CX291899

Overview
NameCX291899
Unique NameCX291899
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length538
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291899 vs. ExPASy Swiss-Prot
Match: CBPY_PICPG (Carboxypeptidase Y OS=Pichia pastoris (strain GS115) GN=PRC1 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 5.806e-28
Identity = 63/165 (38.18%), Postives = 94/165 (56.97%), Query Frame = 3
Query:    6 NYYDIRKKCVG-SLCY-DFSNMEKFLNDKSVREAIGVGDIEFVSCSPTVYQAMLV--DWMRNLEVGIPGLLEDGVKLLVYAGEYDLICNWLGNSRWVHAMEWSGQKDFVASPEIPFEVDGSEAGVLKTNGPLSFLKVHDSGHMVPMDQPKAALAMLRRWMEGSLS 488
            N YDIRK+C G SLCY D   ++ +LN K V++A+G     + SC+  + +  L   DWM+     +  LL  G+ +L+YAG+ D ICNWLGN  W   + W     F  +    + V+G +AG  K     ++L+V+D+GHM P DQP+ +  M+ RW+ G  S
Sbjct:  357 NVYDIRKECDGGSLCYKDLEFIDTYLNQKFVQDALGAEVDTYESCNFEINRNFLFAGDWMKPYHEHVSSLLNKGLPVLIYAGDKDFICNWLGNRAWTDVLPWVDADGFEKAEVQDWLVNGRKAGEFKNYSNFTYLRVYDAGHMAPYDQPENSHEMVNRWISGDFS 521          
BLAST of CX291899 vs. ExPASy Swiss-Prot
Match: CBPY_YEAST (Carboxypeptidase Y OS=Saccharomyces cerevisiae GN=PRC1 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.522e-25
Identity = 61/168 (36.31%), Postives = 93/168 (55.36%), Query Frame = 3
Query:    6 NYYDIRKKCVG-SLCYD-FSNMEKFLNDKSVREAIGVGDIEFVSCSPTVYQAMLV--DWMRNLEVGIPGLLEDGVKLLVYAGEYDLICNWLGNSRWVHAMEWSGQKDFVASPEI---PFEVDGSEAGVLKTNGPLSFLKVHDSGHMVPMDQPKAALAMLRRWMEGSLS 488
            N YDIRK C G +LCY    +++ +LN   V+EA+G     + SC+  + +  L   DWM+     +  LL   + +LVYAG+ D ICNWLGN  W   + W   ++F AS ++      +    AG +K+    ++L+V + GHMVP D P+ AL+M+  W+ G  S
Sbjct:  365 NVYDIRKDCEGGNLCYPTLQDIDDYLNQDYVKEAVGAEVDHYESCNFDINRNFLFAGDWMKPYHTAVTDLLNQDLPILVYAGDKDFICNWLGNKAWTDVLPWKYDEEF-ASQKVRNWTASITDEVAGEVKSYKHFTYLRVFNGGHMVPFDVPENALSMVNEWIHGGFS 531          
BLAST of CX291899 vs. ExPASy Swiss-Prot
Match: YBY9_YEAST (Putative serine carboxypeptidase YBR139W OS=Saccharomyces cerevisiae GN=YBR139W PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.133e-23
Identity = 57/168 (33.93%), Postives = 91/168 (54.17%), Query Frame = 3
Query:    6 NYYDIRKKC----VGSLCYD-FSNMEKFLNDKSVREAIGVGDIEFVSCSPTVYQAMLV--DWMRNLEVGIPGLLEDGVKLLVYAGEYDLICNWLGNSRWVHAMEWSGQKDFVASPEIPF--EVDGSEAGVLKTNGPLSFLKVHDSGHMVPMDQPKAALAMLRRWMEGS 482
            N YDIR  C       +CY     +++++N   V+E +G     +  C   V+   L   D  +  +  I  LL   + +L+YAG+ D ICNWLGN  W + +EW  ++ +      P+  +  G E G +K  GP +FL+++D+GHMVP DQP+A+L M+  W+ G+
