CX292147

Overview
NameCX292147
Unique NameCX292147
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length552
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292147 vs. ExPASy Swiss-Prot
Match: ACON_RICBR (Aconitate hydratase OS=Rickettsia bellii (strain RML369-C) GN=acnA PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 6.301e-41
Identity = 87/160 (54.37%), Postives = 115/160 (71.88%), Query Frame = 3
Query:   51 YSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLD 530
            Y+  LEL+L++V   ++GP+RP DRV L ++ + +   L     F    +  +T+  V   ++     E+ +G VVIAAITSCTNTSNPSVM+GA L+AKKA E GL+VKPWVKTSLAPGS VVT+YL  SGL +YL++ GF++VGYGCTTCIGNSG L+
Sbjct:  351 YTDILELDLSEVTSSLAGPRRPQDRVNLGDVSSGFKKELST---FSSNNISIDTKHAVANQNY-----EIGNGDVVIAAITSCTNTSNPSVMIGAALLAKKAIEQGLKVKPWVKTSLAPGSKVVTEYLKSSGLNQYLDQLGFNLVGYGCTTCIGNSGPLN 502          
BLAST of CX292147 vs. ExPASy Swiss-Prot
Match: ACON_RICPR (Aconitate hydratase OS=Rickettsia prowazekii GN=acnA PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.404e-40
Identity = 95/170 (55.88%), Postives = 119/170 (70.00%), Query Frame = 3
Query:   24 YN-EPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLD 530
            YN E  QE  Y+  LEL+L+ V   ++GPKRP DRV L  + +++ + L        FA+  +  +K  K++   Q   + +G VVIAAITSCTNTSNPSVM+GA L+AKKA E GL VKPWVKTSLAPGS VVT+YL  SGL KYL+  GF++VGYGCTTCIGNSG L+
Sbjct:  344 YNCEDTQE--YTEVLELDLSTVYSSLAGPKRPQDRVNLNCVASNFQNELPY------FALANKDIDK--KYAVANQNYAIGNGDVVIAAITSCTNTSNPSVMIGAALLAKKALEHGLNVKPWVKTSLAPGSKVVTEYLKLSGLDKYLDALGFNLVGYGCTTCIGNSGSLN 503          
BLAST of CX292147 vs. ExPASy Swiss-Prot
Match: ACON1_ECOLI (Aconitate hydratase 1 OS=Escherichia coli (strain K12) GN=acnA PE=1 SV=3)

HSP 1 Score: 165.622 bits (418), Expect = 1.404e-40
Identity = 89/176 (50.57%), Postives = 121/176 (68.75%), Query Frame = 3
Query:   24 YNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDEICASAI 551
            +  P  E +++S LEL++ DVE  ++GPKRP DRV L ++   + +  + +V     A  K+ Q   V +  +G   +L  G+VVIAAITSCTNTSNPSV++ AGL+AKKA  LGL+ +PWVK SLAPGS VV+ YL ++ L  YL+E GF++VGYGCTTCIGNSG L +   +AI
Sbjct:  350 WRNPGDEPIFTSTLELDMNDVEASLAGPKRPQDRVALPDVPKAFAASNELEVN----ATHKDRQP--VDYVMNGHQYQLPDGAVVIAAITSCTNTSNPSVLMAAGLLAKKAVTLGLKRQPWVKASLAPGSKVVSDYLAKAKLTPYLDELGFNLVGYGCTTCIGNSGPLPDPIETAI 519          
BLAST of CX292147 vs. ExPASy Swiss-Prot
Match: ACON_CORJK (Aconitate hydratase OS=Corynebacterium jeikeium (strain K411) GN=acn PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.188e-39
Identity = 92/212 (43.40%), Postives = 119/212 (56.13%), Query Frame = 3
Query:   30 EPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEK--------------------------------------VVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDEICASAI 551
            +P++E  YS YLEL+L+ V P I+GPKRP DR+ L + KA +   L N V     AV  +   +                                       V  +++G+  EL HG V IA+ITSCTNTSNPSVM+GAGL+A+ A   GL+  PWVKTS+APGS VV  Y  ++GL K L   GF++VGYGCTTCIGNSG L E  ++ I
