CX292145

Overview
NameCX292145
Unique NameCX292145
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length729
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292145 vs. ExPASy Swiss-Prot
Match: S13A4_HUMAN (Solute carrier family 13 member 4 OS=Homo sapiens GN=SLC13A4 PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 4.031e-35
Identity = 76/233 (32.62%), Postives = 131/233 (56.22%), Query Frame = 1
Query:   19 REYLDKANLKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRA--GDGTASVVMATLLFIIPSMKQ---------------KGEKLMDWNKCKK-LPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVVPLLIQIAKTMHVHPLLLMVPGAIGAQFAFLLPTGTPSNIVGFTTGHIEIQDMIKTG 663
            RE L +  ++ E + LG +++ E +    F ++  LW TR     +PGW + F  +    D T SV +  LLF+IP+ K                  E ++ W   +K +PW I++L+G G+A+A G ++SGL+  +   +  L + P  A+  + C++ +I+TEF SN AT T+ +P+L  +++T+H++PL  ++P  +   FA +LP G P N + F+ GH +I+DM+K G
Sbjct:  354 REQLSEKRIQEEYEKLGDISYPEMVTGFFFILMTVLWFTRE-PGFVPGWDSFFEKKGYRTDATVSVFLGFLLFLIPAKKPCFGKKNDGENQEHSLGTEPIITWKDFQKTMPWEIVILVGGGYALASGSKSSGLSTWIGNQMLSLSSLPPWAVTLLACILVSIVTEFVSNPATITIFLPILCSLSETLHINPLYTLIPVTMCISFAVMLPVGNPPNAIVFSYGHCQIKDMVKAG 585          
BLAST of CX292145 vs. ExPASy Swiss-Prot
Match: S13A5_MOUSE (Solute carrier family 13 member 5 OS=Mus musculus GN=Slc13a5 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.928e-34
Identity = 84/229 (36.68%), Postives = 124/229 (54.15%), Query Frame = 1
Query:   43 LKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALF-----NDRAGDGTASVVMATLLFIIPSMKQKGE----------------KLMDWNKCK-KLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVVPLLIQIAKTMHVHPLLLMVPGAIGAQFAFLLPTGTPSNIVGFTTGHIEIQDMIKTG 663
            L  E   LG +++ E  VL  F +L+ LW +R     +PGW +            D T ++ +A LLFIIPS K K                   L+DW   + K+PW+I+LLLG GFA+A G  TSGL+  ++  ++ L       I  I+  + A+ TE TSN ATTTL +P+   +A+++ +HPL +M+P  + A  AF+LP  TP N + F  GH+ + DM+KTG
Sbjct:  306 LNEEYQKLGSLSYPECNVLFCFTLLVILWFSRD-PGFMPGWLSFAWVEGNTVHITDATVAIFVAILLFIIPSQKPKFNFSSQTEEERKTPFYPPALLDWKVAQEKVPWDIVLLLGGGFAMAKGCETSGLSKWMAAQMEPLRLVKPAVITLILSCLVAMTTECTSNVATTTLFLPIFASMARSIGIHPLYVMIPCTMSASLAFMLPVATPPNAIVFAYGHLRVVDMMKTG 533          
BLAST of CX292145 vs. ExPASy Swiss-Prot
Match: YKG6_CAEEL (Uncharacterized transporter B0285.6 OS=Caenorhabditis elegans GN=B0285.6 PE=2 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.212e-33
Identity = 81/231 (35.06%), Postives = 131/231 (56.71%), Query Frame = 1
Query:   22 EYLDKANLKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDR-AGDGTASVVMATLLFIIPSMKQ--------------KGEKLMDWNKCKK-LPWNIILLLGAGFAIADGVRTSGLADDLSKALDF-LEAAPYLAIAPIVCLISAIITEFTSNNATTTLVVPLLIQIAKTMHVHPLLLMVPGAIGAQFAFLLPTGTPSNIVGFTTGHIEIQDMIKTG 663
            E + K  + +  D LGPM +AEK  L +F + +  W++ S    IPGW  LF      D  + +V   LLFI P  K               + E L+DW+  ++  PW+IILLLGAGFAI+D VR SGL+  ++ +L+  +   P+  +  I+ ++  ++TEF++N+AT ++ +P+  ++A+ +  HPL   +P AIG  F+F+LP  TP+N + + T  I + DM+  G
