame = 2 Query: 17 GTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 508 GT A RIW RT C F+ +G+G C TGDC G L C G P TLAEY + DF D+S IDGFN+ M+FS C+ + +C + CPD Y +P D +T C ++Y++ FCP Sbjct: 60 GTSAGRIWGRTGCSFN-NGRGSCATGDCAGALSCTLSG-QPATLAEYTIG--GSQDFYDISVIDGFNLAMDFS-----------CSTGVALKCRDA-------------------------------------NCPDAYHHPND--VATHACNGNSNYQITFCP 169
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: RST3_AVESA (Thaumatin-like pathogenesis-related protein 3 OS=Avena sativa GN=RASTL-3 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.102e-15 Identity = 56/164 (34.15%), Postives = 73/164 (44.51%), Query Frame = 2 Query: 17 GTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 508 GT A RIW RT C F+ +G+G C TGDC G L C G P TLAEY + DF D+S IDG+N+ M+FS C+ + LK C +SG CPD Y +P D +T C ++Y++ FCP Sbjct: 60 GTSAGRIWGRTGCSFN-NGRGSCATGDCAGALSCTLSG-QPATLAEYTIG--GSQDFYDISVIDGYNLAMDFS-----------CSTGV------ALK-----------------CRDSG--------------CPDAYHHPND--VATHACNGNSNYQITFCP 169
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: RST2_AVESA (Thaumatin-like pathogenesis-related protein 2 OS=Avena sativa GN=RASTL-2 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.102e-15 Identity = 52/164 (31.71%), Postives = 70/164 (42.68%), Query Frame = 2 Query: 17 GTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 508 GT A RIW RT C F+ +G+G C TGDC G L C G P TLAEY + DF D+S IDG+N+ M+FS C+ + +C + CPD Y +P D +T C ++Y++ FCP Sbjct: 60 GTSAGRIWGRTGCSFN-NGRGSCATGDCAGALSCTLSG-QPATLAEYTIG--GSQDFYDISVIDGYNLAMDFS-----------CSTGVALKCRDA-------------------------------------NCPDAYHHPND--VATHACNGNSNYQITFCP 169
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: RST4_AVESA (Thaumatin-like pathogenesis-related protein 4 OS=Avena sativa GN=RASTL-4 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.662e-12 Identity = 49/164 (29.88%), Postives = 69/164 (42.07%), Query Frame = 2 Query: 17 GTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 508 GT + RIW RT C F+ G G C+TGDC G L C G P TLAE+++ + D+ D+S ID +N+ M+FS C+ +C + CPD Y P D T +C T ++Y++ FCP Sbjct: 60 GTNSGRIWGRTGCSFNG-GSGSCQTGDCAGALSCTLSG-QPATLAEFSIG--GEHDYYDISVIDVYNLAMDFS-----------CSTGDALQCRD-------------------------------------SSCPDAYHQPDD--PKTHSCNTNSNYQITFCP 169
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: PRR3_JUNVI (Pathogenesis-related protein (Fragment) OS=Juniperus virginiana PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 4.093e-11 Identity = 30/47 (63.83%), Postives = 32/47 (68.09%), Query Frame = 2 Query: 17 GTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEY 157 GT +AR W RT C FDASGKG C+TGDC L C GA P TLAEY Sbjct: 57 GTASARFWGRTGCTFDASGKGSCQTGDCGRQLSCTVSGAVPATLAEY 103 The following BLAST results are available for this feature:
BLAST of CX291891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX291891 ID=CX291891; Name=CX291891; organism=Citrus clementina; type=EST; length=557bpback to top |