Sbjct:  345 DPEKEVEYSEYLELDLSTVVPSIAGPKRPQDRIELNDSKAQFRKDLHNYVEADASAVTPDFDAEGPATENTSAQTAGTPASAADAKGNIPSAAAGAEGRPSNPVTVNYNGEDIELDHGMVAIASITSCTNTSNPSVMVGAGLLARNAAAKGLKSAPWVKTSMAPGSQVVNGYYEKAGLWKDLEAMGFYLVGYGCTTCIGNSGPLPEEISAGI 556          
BLAST of CX292147 vs. ExPASy Swiss-Prot
Match: ACON_MYCAV (Aconitate hydratase OS=Mycobacterium avium GN=acn PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.241e-38
Identity = 90/215 (41.86%), Postives = 122/215 (56.74%), Query Frame = 3
Query:   24 YNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGF----KGFAVPKETQEKVVKFSFHGQPAE-----------------------------------LKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDEICASAI 551
            +++P  E  +S YLEL+L+ V P I+GPKRP DR+ L + K+ +   + + VG     +G++   E  ++    S  G P+                                    L HG+VVIAA+TSCTNTSNP VMLGA L+A++  E GL  KPWVKT++APGS VV  Y  ++GL  YL + GF++VGYGCTTCIGNSG L E  + AI
Sbjct:  369 WHDPAHEPAFSEYLELDLSQVVPSIAGPKRPQDRIALSQAKSVFREQIPSYVGDGDGQQGYSKLDEVVDETFPASDPGAPSNGHADDLPAVQSAAAHANGRPSNPVTVRSDELGEFVLDHGAVVIAAVTSCTNTSNPEVMLGAALLARQRVEKGLASKPWVKTTMAPGSQVVHDYYDKAGLWPYLEKLGFYLVGYGCTTCIGNSGPLPEEISKAI 583          
BLAST of CX292147 vs. ExPASy Swiss-Prot
Match: ACON_CORDI (Aconitate hydratase OS=Corynebacterium diphtheriae GN=acn PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.578e-36
Identity = 96/221 (43.44%), Postives = 122/221 (55.20%), Query Frame = 3
Query:    3 ANKMFVDYNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCL---------DNKVGFKGF----AVPKETQE-------------------------KVVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDEICASAI 551
            A  M+++ + P+ E  YS YLEL+L+ V P I+GPKRP DR+ L E K  +   L         D  +  K      AV KE ++                          VV  S +G    L HG V IA+ITSCTNTSNPSVM+GAGL+A+KA   GL+ KPWVKT  APGS VV  Y  ++ L K L   GF++ G+GCTTCIGNSG L E  ++AI
Sbjct:  339 AQGMWLEQDAPEAE--YSEYLELDLSTVVPSIAGPKRPQDRILLTEAKEQFRKDLPDYCSAEPVDESLPAKRMDSEGAVQKEGEDVAGYNSSRAGHGESAAEGAAGRQSNPVVVSSPNGGEYTLDHGMVAIASITSCTNTSNPSVMIGAGLIARKAAAKGLKAKPWVKTICAPGSQVVDGYYKRADLWKDLEALGFYLSGFGCTTCIGNSGPLPEEISAAI 557          
BLAST of CX292147 vs. ExPASy Swiss-Prot
Match: ACON_COREF (Aconitate hydratase OS=Corynebacterium efficiens GN=acn PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 2.319e-35
Identity = 94/223 (42.15%), Postives = 120/223 (53.81%), Query Frame = 3
Query:    3 ANKMFVDYNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLD-------------------NKVGFKGFAV----------PKETQEK-----------VVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDEICASAI 551
            A  M+++ + P+ E  YS YLEL+L+ V P I+GPKRP DR+ L E K  +   L                    N+ GF+  +           P E +             V   S  G    + HG V IA+ITSCTNTSNPSVM+GAGL+A+KA E GL+ KPWVKT  APGS VV  Y  ++ L K L   GF++ G+GCTTCIGNSG L E  + AI