Sbjct:  301 EEVAKRAVWKSYDQLGPMTWAEKSTLVIFVLAVLSWVS-SDPKVIPGWSDLFRKGYVTDSCSGLVAVFLLFIWPKKKPDFRIFRKDKSRPSVRQEPLIDWDCVRRRFPWSIILLLGAGFAISDAVRVSGLSSLIACSLNSTISKMPFFVMQIILSIVVVVMTEFSTNSATASIFIPISFKMAEAVGAHPLYFSIPTAIGPSFSFMLPMATPANAIVYETKTIRMIDMVSCG 530          
BLAST of CX292145 vs. ExPASy Swiss-Prot
Match: S13A1_RAT (Solute carrier family 13 member 1 OS=Rattus norvegicus GN=Slc13a1 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.212e-33
Identity = 79/223 (35.43%), Postives = 126/223 (56.50%), Query Frame = 1
Query:   43 LKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAG---DGTASVVMATLLFIIPSMK-----QKGE-------KLMDWNKCKK-LPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVVPLLIQIAKTMHVHPLLLMVPGAIGAQFAFLLPTGTPSNIVGFTTGHIEIQDMIKTG 663
            +K+E + LGPM + E + L +F ++  LW +R     + GW  LF++  G   D T ++V   L F+IP+ K       G+        L+ W + +  +PW+I +L+G GFA+ADG + SGL+  +   L  L + P   I  I  LI   +TE  SN AT T++ P+L  +A+ +HV+PL +++P  +   FAFLLP   P N + F+ GH+++ DM+K G
Sbjct:  333 IKQEYEKLGPMRYQEIVTLVIFIVMALLWFSRD-PGFVTGWSVLFSEYPGYVTDSTVALVAGILFFLIPAKKLTKMTSTGDIIAFDYSPLITWKEFQSFMPWDIAILVGGGFALADGCQVSGLSSWIGSKLSPLGSLPVWLIILISSLIVTSLTEVASNPATITILFPILSPLAEAIHVNPLHILLPSTLCTSFAFLLPVANPPNAIVFSYGHLKVIDMVKAG 554          
BLAST of CX292145 vs. ExPASy Swiss-Prot
Match: S13A1_HUMAN (Solute carrier family 13 member 1 OS=Homo sapiens GN=SLC13A1 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.772e-33
Identity = 79/223 (35.43%), Postives = 126/223 (56.50%), Query Frame = 1
Query:   43 LKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAG---DGTASVVMATLLFIIPSMK-----QKGE-------KLMDWNKCKK-LPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVVPLLIQIAKTMHVHPLLLMVPGAIGAQFAFLLPTGTPSNIVGFTTGHIEIQDMIKTG 663
            +K+E   LGP+ + E + L +F ++  LW +R     +PGW ALF++  G   D T ++++  L F+IP+         GE        L+ W + +  +PW+I +L+G GFA+ADG   SGL+  +   L  L + P   I  I  L+   +TE  SN AT TL +P+L  +A+ +HV+PL +++P  +   FAFLLP   P N + F+ GH+++ DM+K G
Sbjct:  333 IKQEYQKLGPIRYQEIVTLVLFIIMALLWFSRD-PGFVPGWSALFSEYPGFATDSTVALLIGLLFFLIPAKTLTKTTPTGEIVAFDYSPLITWKEFQSFMPWDIAILVGGGFALADGCEESGLSKWIGNKLSPLGSLPAWLIILISSLMVTSLTEVASNPATITLFLPILSPLAEAIHVNPLYILIPSTLCTSFAFLLPVANPPNAIVFSYGHLKVIDMVKAG 554          
BLAST of CX292145 vs. ExPASy Swiss-Prot
Match: S13A1_MOUSE (Solute carrier family 13 member 1 OS=Mus musculus GN=Slc13a1 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.927e-33
Identity = 79/223 (35.43%), Postives = 126/223 (56.50%), Query Frame = 1
Query:   43 LKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAG---DGTASVVMATLLFIIPSMK-----QKGE-------KLMDWNKCKK-LPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVVPLLIQIAKTMHVHPLLLMVPGAIGAQFAFLLPTGTPSNIVGFTTGHIEIQDMIKTG 663
            +K+E + LGPM + E + L +F ++  LW +R     + GW  LF++  G   D T ++V   L F+IP+ K       GE        L+ W + +  +PW+I +L+G GFA+ADG + SGL++ +   L  L + P   I  I  LI   +TE  SN AT T++ P+L  +A+ + V+PL +++P  +   FAFLLP   P N + F+ GH+++ DM+K G
Sbjct:  332 IKQEYEKLGPMRYQEIVTLVIFIVMALLWFSRD-PGFVTGWSVLFSEYPGYVTDSTVALVAGILFFLIPAKKVTKMTSAGEIIAFDYTPLITWKEFQSFMPWDIAILVGGGFALADGCQVSGLSNWIGSKLSPLGSLPVRLIILISSLIVTSLTEVASNPATITILFPILSPLAEAIQVNPLQILLPSTLCTSFAFLLPVANPPNAIVFSYGHLKVIDMVKAG 553          