Sbjct:  328 NVYDIRGPCEDNSTDGMCYTGLRYVDQYMNFPEVQETLGSDVHNYSGCDNDVFTGFLFTGDGSKPFQQYIAELLNHNIPVLIYAGDKDYICNWLGNHAWSNELEWINKRRYQRRMLRPWVSKETGEELGQVKNYGPFTFLRIYDAGHMVPYDQPEASLEMVNSWISGN 495          
BLAST of CX291899 vs. ExPASy Swiss-Prot
Match: SCPL1_DICDI (Serine carboxypeptidase S10 family member 1 OS=Dictyostelium discoideum GN=DDB_G0291912 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.445e-18
Identity = 54/161 (33.54%), Postives = 90/161 (55.90%), Query Frame = 3
Query:    6 NYYDIRKKCVGS--LCYDFSNMEKFLNDKSVREAIGV-GDIEFVSCSPTVYQAMLVDWMRNLEVGIPGLLEDGVKLLVYAGEYDLICNWLGNSRWVHAMEWSGQKDFVASPEIPFEVDGSE-AGVLKTNGPLSFLKVHDSGHMVPMDQPKAALAMLRRWME 476
            N YD+ K C  +  LCY+F+ +  +LN  S +++ GV  +  +  CS   Y A++ DW       IP LLE+  K+LVY G YD ICN+LG++ W   ++W   ++F  SP     ++G+  +G  ++   L+   +  + HM P + P AALAM+  +++
Sbjct:  256 NVYDVSKTCYPNEPLCYNFTAIIDYLNLASTKQSFGVLPNSTWNVCSTQPYSAIIRDWFNTPINYIPTLLEN-YKVLVYNGNYDWICNFLGSTEWTSQLKWKYNQEFNNSPRKILYINGNTISGYSQSYDNLTMQVLLGASHMAPREAPVAALAMVESFIQ 415          
BLAST of CX291899 vs. ExPASy Swiss-Prot
Match: CPS1_PENJA (Carboxypeptidase S1 OS=Penicillium janthinellum PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.937e-15
Identity = 53/154 (34.42%), Postives = 78/154 (50.65%), Query Frame = 3
Query:   12 YDIRKKCVGSLCYDFSNMEKFLNDKSVREAIGVGDIEFVSCSPTVYQ--AMLVDWMRNLEVGIPGLLEDGVKLLVYAGEYDLICNWLGNSRWVHAMEWSGQKDFVASPEIPFEVDGSEAGVLKTNGPLSFLKVHDSGHMVPMDQPKAALAMLRR 467
            YDIR+       Y       +L+D +V +AIG     +  C    Y   A   D  R+    +  +++ G+ +LV+AG+ D ICNWLGN    +A+++ G   F A    P+ V+G E G  KT    SFLKV+ +GH VP  QP  AL   ++
Sbjct:  263 YDIREPSNDP--YPPKTYSTYLSDPTVVKAIGART-NYQECPNGPYNKFASTGDNPRSFLSTLSSVVQSGINVLVWAGDADWICNWLGNYEVANAVDFPGNAQFSALDLAPYTVNGVEKGQFKTVDNFSFLKVYGAGHEVPYYQPDTALQAFKQ 413          
BLAST of CX291899 vs. ExPASy Swiss-Prot
Match: CPVL_DICDI (Probable serine carboxypeptidase CPVL OS=Dictyostelium discoideum GN=cpvl PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.040e-13
Identity = 49/159 (30.82%), Postives = 85/159 (53.46%), Query Frame = 3
Query:    6 NYYDIRKKCVGSLCYDFSNMEKFLNDKSVREAIGVGDIEFVSCSPTVYQAMLVDWMRNLEVGIPGLLEDGVKLLVYAGEYDLICNWLGNSRWVHAMEWSGQKDFVASPEIPFEVDGSE---AGVLKTNGPLSFLKVHDSGHMVPMDQPKAALAMLRRWM 473
            +YYDIRK    +   DF+    FLN  S+R  I VG+  F + +  VY  +  D  ++++   P +L D +K+++Y G++D I         +  +EW G + F+ SP+I +++       AG ++     + + V  +GHMVP+DQP  A  M+ R++
