CX292171

Overview
NameCX292171
Unique NameCX292171
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292171 vs. ExPASy Swiss-Prot
Match: TSYL4_MOUSE (Testis-specific Y-encoded-like protein 4 OS=Mus musculus GN=Tspyl4 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.300e-19
Identity = 54/162 (33.33%), Postives = 88/162 (54.32%), Query Frame = 3
Query:  192 KSKMVADKGKKTKVEEENAEQIDSELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDTKLTKTFTFLDDDGSMKITATSIKWKEG 677
            K K VA  GK+       A +I+      ++ L+ I  EL  +N +A    L++E+K+  +R+    +R+ II++IP FW+TAF +HP L  ++S +D+ + RY+ +LEVE+ K  + G    F F  NPYF +  L K +      G +   +T I+W  G
Sbjct:  174 KEKKVAGGGKEET--RPRAPKINC-----MDSLEAIDQELSNVNAQADRAFLQLERKFGRMRRLHMQRRSFIIQNIPGFWVTAFRNHPQLSPMISGQDEDMMRYMINLEVEELKQPRVGCKFKFIFQSNPYFRNEGLVKEYE-RRSSGRVVSLSTPIRWHRG 327          
BLAST of CX292171 vs. ExPASy Swiss-Prot
Match: TSYL5_MOUSE (Testis-specific Y-encoded-like protein 5 OS=Mus musculus GN=Tspyl5 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.896e-19
Identity = 52/157 (33.12%), Postives = 88/157 (56.05%), Query Frame = 3
Query:  207 ADKGKKTKVEEENAEQIDSELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDTKLTKTFTFLDDDGSMKITATSIKWKEG 677
            A  G++ K+ E++A       V S++ L+ +Q +LE +N +A    L + +K+ ++R    ++RN +I+SIP FW  AF +HP L   L+ +D+++  YL+ LEVE+    + GY I F F  NPYF++  L K +      G +   +  I+W  G
Sbjct:  172 APVGEEKKMTEKHAGAGSPATVGSMDTLETVQLKLETMNAQADRAYLRLSRKFGQLRLHHLERRNLLIQSIPGFWGQAFQNHPQLSAFLNTKDKEVLSYLNRLEVEELGLARLGYKIKFYFGRNPYFQNKVLIKEYG-CGPSGQVVSRSAPIQWLPG 327          
BLAST of CX292171 vs. ExPASy Swiss-Prot
Match: TSYL5_HUMAN (Testis-specific Y-encoded-like protein 5 OS=Homo sapiens GN=TSPYL5 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.896e-19
Identity = 50/150 (33.33%), Postives = 84/150 (56.00%), Query Frame = 3
Query:  228 KVEEENAEQIDSELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDTKLTKTFTFLDDDGSMKITATSIKWKEG 677
            K EE +A         S++ L+ +Q +LE +N +A    L + +K+ ++R    ++RN +I++IP FW  AF +HP L   L+ +++++  YL+SLEVE+    + GY I F F  NPYF++  L K +      G +   +T I+W  G
Sbjct:  185 KKEERDAGSGPPATEGSMDTLENVQLKLENMNAQADRAYLRLSRKFGQLRLQHLERRNHLIQNIPGFWGQAFQNHPQLASFLNSQEKEVLSYLNSLEVEELGLARLGYKIKFYFDRNPYFQNKVLIKEYG-CGPSGQVVSRSTPIQWLPG 333          
BLAST of CX292171 vs. ExPASy Swiss-Prot
Match: TSYL1_PONAB (Testis-specific Y-encoded-like protein 1 OS=Pongo abelii GN=TSPYL1 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.783e-19
Identity = 48/156 (30.77%), Postives = 90/156 (57.69%), Query Frame = 3
Query:  219 KKTKVEEENAEQIDS---ELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDTKLTKTFTFLDDDGSMKITATSIKWKEG 677
            ++ ++EEE  E+         L ++ L+ IQ EL+ +N +A     ++E K+  +R+   ++RN II++IP FW+TAF +HP L  ++  +D ++ RY+++LEV++ +  ++G    F F  NPYF +  + K +  +   G +   +T I W+ G
Sbjct:  207 EEDRLEEEAREEEGPWPLHEALRMDPLEAIQLELDTVNAQADRAFQQLEHKFGRMRRHYLERRNYIIQNIPGFWMTAFRNHPQLSAMIRGQDAEMLRYITNLEVKELRHPRTGCKFKFFFRRNPYFRNKLIVKEYE-VRSSGRVVSLSTPIIWRRG 361          
BLAST of CX292171 vs. ExPASy Swiss-Prot
Match: TSYL1_MOUSE (Testis-specific Y-encoded-like protein 1 OS=Mus musculus GN=Tspyl1 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.783e-19
Identity = 46/130 (35.38%), Postives = 77/130 (59.23%), Query Frame = 3
Query:  288 LQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDTKLTKTFTFLDDDGSMKITATSIKWKEG 677
            L+ IQ EL+ +N +A      +EQK+  +R+   ++RN II++IP FW+TAF +HP L  ++   D ++ RY++SLEV++ +  K+G    F F  NPYF +  + K +  +   G +   +T I W+ G
Sbjct:  174 LEAIQLELDTVNAQADRAFQHLEQKFGRMRRHYLERRNYIIQNIPGFWMTAFRNHPQLSAMIRGRDAEMLRYVTSLEVKELRHPKTGCKFKFFFRRNPYFRNKLIVKEYE-VRSSGRVVSLSTPIIWRRG 302          
BLAST of CX292171 vs. ExPASy Swiss-Prot
Match: TSYL1_HUMAN (Testis-specific Y-encoded-like protein 1 OS=Homo sapiens GN=TSPYL1 PE=1 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 3.783e-19