BLAST of CX292145 vs. ExPASy Swiss-Prot
Match: NAD1_CAEEL (Sodium-dependent low-affinity dicarboxylate transporter 1 OS=Caenorhabditis elegans GN=nac-1 PE=2 SV=3)

HSP 1 Score: 140.584 bits (353), Expect = 8.404e-33
Identity = 71/219 (32.42%), Postives = 125/219 (57.08%), Query Frame = 1
Query:   43 LKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDR-AGDGTASVVMATLLFIIPS----------MKQKGEKLMDWNKCK-KLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVVPLLIQIAKTMHVHPLLLMVPGAIGAQFAFLLPTGTPSNIVGFTTGHIEIQDMIKTG 663
            L+++ + L   +FAE  V+  F +L+ LW+ R     +PGWG +F D    D T+++ +  LLF +P            ++    L+DW   + + PW+++ LLG GFA+A GV+ SGL+ D+   + +L+   +  I  I  +IS  +T   SN    ++ +P++ ++A+++ + PL  M+P  I A FAFLLP  TP N + F++G++++ DM  +G
Sbjct:  307 LQQKYNELHAFSFAEMAVIFCFALLLVLWILRE-PQVVPGWGEMFKDEFVSDATSAMFIVILLFTLPEKLPSSRGSSEQRKASSGLLDWATVQDRFPWSVLFLLGGGFALAAGVKESGLSHDIGAIMRYLDVFNHNIIMLICIIISVTLTNVCSNTVIASIFIPIVAELARSLEIDPLNFMLPVTISASFAFLLPVATPPNAIVFSSGYLKVFDMFVSG 524          
BLAST of CX292145 vs. ExPASy Swiss-Prot
Match: NAD3_CAEEL (Sodium-dependent high-affinity dicarboxylate transporter 3 OS=Caenorhabditis elegans GN=nac-3 PE=2 SV=3)

HSP 1 Score: 139.043 bits (349), Expect = 2.445e-32
Identity = 78/222 (35.14%), Postives = 127/222 (57.21%), Query Frame = 1
Query:   43 LKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRA-GDGTASVVMATLLFIIPS-------------MKQKGEKLMDWNKCKK-LPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVVPLLIQIAKTMHVHPLLLMVPGAIGAQFAFLLPTGTPSNIVGFTTGHIEIQDMIKTG 663
            LK   + L  M +AEK V   F +L++LW+ R+    +PG+G  F   A  D T+++++A LLF++PS             +K++G  LMDW   ++  PW+++LLLG GFA+A GV+ SGL+  +  +L  +E  P   +  +  LI+ +IT   SN  T ++ VP++  +A+    HP  LM+P  + + FAF+ P GTP N + F +G +++ DM   G
Sbjct:  306 LKTRYNELPRMTYAEKSVFVCFCILLSLWVFRN-PGVVPGFGVFFKKGAYTDATSAMIVAFLLFVLPSERPDLATYIKKEDLKKRG-CLMDWKTMQETFPWSVVLLLGGGFALAAGVKESGLSLLIGNSLSSIEHLPLWILQLLTMLIAMVITNICSNTVTASIFVPIVATLAQRAGHHPFTLMLPTTLASSFAFIFPVGTPPNAIVFGSGMVKVSDMAFVG 525          
BLAST of CX292145 vs. ExPASy Swiss-Prot
Match: NAD2_CAEEL (Sodium-dependent high-affinity dicarboxylate transporter 2 OS=Caenorhabditis elegans GN=nac-2 PE=2 SV=3)

HSP 1 Score: 115.161 bits (287), Expect = 3.781e-25
Identity = 73/220 (33.18%), Postives = 117/220 (53.18%), Query Frame = 1
Query:   28 LDKANLKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDR--AGDGTASVVMATLLFIIPSMK----QKGEKLMDWNKCK-KLPWNIILLLGAGFAIADGVRTSGLADDLSKAL-DFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVVPLLIQIAKTMHVHPLLLMVPGAIGAQFAFLLPTGTPSNIVGFTTGHIEIQDMIKTG 663
            L + N++   + LG +++ EK V   F +LI  W++R      PGWG L   R    D  + V+++ +LF+ P            ++ W   K K  W+  LL+GAG+AI++GV  SGL+  +S  + +       L +   V  I  I+TEF SN +T ++ +P+ + +A++M VHPL L +P  +   FAF+LP  TP N V + T  I + +MI  G
Sbjct:  289 LIEKNIQTMYEDLGDVSWGEKSVFVFFILLIGSWISRD-PGFTPGWGDLLPHRNFISDSVSGVLISCILFVWPKDPFDPIDPMAPILKWTDMKSKFSWSCTLLIGAGYAISEGVDKSGLSRLISCGMKNIFVGMSSLPLQLTVTTIIVIMTEFASNVSTGSIFIPISLGVAESMGVHPLYLALPTTVACSFAFMLPISTPPNAVVYDTKVISMVEMIVCG 507          
