CX291904

Overview
NameCX291904
Unique NameCX291904
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length552
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: ADH2_CANAL (Alcohol dehydrogenase 2 OS=Candida albicans GN=ADH2 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 9.162e-16
Identity = 57/179 (31.84%), Postives = 85/179 (47.49%), Query Frame = 3
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL-VSRDQDEMQAAMGTMDG 542
            E  GVV  +G  V  +KVGD  GV  + GSC +C+ C    E  C +  +  +   HDG+     +     AD     RIP G  L   AP+LCAG+TVY  L+   L+                   ++AKAMG +V  I      K E V+ LGA++F+  ++++D ++A     +G
Sbjct:   68 EGAGVVVALGENVKGWKVGDYAGVKWLNGSCLNCEYCQSGAEPNCAEADL--SGYTHDGS-----FQQYATADAVQAARIPAGTDLANVAPILCAGVTVYKALKTAELEAGQWVAISGAAGGLGSLAVQYAKAMGYRVLAID-GGEDKGEFVKSLGAETFIDFTKEKDVVEAVKKATNG 238          
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: ADH3_KLULA (Alcohol dehydrogenase 3, mitochondrial OS=Kluyveromyces lactis GN=ADH3 PE=3 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.563e-15
Identity = 51/161 (31.68%), Postives = 77/161 (47.83%), Query Frame = 3
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL 491
            E  GVV  +G  V  + +GD  G+  + GSC SC+ C +  E+ CP   +  +   HDG+     +     AD     RIP+G  L   AP+LCAG+TVY  L+   L                    ++AKAMG +V  I     +K + V++LG ++F+
Sbjct:   94 EGAGVVVAMGENVKGWNIGDFAGIKWLNGSCMSCEYCELSNESNCPDADL--SGYTHDGS-----FQQYATADAVQAARIPKGTDLAEVAPILCAGVTVYKALKSANLKAGDWVAISGAAGGLGSLAVQYAKAMGYRVVGID-GGEEKGKLVKQLGGEAFV 246          
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: ADH2_PICST (Alcohol dehydrogenase 2 OS=Pichia stipitis GN=ADH2 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.563e-15
Identity = 60/186 (32.26%), Postives = 89/186 (47.85%), Query Frame = 3
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGAD---SFLVSRD--QDEMQAAMGTMDGIID 551
            E  GVV  +G  V+ +++GD  G+  + GSC  C+ C    E+ CP   ++  +  HDG+      +D + A      RIP+G  L   AP+LCAGITVY  L+   L                    ++AKAMG +V  I    + K E  + LGA+    FL S+D   D ++A  G   G+I+
Sbjct:   68 EGAGVVVALGENVTGWEIGDYAGIKWINGSCLQCEYCVTAHESNCPDADLSGYT--HDGSFQQYATADAIQA-----ARIPKGTDLALIAPILCAGITVYKALKTAQLQAGQWVAVSGAAGGLGSLAIQYAKAMGYRVVGID-GGADKGEFAKSLGAEVFVDFLSSKDVVADVLKATNGGAHGVIN 245          
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: ADH1_CANAL (Alcohol dehydrogenase 1 OS=Candida albicans GN=ADH1 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.563e-15
Identity = 55/179 (30.73%), Postives = 86/179 (48.04%), Query Frame = 3
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL-VSRDQDEMQAAMGTMDG 542
            E  GVV  +G  V  +K+GD  G+  + GSC SC+ C    E  C +  +  +   HDG+     +     AD     +IP G  L   AP+LCAG+TVY  L+   L                    ++A+AMG++V  I     +K E V+ LGA++++  ++D+D ++A     DG
Sbjct:   70 EGAGVVVGMGENVKGWKIGDFAGIKWLNGSCMSCEFCQQGAEPNCGEADL--SGYTHDGS-----FEQYATADAVQAAKIPAGTDLANVAPILCAGVTVYKALKTADLAAGQWVAISGAGGGLGSLAVQYARAMGLRVVAID-GGDEKGEFVKSLGAEAYVDFTKDKDIVEAVKKATDG 240          
