CX291904

Overview
NameCX291904
Unique NameCX291904
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length552
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: ADH_STAAW (Alcohol dehydrogenase OS=Staphylococcus aureus (strain MW2) GN=adh PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.260e-13
Identity = 49/178 (27.53%), Postives = 77/178 (43.26%), Query Frame = 3
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAK-AMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMD 539
            E +G V EV   V   K+GD+V +  M  SC  C+ C    E  C  V        + G    G  ++ ++    + V++PE     A + + CAG+T Y  ++   + KPG                ++AK  MG K+     +  K + A E LGAD+ + S+D D +   M   D
Sbjct:   59 EGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSV-------KNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNV-KPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKE-LGADAIINSKDVDPVAEVMKLTD 227          
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: ADH_STAAS (Alcohol dehydrogenase OS=Staphylococcus aureus (strain MSSA476) GN=adh PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.260e-13
Identity = 49/178 (27.53%), Postives = 77/178 (43.26%), Query Frame = 3
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAK-AMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMD 539
            E +G V EV   V   K+GD+V +  M  SC  C+ C    E  C  V        + G    G  ++ ++    + V++PE     A + + CAG+T Y  ++   + KPG                ++AK  MG K+     +  K + A E LGAD+ + S+D D +   M   D
Sbjct:   59 EGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSV-------KNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNV-KPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKE-LGADAIINSKDVDPVAEVMKLTD 227          
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: ADH_STAAR (Alcohol dehydrogenase OS=Staphylococcus aureus (strain MRSA252) GN=adh PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.260e-13
Identity = 49/178 (27.53%), Postives = 77/178 (43.26%), Query Frame = 3
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAK-AMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMD 539
            E +G V EV   V   K+GD+V +  M  SC  C+ C    E  C  V        + G    G  ++ ++    + V++PE     A + + CAG+T Y  ++   + KPG                ++AK  MG K+     +  K + A E LGAD+ + S+D D +   M   D
Sbjct:   59 EGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSV-------KNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNV-KPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKE-LGADAIINSKDVDPVAEVMKLTD 227          
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: ADH_STAAN (Alcohol dehydrogenase OS=Staphylococcus aureus (strain N315) GN=adh PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.260e-13
Identity = 49/178 (27.53%), Postives = 77/178 (43.26%), Query Frame = 3
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAK-AMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMD 539
            E +G V EV   V   K+GD+V +  M  SC  C+ C    E  C  V        + G    G  ++ ++    + V++PE     A + + CAG+T Y  ++   + KPG                ++AK  MG K+     +  K + A E LGAD+ + S+D D +   M   D
Sbjct:   59 EGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSV-------KNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNV-KPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKE-LGADAIINSKDVDPVAEVMKLTD 227          
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: ADH_STAAM (Alcohol dehydrogenase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=adh PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.260e-13
Identity = 49/178 (27.53%), Postives = 77/178 (43.26%), Query Frame = 3
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAK-AMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMD 539
            E +G V EV   V   K+GD+V +  M  SC  C+ C    E  C  V        + G    G  ++ ++    + V++PE     A + + CAG+T Y  ++   + KPG                ++AK  MG K+     +  K + A E LGAD+ + S+D D +   M   D
Sbjct:   59 EGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSV-------KNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNV-KPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKE-LGADAIINSKDVDPVAEVMKLTD 227          
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: ADH_STAAC (Alcohol dehydrogenase OS=Staphylococcus aureus (strain COL) GN=adh PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.260e-13
Identity = 49/178 (27.53%), Postives = 77/178 (43.26%), Query Frame = 3
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAK-AMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMD 539
            E +G V EV   V   K+GD+V +  M  SC  C+ C    E  C  V        + G    G  ++ ++    + V++PE     A + + CAG+T Y  ++   + KPG                ++AK  MG K+     +  K + A E LGAD+ + S+D D +   M   D
Sbjct:   59 EGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSV-------KNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNV-KPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKE-LGADAIINSKDVDPVAEVMKLTD 227          
