CX291958

Overview
NameCX291958
Unique NameCX291958
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length273
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291958 vs. ExPASy Swiss-Prot
Match: HSP74_TRYBB (Heat shock 70 kDa protein 4 OS=Trypanosoma brucei brucei PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 3.471e-24
Identity = 47/88 (53.41%), Postives = 69/88 (78.41%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLD 268
            TG++N+I ITNDKGRLSK +IE+MV +A KY+AED+ H   ++AKN LENYA++M+NT+ D  +  KLD ADK  +  A+++A++WL+
Sbjct:  498 TGKRNQIVITNDKGRLSKADIERMVSDAAKYEAEDKAHVXXIDAKNGLENYAFSMKNTINDPNVAGKLDDADKNAVTTAVEEALRWLN 585          
BLAST of CX291958 vs. ExPASy Swiss-Prot
Match: HSP70_PLAFA (Heat shock 70 kDa protein OS=Plasmodium falciparum PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 3.471e-24
Identity = 48/89 (53.93%), Postives = 73/89 (82.02%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLD 268
            +TG++N ITITNDKGRLS+DEI++MV +AEKYKAEDEE++K++EA+N+LENY Y ++++++D+KI  KL PA+ +     I   ++WL+
Sbjct:  507 STGKQNHITITNDKGRLSQDEIDRMVNDAEKYKAEDEENRKRIEARNSLENYCYGVKSSLEDQKIKEKLQPAEIETCMKTITTILEWLE 595          
BLAST of CX291958 vs. ExPASy Swiss-Prot
Match: HSP70_LEIBR (Heat shock 70 kDa protein (Fragment) OS=Leishmania braziliensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.533e-24
Identity = 50/89 (56.18%), Postives = 68/89 (76.40%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDS 271
            TG++N ITITNDKGRLSKDEIE+MV +A KY+  D+  +  +EAKN LENYAY+M+NTV D  +  KL+ +D+  +  AID A++WL+S
Sbjct:   72 TGKRNHITITNDKGRLSKDEIERMVNDASKYEQADKMQRDALEAKNGLENYAYSMKNTVSDTNVSGKLEESDRSALNLAIDTALEWLNS 160          
BLAST of CX291958 vs. ExPASy Swiss-Prot
Match: HSP70_CLAHE (Heat shock 70 kDa protein OS=Cladosporium herbarum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.533e-24
Identity = 49/88 (55.68%), Postives = 67/88 (76.14%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLD 268
            TG+ NKI ITNDKGRLSK+EIE+M+ +AEKYK EDE    +++AKN LE+YAY+++NTV D K+  KL   DK+ +  AID+ + W+D
Sbjct:  494 TGKTNKIVITNDKGRLSKEEIERMLADAEKYKEEDEAEAGRIQAKNGLESYAYSLKNTVSDPKVEEKLSAEDKETLTGAIDKTVAWID 581          
BLAST of CX291958 vs. ExPASy Swiss-Prot
Match: HSP70_BRELC (Heat shock 70 kDa protein OS=Bremia lactucae GN=HSP70 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.533e-24
Identity = 49/90 (54.44%), Postives = 70/90 (77.78%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDS 271
            +TG++NKITITND+    + +I++MV EAEKYK+EDE +K ++EAKN LENY+YN+RNT+ DEK+  ++   DKK IED + + I WLD+
Sbjct:  497 STGKENKITITNDRVVCRRHDIDRMVSEAEKYKSEDEANKIRIEAKNGLENYSYNLRNTLNDEKLKDQIPEDDKKAIEDKVTETINWLDA 586          
BLAST of CX291958 vs. ExPASy Swiss-Prot
Match: HSP70_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=hsp70 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.920e-24
Identity = 49/89 (55.06%), Postives = 71/89 (79.78%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDS 271
            TG+ NKITITNDKGRLSK++IE+M+ +AEKYKAEDE    +++AKN LE+YAY+++NT+ + ++  ++   DKKK+ D ID+ I WLD+
Sbjct:  493 TGKTNKITITNDKGRLSKEDIERMLADAEKYKAEDEAEAARIQAKNGLESYAYSLKNTISEGQL--QISEDDKKKVSDKIDEVISWLDN 579          
BLAST of CX291958 vs. ExPASy Swiss-Prot
Match: HSP73_PLAFA (Heat shock 70 kDa protein PPF203 (Fragment) OS=Plasmodium falciparum PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.010e-23
Identity = 46/88 (52.27%), Postives = 69/88 (78.41%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLD 268
            TG++N+ITITNDKGRLSKD+I++MV +AEKYK EDE++K ++EA+N LENY YN++NT++DE + +K+   D +K    +   + WL+
Sbjct:   95 TGKQNQITITNDKGRLSKDDIDRMVNDAEKYKEEDEQNKNRIEARNNLENYCYNVKNTLQDENLKTKIPKDDSEKCMKTVKSVLDWLE 182          
BLAST of CX291958 vs. ExPASy Swiss-Prot
Match: HSP70_PLACB (Heat shock 70 kDa protein OS=Plasmodium cynomolgi (strain Berok) PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.319e-23
Identity = 47/89 (52.81%), Postives = 73/89 (82.02%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLD 268
            +TG++N ITITNDKGRLS +EI++MV +AEKYKAEDEE+KK++EA+N+LENY Y ++++++D+KI  KL P++ +    +I   ++WL+
Sbjct:  507 STGKQNHITITNDKGRLSPEEIDRMVNDAEKYKAEDEENKKRIEARNSLENYCYGVKSSLEDQKIKEKLQPSEIETCMKSITTILEWLE 595          
BLAST of CX291958 vs. ExPASy Swiss-Prot
Match: HSP74_YEAST (Heat shock protein SSA4 OS=Saccharomyces cerevisiae GN=SSA4 PE=1 SV=3)