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: ADH3_EMENI (Alcohol dehydrogenase 3 OS=Emericella nidulans GN=alcC PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.041e-15
Identity = 53/163 (32.52%), Postives = 75/163 (46.01%), Query Frame = 3
Query:    9 EIVGVVTEVGSKVSK--FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL 491
            E  GVV   G  V    FK+GD+ G+  + GSC SC+ C    E  CP   ++       G    G +    +       +IP+  PLDA AP+LCAGITVY  L+  G                     ++AKAMG++   I +   KK+   E+LGA+ F+
Sbjct:   68 EGAGVVVAKGELVKDEDFKIGDRAGIKWLNGSCLSCEMCMQADEPLCPHASLS-------GYTVDGTFQQYTIGKAALASKIPDNVPLDAAAPILCAGITVYKGLKESGARPGQTVAIVGAGGGLGSLAQQYAKAMGLRTIAIDSGDEKKA-MCEQLGAEVFI 222          
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: ADHA_RHIME (Alcohol dehydrogenase OS=Rhizobium meliloti GN=adhA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.666e-15
Identity = 58/183 (31.69%), Postives = 88/183 (48.09%), Query Frame = 3
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQD---EMQAAMGTMDGII 548
            E VG V ++G++V++ K GD+VGV  +  +C  C  C    E  C        S+ + G    G ++   +AD  FV R+P        AP+LCAG+TVY  L+   + +PG                ++AKAMG+ V      P K + A E+LGAD  + +R  D   E+Q   G + G +
Sbjct:   64 EGVGYVAKLGAEVTRLKEGDRVGVPWLHTACGCCTPCRTGWETLC-------GSQQNTGYSVDGTFAQYGLADPDFVGRLPARLEFGPAAPVLCAGVTVYKGLKETEV-RPGEWVLVSGIGGLGHMAVQYAKAMGMHVAAADIFPDKLALA-EKLGADLVVDARAPDAVEEVQRRTGGLHGAL 237          
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: ADH1_ASPFN (Alcohol dehydrogenase 1 OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=adh1 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 2.666e-15
Identity = 49/161 (30.43%), Postives = 78/161 (48.45%), Query Frame = 3
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL 491
            E  GVV   G  V++F++GD  G+  + GSC +C+ C    E  CP   ++       G    G +    +       ++P+  PLDA AP+LCAGITVY  L+  G+                    ++AKAMG++V  I     K++   E+LGA++++
Sbjct:   68 EGAGVVVARGDLVTEFEIGDHAGLKWLNGSCLACEFCKQADEPLCPNASLS-------GYTVDGTFQQYAIGKATHASKLPKNVPLDAVAPVLCAGITVYKGLKESGVRPGQTVAIVGAGGGLGSLALQYAKAMGIRVVAIDGGEEKQA-MCEQLGAEAYV 220          
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: ADH1_YEAST (Alcohol dehydrogenase 1 OS=Saccharomyces cerevisiae GN=ADH1 PE=1 SV=4)

HSP 1 Score: 80.4925 bits (197), Expect = 5.939e-15
Identity = 54/179 (30.17%), Postives = 83/179 (46.37%), Query Frame = 3
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL-VSRDQDEMQAAMGTMDG 542
            E  GVV  +G  V  +K+GD  G+  + GSC +C+ C +  E+ CP   +  +   HDG+     +     AD      IP+G  L   AP+LCAGITVY  L+   L                    ++AKAMG +V  I     K+ E    +G + F+  ++++D + A +   DG
Sbjct:   68 EGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADL--SGYTHDGS-----FQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKE-ELFRSIGGEVFIDFTKEKDIVGAVLKATDG 238          
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: ADH1_PICST (Alcohol dehydrogenase 1 OS=Pichia stipitis GN=ADH1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.939e-15
