CX291904

Overview
NameCX291904
Unique NameCX291904
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length552
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: ADH6_YEAST (NADP-dependent alcohol dehydrogenase 6 OS=Saccharomyces cerevisiae GN=ADH6 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 9.438e-29
Identity = 71/169 (42.01%), Postives = 95/169 (56.21%), Query Frame = 3
Query:    9 EIVGVVTEVGSKV-SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE 512
            EIVG V ++G K  S  KVG +VGVG  V SC  CD C  D E YC K + TY+  Y DG ++ GGY++ +   EHFVV IPE  P    APLLC G+TVYSPL   G   PG                  +KAMG +  VIS S  K+ +A+ ++GAD ++ + ++ +
Sbjct:   69 EIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVRNGCG-PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMGADHYIATLEEGD 235          
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: ADH7_YEAST (NADP-dependent alcohol dehydrogenase 7 OS=Saccharomyces cerevisiae GN=ADH7 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.194e-23
Identity = 64/163 (39.26%), Postives = 89/163 (54.60%), Query Frame = 3
Query:    9 EIVGVVTEVGSKV-SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV-IMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL 491
            EI+G V +VGSK  +  K+GD+VGVG    +C  C+ C  D E YC    ++T  + Y DG I+ GG++  +   EHF ++IPE  P    APLLC GITV+SPL   G   PG                  AKAMG +V   S   SK+ +++ +LGAD ++
Sbjct:   69 EIIGRVVKVGSKCHTGVKIGDRVGVGAQALACFECERCKSDNEQYCTNDHVLTMWTPYKDGYISQGGFASHVRLHEHFAIQIPENIPSPLAAPLLCGGITVFSPLLRNGCG-PGKRVGIVGIGGIGHMGILLAKAMGAEVYAFSRGHSKREDSM-KLGADHYI 229          
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: YL498_MIMIV (Probable zinc-type alcohol dehydrogenase-like protein L498 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L498 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.474e-23
Identity = 63/188 (33.51%), Postives = 94/188 (50.00%), Query Frame = 3
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPK-VIMTYASKYH-------DGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGII 548
            E++G V ++G  V K+ +GD V V  ++ SC  C  C   +E +C       Y  K          G ITYGGYS+ ++  +HFV + P+   ++  APL+CAG T YSPLR   +  PGM               K AKAMG  V  I+ +  K  ++V  LGA+  ++S +  +M    G+ D I+
Sbjct:  130 ELIGRVIDIGPNVDKYSIGDIVCVSPVIDSCGHCKMCTHHIEQHCMNGATEIYNQKTRLPGDIKPSGPITYGGYSNIVIIKQHFVYKFPKNLDIERCAPLMCAGATTYSPLRQAKVG-PGMKVGIVGIGGLGHIAVKIAKAMGAHVVAITRTEWKFKDSVNNLGANESILSTNVWQMNQHKGSFDFIL 316          
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: ADH1_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adhT PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 3.365e-18
Identity = 56/179 (31.28%), Postives = 85/179 (47.49%), Query Frame = 3
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGI 545
            E VGV+ EVG  V+  KVGD+VG+  +  +C  CD C    E  C +       + + G    GGY++   A   +VV+IP+    +  AP+ CAG+T Y  L+  G  KPG                ++AKAMG+ V  +     +K E  ++LGAD  +  +  D  Q     + G+
Sbjct:   62 EGVGVIEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCER-------QQNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGA-KPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDLG-DEKLELAKQLGADLVVNPKHDDAAQWIKEKVGGV 231          
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: ADH2_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adh PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.739e-18
Identity = 55/179 (30.73%), Postives = 85/179 (47.49%), Query Frame = 3
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGI 545
            E VG+V EV   V   KVGD+VG+  +  +C  C+ C    E  CP        + + G    GGY++   A   +V +IP+       AP+LCAG+T Y  L+  G  +PG                ++AKAMG+ V  +  S  +KS+  + LGAD  +    +D ++A    + G+
Sbjct:   62 EGVGIVVEVAKGVKSIKVGDRVGIPWLYSACGECEYCLTGQETLCP-------HQLNGGYSVDGGYAEYCKAPADYVAKIPDNLDPVEVAPILCAGVTTYKALKVSGA-RPGEWVAIYGIGGLGHIALQYAKAMGLNVVAVDIS-DEKSKLAKDLGADIAINGLKEDPVKAIHDQVGGV 231          
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: ADH3_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 4.858e-17
Identity = 53/158 (33.54%), Postives = 76/158 (48.10%), Query Frame = 3
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGAD 482
            E VG+V EVG  V+  KVGD+VG+  +  +C  CD C    E  C         + + G    GGY++   A   +VV+IP+    +  AP+ CAG+T Y  L+  G  KPG                ++AKAMG+ V  +     +K E  + LGAD
Sbjct:   62 EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLC-------EHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGA-KPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIG-DEKLELAKELGAD 210          
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: ADH_SCHPO (Alcohol dehydrogenase OS=Schizosaccharomyces pombe GN=adh1 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 6.345e-17