HSP 1 Score: 107.842 bits (268), Expect = 1.723e-23
Identity = 49/89 (55.06%), Postives = 68/89 (76.40%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDS 271
            TG+ NKITITNDKGRLSK++I+KMV EAEK+KAEDE+  ++V+AKN LE+YA+ ++N+V +     K+   D +K+E A   AI WLD+
Sbjct:  493 TGKSNKITITNDKGRLSKEDIDKMVAEAEKFKAEDEQEAQRVQAKNQLESYAFTLKNSVSENNFKEKVGEEDARKLEAAAQDAINWLDA 581          
BLAST of CX291958 vs. ExPASy Swiss-Prot
Match: BIP_SOLLC (Luminal-binding protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.938e-23
Identity = 49/89 (55.06%), Postives = 72/89 (80.90%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLD 268
            TG+  KITITNDKGRLS++EIE+MV+EAE++  ED++ K+K++A+NALE Y YNM+N + D +K+  KL+  +K+KIE A  +A++WLD
Sbjct:  527 TGKAEKITITNDKGRLSQEEIERMVREAEEFAEEDKKVKEKIDARNALETYVYNMKNQINDKDKLADKLESDEKEKIETATKEALEWLD 615          
The following BLAST results are available for this feature:
BLAST of CX291958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
HSP74_TRYBB3.471e-2453.41Heat shock 70 kDa protein 4 OS=Trypanosoma brucei ... [more]
HSP70_PLAFA3.471e-2453.93Heat shock 70 kDa protein OS=Plasmodium falciparum... [more]
HSP70_LEIBR4.533e-2456.18Heat shock 70 kDa protein (Fragment) OS=Leishmania... [more]
HSP70_CLAHE4.533e-2455.68Heat shock 70 kDa protein OS=Cladosporium herbarum... [more]
HSP70_BRELC4.533e-2454.44Heat shock 70 kDa protein OS=Bremia lactucae GN=HS... [more]
HSP70_EMENI5.920e-2455.06Heat shock 70 kDa protein OS=Emericella nidulans G... [more]
HSP73_PLAFA1.010e-2352.27Heat shock 70 kDa protein PPF203 (Fragment) OS=Pla... [more]
HSP70_PLACB1.319e-2352.81Heat shock 70 kDa protein OS=Plasmodium cynomolgi ... [more]
HSP74_YEAST1.723e-2355.06Heat shock protein SSA4 OS=Saccharomyces cerevisia... [more]
BIP_SOLLC2.938e-2355.06Luminal-binding protein OS=Solanum lycopersicum PE... [more]

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Properties
Property NameValue
Genbank descriptionC04007D12SK FlavFr1 Citrus clementina cDNA clone C04007D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291958 ID=CX291958; Name=CX291958; organism=Citrus clementina; type=EST; length=273bp
GACAACGGGCCAAAAGAACAAGATCACAATCACCAACGATAAGGGTAGAT
TGTCAAAGGATGAAATTGAGAAGATGGTTCAAGAGGCCGAGAAGTACAAG
GCTGAAGACGAGGAGCACAAGAAGAAGGTCGAGGCCAAGAATGCCTTGGA
AAACTATGCCTACAATATGAGGAACACTGTCAAGGACGAGAAGATCGGCT
CCAAACTTGATCCAGCTGACAAGAAGAAGATTGAGGATGCCATTGATCAG
GCAATTCAATGGCTTGATAGCAA
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