Sbjct:  339 AQGMWLEQDAPEAE--YSEYLELDLSTVVPSIAGPKRPQDRILLSEAKEQFREDLKAYTNDPVQVDQSIPAKRMANEGGFQPGSTSDLDNYNASWPGEGESAAANAEGRPSNPVTVVSPQGGEYTIDHGMVAIASITSCTNTSNPSVMIGAGLIARKAAEKGLKSKPWVKTICAPGSQVVDGYYQRADLWKDLEALGFYLSGFGCTTCIGNSGPLPEEISEAI 559          
BLAST of CX292147 vs. ExPASy Swiss-Prot
Match: ACON_CORGL (Aconitate hydratase OS=Corynebacterium glutamicum GN=acn PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 1.151e-34
Identity = 94/223 (42.15%), Postives = 122/223 (54.71%), Query Frame = 3
Query:    3 ANKMFVDYNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCL----DNKVGF-----------KGFAVPKETQE------------KVVKFSFHGQPAE-------------LKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDEICASAI 551
            A  M++D  E   E  YS YLEL+L+ V P I+GPKRP DR+ L E K  +   L    D+ V             +G   P+   E            + +     G+P++             + HG V IA+ITSCTNTSNPSVM+GAGL+A+KA E GL+ KPWVKT  APGS VV  Y  ++ L K L   GF++ G+GCTTCIGNSG L E  ++AI
Sbjct:  339 AQGMWLD--EDTVEAEYSEYLELDLSTVVPSIAGPKRPQDRILLSEAKEQFRKDLPTYTDDAVSVDTSIPATRMVNEGGGQPEGGVEADNYNASWAGSGESLATGAEGRPSKPVTVASPQGGEYTIDHGMVAIASITSCTNTSNPSVMIGAGLIARKAAEKGLKSKPWVKTICAPGSQVVDGYYQRADLWKDLEAMGFYLSGFGCTTCIGNSGPLPEEISAAI 559          
The following BLAST results are available for this feature:
BLAST of CX292147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
ACON_RICBR6.301e-4154.38Aconitate hydratase OS=Rickettsia bellii (strain R... [more]
ACON_RICPR1.404e-4055.88Aconitate hydratase OS=Rickettsia prowazekii GN=ac... [more]
ACON1_ECOLI1.404e-4050.57Aconitate hydratase 1 OS=Escherichia coli (strain ... [more]
ACON_CORJK1.188e-3943.40Aconitate hydratase OS=Corynebacterium jeikeium (s... [more]
ACON_MYCAV2.241e-3841.86Aconitate hydratase OS=Mycobacterium avium GN=acn ... [more]
ACON_CORDI3.578e-3643.44Aconitate hydratase OS=Corynebacterium diphtheriae... [more]
ACON_COREF2.319e-3542.15Aconitate hydratase OS=Corynebacterium efficiens G... [more]
ACON_CORGL1.151e-3442.15Aconitate hydratase OS=Corynebacterium glutamicum ... [more]

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Properties
Property NameValue
Genbank descriptionC04011B01SK FlavFr1 Citrus clementina cDNA clone C04011B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292147 ID=CX292147; Name=CX292147; organism=Citrus clementina; type=EST; length=552bp
GAGCAAATAAAATGTTTGTCGACTACAATGAGCCCCAACAAGAAAGGGTG
TACTCATCATACCTAGAATTGAACCTTGCTGATGTTGAGCCTTGTATTTC
GGGACCAAAGAGACCTCATGATCGGGTTCCCTTGAAGGAAATGAAGGCAG
ATTGGCATTCATGTCTTGACAATAAAGTCGGCTTCAAGGGCTTTGCTGTA
CCTAAAGAGACACAGGAAAAAGTGGTCAAGTTTTCATTCCATGGACAGCC
AGCAGAGCTTAAGCACGGGAGTGTCGTGATTGCTGCAATCACAAGTTGCA
CCAATACATCAAACCCCAGTGTTATGCTTGGTGCTGGTCTTGTTGCCAAA
AAGGCTTGTGAACTTGGTTTGCAGGTCAAGCCATGGGTTAAAACAAGTCT
TGCCCCAGGCTCAGGAGTTGTTACTAAATATTTACTCCAGAGTGGACTGC
AAAAATATTTAAATGAGCAAGGATTCCATATTGTTGGATATGGATGCACA
ACATGTATTGGAAATTCAGGGGATCTGGATGAAATCTGTGCATCTGCTAT
TA
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