BLAST of CX292145 vs. ExPASy Swiss-Prot
Match: INDY1_DROME (Protein I'm not dead yet OS=Drosophila melanogaster GN=Indy PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.294e-22
Identity = 61/217 (28.11%), Postives = 111/217 (51.15%), Query Frame = 1
Query:   64 LGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDR-AGDGTASVVMATLLFIIPS-------MKQKG--------EKLMDWNKCK-KLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVVPLLIQIAKTMHVHPLLLMVPGAIGAQFAFLLPTGTPSNIVGFTTGHIEIQDMIKTG 663
            LGPM+  E  V+ +F  ++ ++ TR       GW  L N +   +   ++ +  + F++P+         ++G          L+ W   + K+PW ++ LLG GFA+A+G + SG+A  +  AL  L+  P   +  +V L++  +T F+SN A   +++P+L +++  + +HPL L++P  +    AF LP  TP N +     +I  +DM   G
Sbjct:  329 LGPMSIHEIQVMILFIFMVVMYFTRK-PGIFLGWADLLNSKDIRNSMPTIFVVVMCFMLPANYAFLRYCTRRGGPVPTGPTPSLITWKFIQTKVPWGLVFLLGGGFALAEGSKQSGMAKLIGNALIGLKVLPNSVLLLVVILVAVFLTAFSSNVAIANIIIPVLAEMSLAIEIHPLYLILPAGLACSMAFHLPVSTPPNALVAGYANIRTKDMAIAG 544          
The following BLAST results are available for this feature:
BLAST of CX292145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
S13A4_HUMAN4.031e-3532.62Solute carrier family 13 member 4 OS=Homo sapiens ... [more]
S13A5_MOUSE9.928e-3436.68Solute carrier family 13 member 5 OS=Mus musculus ... [more]
YKG6_CAEEL2.212e-3335.06Uncharacterized transporter B0285.6 OS=Caenorhabdi... [more]
S13A1_RAT2.212e-3335.43Solute carrier family 13 member 1 OS=Rattus norveg... [more]
S13A1_HUMAN3.772e-3335.43Solute carrier family 13 member 1 OS=Homo sapiens ... [more]
S13A1_MOUSE4.927e-3335.43Solute carrier family 13 member 1 OS=Mus musculus ... [more]
NAD1_CAEEL8.404e-3332.42Sodium-dependent low-affinity dicarboxylate transp... [more]
NAD3_CAEEL2.445e-3235.14Sodium-dependent high-affinity dicarboxylate trans... [more]
NAD2_CAEEL3.781e-2533.18Sodium-dependent high-affinity dicarboxylate trans... [more]
INDY1_DROME2.294e-2228.11Protein I'm not dead yet OS=Drosophila melanogaste... [more]

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Properties
Property NameValue
Genbank descriptionC04011A10SK FlavFr1 Citrus clementina cDNA clone C04011A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292145 ID=CX292145; Name=CX292145; organism=Citrus clementina; type=EST; length=729bp
CTCGTGCGATTCGGCACGAGGGAGTATTTGGACAAAGCAAATCTCAAGAG
AGAGCTTGACATGTTAGGTCCAATGGCTTTTGCTGAAAAGATGGTACTAG
CTGTATTTGGGATGCTAATAGCATTGTGGATGACAAGATCAATAACAGAT
GACATTCCAGGTTGGGGAGCACTCTTCAATGACCGTGCTGGTGATGGAAC
TGCTAGTGTTGTGATGGCAACATTGTTGTTCATAATTCCGAGCATGAAGC
AAAAGGGAGAAAAATTGATGGATTGGAACAAATGCAAGAAGCTACCTTGG
AACATTATATTGCTTTTAGGGGCTGGCTTTGCTATAGCTGATGGAGTCAG
GACTAGTGGTCTTGCTGATGATCTATCAAAAGCATTGGATTTCCTGGAGG
CAGCGCCCTATTTAGCCATTGCACCCATCGTATGTCTGATTAGCGCGATT
ATTACTGAATTCACATCAAATAATGCCACAACAACCCTCGTTGTTCCACT
TCTGATCCAAATAGCAAAAACTATGCATGTTCATCCATTGCTTCTTATGG
TTCCTGGAGCAATTGGAGCACAATTTGCTTTCTTGTTGCCGACTGGAACC
CCTTCAAATATTGTTGGATTCACAACCGGGCACATCGAAATTCAAGATAT
GATCAAGACAGGGCTGCCCCTTAGATTGCTGGCATTGCTGCTCTGGCCTT
TCTATGCCTACACTGGTGCTTATGTTTTT
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