Sbjct:  339 DYYDIRKTVEPTYGGDFT---AFLNQSSIRAMIHVGNNYFQN-NNDVYIHLEQDIPKSVKQLFPTIL-DNIKVILYNGQFDFIVGPSLTETMIRTIEWEGIQPFLESPKIIWKIPSDNVDVAGFVRQWNSFTQVVVRQAGHMVPLDQPARAFDMIDRFI 492          
BLAST of CX291899 vs. ExPASy Swiss-Prot
Match: SCP51_ARATH (Serine carboxypeptidase-like 51 OS=Arabidopsis thaliana GN=SCPL51 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 2.217e-11
Identity = 38/118 (32.20%), Postives = 61/118 (51.69%), Query Frame = 3
Query:  114 DIEFVSCSPTVYQAMLVDWMRNLEVGIPGLLEDGVKLLVYAGEYDLICNWLGNSRWVHAMEWSGQKDFVASPEIPF--EVDGSEAGVLKTNGPLSFLKVHDSGHMVPMDQPKAALAML 461
            D+ + + S  V+ AM   +M+ +   +  LL  GV + +Y G+ D+IC+  G   WVH + W G ++F      P   E D +  G  K+   L F  +  +GH VP+D+P  AL M+
Sbjct:  335 DLIWGNNSDDVFTAMEAAFMKPVIEDVDELLATGVDVTIYNGQLDVICSTSGTEAWVHKLRWEGLEEFKKMEREPLFCESDRATRGFTKSYKNLHFYWILGAGHFVPVDEPCVALKMV 452          
The following BLAST results are available for this feature:
BLAST of CX291899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
CBPY_PICPG5.806e-2838.18Carboxypeptidase Y OS=Pichia pastoris (strain GS11... [more]
CBPY_YEAST3.522e-2536.31Carboxypeptidase Y OS=Saccharomyces cerevisiae GN=... [more]
YBY9_YEAST1.133e-2333.93Putative serine carboxypeptidase YBR139W OS=Saccha... [more]
SCPL1_DICDI2.445e-1833.54Serine carboxypeptidase S10 family member 1 OS=Dic... [more]
CPS1_PENJA1.937e-1534.42Carboxypeptidase S1 OS=Penicillium janthinellum PE... [more]
CPVL_DICDI4.040e-1330.82Probable serine carboxypeptidase CPVL OS=Dictyoste... [more]
SCP51_ARATH2.217e-1132.20Serine carboxypeptidase-like 51 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC04006G04SK FlavFr1 Citrus clementina cDNA clone C04006G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291899 ID=CX291899; Name=CX291899; organism=Citrus clementina; type=EST; length=538bp
GAGGAAATTACTATGACATTAGAAAGAAGTGTGTTGGGAGCCTCTGCTAT
GACTTCTCGAACATGGAGAAATTCCTCAATGATAAATCTGTCAGGGAAGC
TATTGGTGTTGGGGACATAGAGTTTGTGTCTTGCAGCCCTACAGTGTATC
AGGCTATGCTTGTAGACTGGATGAGGAACCTTGAAGTTGGAATTCCGGGA
CTTCTCGAGGATGGAGTCAAGTTGCTTGTATATGCCGGAGAATACGATCT
CATTTGCAACTGGCTTGGTAATTCGAGATGGGTTCATGCAATGGAATGGT
CTGGTCAGAAAGACTTTGTAGCATCTCCTGAGATTCCTTTCGAAGTTGAT
GGTTCAGAAGCTGGTGTGCTGAAAACTAACGGACCTCTCAGTTTCCTCAA
GGTTCATGACTCTGGTCATATGGTTCCCATGGACCAGCCTAAAGCTGCAT
TAGCGATGCTGAGGAGGTGGATGGAGGGCTCACTTTCTGAAGTTCCAGCT
GGTTCAGGAAAATTGGTGGCTGAGATGTGATCACTTCA
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