Identity = 55/168 (32.74%), Postives = 83/168 (49.40%), Query Frame = 3
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRD 503
            E  GVV  +GS V+ +++GD  G+  + GSC +C+ C    E  C K  ++  +  HDG+      +D + A      R+P+G  L   AP+LCAGITVY  L+   +                    ++AKAMG +V  I     +K E V+ LGA++   F VS+D
Sbjct:   68 EGAGVVVGIGSNVTGWELGDYAGIKWLNGSCLNCEFCQHSDEPNCAKADLSGYT--HDGSFQQYATADAVQA-----ARLPKGTDLAQAAPILCAGITVYKALKTAQIQPGNWVCISGAGGGLGSLAIQYAKAMGFRVIAID-GGEEKGEFVKSLGAEAYVDFTVSKD 227          
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: ADH1_KLULA (Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN=ADH1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.939e-15
Identity = 54/186 (29.03%), Postives = 87/186 (46.77%), Query Frame = 3
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL-----VSRDQDEMQAAMGTMDGIID 551
            E  GVV  +G  V  +K+GD  G+  + GSC SC+ C +  E+ CP+  +  +   HDG+     +     AD     +IP G  L   AP+LCAG+TVY  L+   L                    ++AKAMG +V  I     +K++  + LG + F+      +  ++ ++A  G   G+I+
Sbjct:   70 EGAGVVVAMGENVKGWKIGDFAGIKWLNGSCMSCEYCELSNESNCPEADL--SGYTHDGS-----FQQYATADAVQAAKIPVGTDLAEVAPVLCAGVTVYKALKSANLKAGDWVAISGAAGGLGSLAVQYAKAMGYRVLGIDAG-EEKAKLFKDLGGEYFIDFTKSKNIPEEVIEATKGGAHGVIN 247          
The following BLAST results are available for this feature:
BLAST of CX291904 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
ADH2_CANAL9.162e-1631.84Alcohol dehydrogenase 2 OS=Candida albicans GN=ADH... [more]
ADH3_KLULA1.563e-1531.68Alcohol dehydrogenase 3, mitochondrial OS=Kluyvero... [more]
ADH2_PICST1.563e-1532.26Alcohol dehydrogenase 2 OS=Pichia stipitis GN=ADH2... [more]
ADH1_CANAL1.563e-1530.73Alcohol dehydrogenase 1 OS=Candida albicans GN=ADH... [more]
ADH3_EMENI2.041e-1532.52Alcohol dehydrogenase 3 OS=Emericella nidulans GN=... [more]
ADHA_RHIME2.666e-1531.69Alcohol dehydrogenase OS=Rhizobium meliloti GN=adh... [more]
ADH1_ASPFN2.666e-1530.43Alcohol dehydrogenase 1 OS=Aspergillus flavus (str... [more]
ADH1_YEAST5.939e-1530.17Alcohol dehydrogenase 1 OS=Saccharomyces cerevisia... [more]
ADH1_PICST5.939e-1532.74Alcohol dehydrogenase 1 OS=Pichia stipitis GN=ADH1... [more]
ADH1_KLULA5.939e-1529.03Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC04006G09SK FlavFr1 Citrus clementina cDNA clone C04006G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291904 ID=CX291904; Name=CX291904; organism=Citrus clementina; type=EST; length=552bp
GCACGAGGGAGATTGTGGGCGTAGTGACAGAGGTCGGAAGCAAAGTGAGT
AAATTCAAAGTCGGAGACAAAGTGGGAGTAGGATGCATGGTGGGATCATG
CCGCTCTTGTGATAGCTGCGCCATTGATCTTGAGAACTACTGCCCCAAAG
TTATAATGACCTATGCCAGCAAGTACCATGATGGAACCATCACATACGGA
GGCTACTCTGACACTATGGTTGCCGATGAGCACTTTGTGGTCCGTATTCC
TGAAGGCGCACCACTTGACGCCACTGCCCCTCTCCTCTGTGCTGGTATCA
CAGTCTACAGTCCGTTGAGATTCTATGGACTCGACAAGCCTGGTATGCAT
GTGGGTGTTGTCGGCTTGGGCGGTCTAGGCCATGTCGCTGTCAAATTCGC
AAAGGCTATGGGGGTTAAGGTGACTGTGATCAGTACCTCCCCTAGCAAGA
AGAGTGAAGCCGTTGAACGTCTTGGCGCTGATTCCTTTTTGGTCAGTCGT
GATCAAGATGAGATGCAGGCTGCCATGGGCACAATGGATGGTATCATCGA
TA
back to top