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: ADH_STAAB (Alcohol dehydrogenase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=adh PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.260e-13
Identity = 49/178 (27.53%), Postives = 77/178 (43.26%), Query Frame = 3
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAK-AMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMD 539
            E +G V EV   V   K+GD+V +  M  SC  C+ C    E  C  V        + G    G  ++ ++    + V++PE     A + + CAG+T Y  ++   + KPG                ++AK  MG K+     +  K + A E LGAD+ + S+D D +   M   D
Sbjct:   59 EGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSV-------KNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNV-KPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKE-LGADAIINSKDVDPVAEVMKLTD 227          
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: ADH_STAA8 (Alcohol dehydrogenase OS=Staphylococcus aureus (strain NCTC 8325) GN=adh PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.260e-13
Identity = 49/178 (27.53%), Postives = 77/178 (43.26%), Query Frame = 3
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAK-AMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMD 539
            E +G V EV   V   K+GD+V +  M  SC  C+ C    E  C  V        + G    G  ++ ++    + V++PE     A + + CAG+T Y  ++   + KPG                ++AK  MG K+     +  K + A E LGAD+ + S+D D +   M   D
Sbjct:   59 EGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSV-------KNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNV-KPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKE-LGADAIINSKDVDPVAEVMKLTD 227          
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: ADH_STAA3 (Alcohol dehydrogenase OS=Staphylococcus aureus (strain USA300) GN=adh PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.260e-13
Identity = 49/178 (27.53%), Postives = 77/178 (43.26%), Query Frame = 3
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAK-AMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMD 539
            E +G V EV   V   K+GD+V +  M  SC  C+ C    E  C  V        + G    G  ++ ++    + V++PE     A + + CAG+T Y  ++   + KPG                ++AK  MG K+     +  K + A E LGAD+ + S+D D +   M   D
Sbjct:   59 EGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSV-------KNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNV-KPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKE-LGADAIINSKDVDPVAEVMKLTD 227          
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: ADH2_EMENI (Alcohol dehydrogenase 2 OS=Emericella nidulans GN=alcB PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 5.203e-11
Identity = 47/163 (28.83%), Postives = 72/163 (44.17%), Query Frame = 3
Query:    9 EIVGVVTEVGS--KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL 491
            E VG V ++G+  + S  K+GD+VGV  +  +C  C  C    +  C        ++   G  T G +   ++    +V  IP+G P    APLLCAG+TVY+ L+     +PG                    A G+ + VI      K E V+  GA+ F+
Sbjct:   75 EGVGKVVKLGAGAEASGLKIGDRVGVKWISSACGQCPPCQDGADGLC-------FNQKVSGYYTPGTFQQYVLGPAQYVTPIPDGLPSAEAAPLLCAGVTVYASLK-RSKAQPGQWIVISGAGGGLGHLAVQIAAKGMGLRVIGVDHGSKEELVKASGAEHFV 229          
The following BLAST results are available for this feature:
BLAST of CX291904 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
ADH_STAAW7.260e-1327.53Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAS7.260e-1327.53Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAR7.260e-1327.53Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAN7.260e-1327.53Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAM7.260e-1327.53Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAC7.260e-1327.53Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAB7.260e-1327.53Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAA87.260e-1327.53Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAA37.260e-1327.53Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH2_EMENI5.203e-1128.83Alcohol dehydrogenase 2 OS=Emericella nidulans GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC04006G09SK FlavFr1 Citrus clementina cDNA clone C04006G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291904 ID=CX291904; Name=CX291904; organism=Citrus clementina; type=EST; length=552bp
GCACGAGGGAGATTGTGGGCGTAGTGACAGAGGTCGGAAGCAAAGTGAGT
AAATTCAAAGTCGGAGACAAAGTGGGAGTAGGATGCATGGTGGGATCATG
CCGCTCTTGTGATAGCTGCGCCATTGATCTTGAGAACTACTGCCCCAAAG
TTATAATGACCTATGCCAGCAAGTACCATGATGGAACCATCACATACGGA
GGCTACTCTGACACTATGGTTGCCGATGAGCACTTTGTGGTCCGTATTCC
TGAAGGCGCACCACTTGACGCCACTGCCCCTCTCCTCTGTGCTGGTATCA
CAGTCTACAGTCCGTTGAGATTCTATGGACTCGACAAGCCTGGTATGCAT
GTGGGTGTTGTCGGCTTGGGCGGTCTAGGCCATGTCGCTGTCAAATTCGC
AAAGGCTATGGGGGTTAAGGTGACTGTGATCAGTACCTCCCCTAGCAAGA
AGAGTGAAGCCGTTGAACGTCTTGGCGCTGATTCCTTTTTGGTCAGTCGT
GATCAAGATGAGATGCAGGCTGCCATGGGCACAATGGATGGTATCATCGA
TA
back to top