Identity = 55/179 (30.73%), Postives = 86/179 (48.04%), Query Frame = 3
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL-VSRDQDEMQAAMGTMDG 542
            E  GVV +VG+ V++ K+GD+VGV  M  SC +C+ C    E  CP + ++       G    G +    +A+      IPE  PL+  AP++CAGIT Y  L+   +                    ++AKAM ++V  I T    K+E V+  GA+ FL   ++ D ++A     +G
Sbjct:   70 EGAGVVVKVGAGVTRLKIGDRVGVKWMNSSCGNCEYCMKAEETICPHIQLS-------GYTVDGTFQHYCIANATHATIIPESVPLEVAAPIMCAGITCYRALKESKVGPGEWICIPGAGGGLGHLAVQYAKAMAMRVVAIDTG-DDKAELVKSFGAEVFLDFKKEADMIEAVKAATNG 240          
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: YJGB_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yjgB OS=Escherichia coli (strain K12) GN=yjgB PE=3 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.082e-16
Identity = 56/184 (30.43%), Postives = 91/184 (49.46%), Query Frame = 3
Query:    9 EIVGVVTEVGSKVSK--FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPK-VIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIID 551
            E++G V  +GS       +VG +VG+G    SC  CD+C    +  C +  + T  ++        GG+++ + AD  +V+ +PE   +++  PLLC GITV+ PL  + +                    K   AMG +VT  S++P+K+ E V  +GAD  + SRD   ++A  G  D II+
Sbjct:   64 EVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMNR--------GGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHITATS-RVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQE-VLAMGADKVVNSRDPQALKALAGQFDLIIN 237          
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: ADH2_KLULA (Alcohol dehydrogenase 2 OS=Kluyveromyces lactis GN=ADH2 PE=3 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 3.149e-16
Identity = 58/186 (31.18%), Postives = 90/186 (48.39%), Query Frame = 3
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL---VSRD--QDEMQAAMGTMDGIID 551
            E  GVV  +G  V  + +GD  G+  + GSC SC+ C +  E+ CP   +  +   HDG+     +     AD     RIP+G  L   AP+LCAG+TVY  L+   L                    ++AKAMG +V  I T  ++K++  + LG + F+   VS+D  ++ + A  G   G+I+
Sbjct:   68 EGAGVVVAMGENVKGWNIGDFAGIKWLNGSCMSCEYCELSNESNCPDADL--SGYTHDGS-----FQQYATADAVQAARIPKGTDLAEVAPILCAGVTVYKALKSADLKAGDWVAISGACGGLGSLAIQYAKAMGYRVLGIDTG-AEKAKLFKELGGEYFVDYAVSKDLIKEIVDATNGGAHGVIN 245          
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: ADH2_YEAST (Alcohol dehydrogenase 2 OS=Saccharomyces cerevisiae GN=ADH2 PE=1 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 7.015e-16
Identity = 55/179 (30.73%), Postives = 85/179 (47.49%), Query Frame = 3
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL-VSRDQDEMQAAMGTMDG 542
            E  GVV  +G  V  +K+GD  G+  + GSC +C+ C +  E+ CP   +  +   HDG+     + +   AD      IP+G  L   AP+LCAGITVY  L+   L                    ++AKAMG +V  I   P K+ E    LG + F+  ++++D + A +   +G
Sbjct:   68 EGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADL--SGYTHDGS-----FQEYATADAVQAAHIPQGTDLAEVAPILCAGITVYKALKSANLRAGHWAAISGAAGGLGSLAVQYAKAMGYRVLGIDGGPGKE-ELFTSLGGEVFIDFTKEKDIVSAVVKATNG 238          
The following BLAST results are available for this feature:
BLAST of CX291904 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
ADH6_YEAST9.438e-2942.01NADP-dependent alcohol dehydrogenase 6 OS=Saccharo... [more]
ADH7_YEAST1.194e-2339.26NADP-dependent alcohol dehydrogenase 7 OS=Saccharo... [more]
YL498_MIMIV3.474e-2333.51Probable zinc-type alcohol dehydrogenase-like prot... [more]
ADH1_BACST3.365e-1831.28Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH2_BACST5.739e-1830.73Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH3_BACST4.858e-1733.54Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH_SCHPO6.345e-1730.73Alcohol dehydrogenase OS=Schizosaccharomyces pombe... [more]
YJGB_ECOLI1.082e-1630.43Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
ADH2_KLULA3.149e-1631.18Alcohol dehydrogenase 2 OS=Kluyveromyces lactis GN... [more]
ADH2_YEAST7.015e-1630.73Alcohol dehydrogenase 2 OS=Saccharomyces cerevisia... [more]

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Properties
Property NameValue
Genbank descriptionC04006G09SK FlavFr1 Citrus clementina cDNA clone C04006G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291904 ID=CX291904; Name=CX291904; organism=Citrus clementina; type=EST; length=552bp
GCACGAGGGAGATTGTGGGCGTAGTGACAGAGGTCGGAAGCAAAGTGAGT
AAATTCAAAGTCGGAGACAAAGTGGGAGTAGGATGCATGGTGGGATCATG
CCGCTCTTGTGATAGCTGCGCCATTGATCTTGAGAACTACTGCCCCAAAG
TTATAATGACCTATGCCAGCAAGTACCATGATGGAACCATCACATACGGA
GGCTACTCTGACACTATGGTTGCCGATGAGCACTTTGTGGTCCGTATTCC
TGAAGGCGCACCACTTGACGCCACTGCCCCTCTCCTCTGTGCTGGTATCA
CAGTCTACAGTCCGTTGAGATTCTATGGACTCGACAAGCCTGGTATGCAT
GTGGGTGTTGTCGGCTTGGGCGGTCTAGGCCATGTCGCTGTCAAATTCGC
AAAGGCTATGGGGGTTAAGGTGACTGTGATCAGTACCTCCCCTAGCAAGA
AGAGTGAAGCCGTTGAACGTCTTGGCGCTGATTCCTTTTTGGTCAGTCGT
GATCAAGATGAGATGCAGGCTGCCATGGGCACAATGGATGGTATCATCGA
TA
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