Identity = 48/156 (30.77%), Postives = 90/156 (57.69%), Query Frame = 3
Query:  219 KKTKVEEENAEQIDS---ELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDTKLTKTFTFLDDDGSMKITATSIKWKEG 677
            ++ ++EEE  E+         L ++ L+ IQ EL+ +N +A     ++E K+  +R+   ++RN II++IP FW+TAF +HP L  ++  +D ++ RY+++LEV++ +  ++G    F F  NPYF +  + K +  +   G +   +T I W+ G
Sbjct:  206 EEDRLEEEAREEEGPWPLHEALRMDPLEAIQLELDTVNAQADRAFQQLEHKFGRMRRHYLERRNYIIQNIPGFWMTAFRNHPQLSAMIRGQDAEMLRYITNLEVKELRHPRTGCKFKFFFRRNPYFRNKLIVKEYE-VRSSGRVVSLSTPIIWRRG 360          
BLAST of CX292171 vs. ExPASy Swiss-Prot
Match: TSYL1_BOVIN (Testis-specific Y-encoded-like protein 1 OS=Bos taurus GN=TSPYL1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.437e-18
Identity = 44/135 (32.59%), Postives = 80/135 (59.26%), Query Frame = 3
Query:  273 LSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDTKLTKTFTFLDDDGSMKITATSIKWKEG 677
            L +  L+ IQ EL+ +N +A     ++E K+  +R+   ++RN II++IP FW+TAF +HP L  ++  +D ++ RY+++LEV++ +  ++G    F F  NPYF +  + K +  +   G +   +T I W+ G
Sbjct:  222 LRMNPLEAIQLELDSVNAQADRAFQQLEHKFGRMRRHYLERRNYIIQNIPGFWVTAFRNHPQLSPMIRGQDAEMLRYITNLEVKELRHPRTGCKFKFFFRRNPYFRNKLIVKEYE-VRASGRVVSLSTPIIWRRG 355          
BLAST of CX292171 vs. ExPASy Swiss-Prot
Match: TSYL3_HUMAN (Testis-specific Y-encoded-like protein 3 OS=Homo sapiens GN=TSPYL3 PE=5 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.134e-18
Identity = 47/173 (27.17%), Postives = 91/173 (52.60%), Query Frame = 3
Query:  171 KTPT*ATKSKMVADKGKKTKVEEENAEQIDSELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDTKLTKTFTFLDDDGSMKITATSIKWKEGMGIP 689
            K P    + +   ++ ++   E +   ++ +   L ++ L+ IQ E E ++ +A    L +E+++  + +    +R+ II++IP FW+TAF++HP L  ++S  D+ +  YL +LEV + +  ++G    F F  NPYF++  + K +      G +   AT I+W  G   P
Sbjct:  110 KEPAEEVEKQQEGEEKQEVAAEAQEGPRLLNLGALIVDPLEAIQWEAEAVSAQADRAYLPLERRFGRMHRLYLARRSFIIQNIPGFWVTAFLNHPQLSAMISPRDEDMLCYLMNLEVRELRHSRTGCKFKFRFWSNPYFQNKVIVKEYE-CRASGRVVSIATRIRWHWGQEPP 281          
BLAST of CX292171 vs. ExPASy Swiss-Prot
Match: TSPY1_RAT (Testis-specific Y-encoded protein 1 OS=Rattus norvegicus GN=Tspy1 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.997e-16
Identity = 42/130 (32.31%), Postives = 76/130 (58.46%), Query Frame = 3
Query:  279 IEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDTKLTKTFTFLDDDGSMKITATSIKW 668
            +E+L+ +Q EL  +N   S     ++ K +++R+P +D+R  II+ IP FW  A ++HP +  ++S +D+ +  Y+ SLEVE++        + F FS NPYF +  +TK +  L   G  +  +++I+W
Sbjct:  149 MEELELLQLELSFVNARCSGAFARIKAKVAKMRRPHFDRRKTIIQGIPGFWAKAMMNHPQMSSIISNQDEDLLSYMLSLEVEEYNPGLRMCRMMFFFSENPYFRNDIVTKDYQ-LSIIGYKESDSSTIEW 277          
BLAST of CX292171 vs. ExPASy Swiss-Prot
Match: ASP_PLAFS (Aspartic acid-rich protein OS=Plasmodium falciparum (isolate fcm17 / Senegal) PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.914e-16
Identity = 43/129 (33.33%), Postives = 75/129 (58.14%), Query Frame = 3
Query:  297 IQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNF--SPNPYFEDTKLTKTFTFLDDDGSMKITATSIKWKEG 677
            +Q ++E+++ + + + + ++++Y E +KP+++KR++II+ IP FW      HPAL +++  ED  I  +L  L+++D  D    Y ITF F      + E   L K  TF D++    +  T IKWKEG
Sbjct:   20 VQKDIEQLDIKCAHEQMNIQKQYDEKKKPLFEKRDEIIQKIPGFWANTLRKHPALSDIV-PEDIDILNHLVKLDLKDNMDNNGSYKITFIFGEKAKEFMEPLTLVKHVTF-DNNQEKVVECTRIKWKEG 146          
The following BLAST results are available for this feature:
BLAST of CX292171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
TSYL4_MOUSE1.300e-1933.33Testis-specific Y-encoded-like protein 4 OS=Mus mu... [more]
TSYL5_MOUSE2.896e-1933.12Testis-specific Y-encoded-like protein 5 OS=Mus mu... [more]
TSYL5_HUMAN2.896e-1933.33Testis-specific Y-encoded-like protein 5 OS=Homo s... [more]
TSYL1_PONAB3.783e-1930.77Testis-specific Y-encoded-like protein 1 OS=Pongo ... [more]
TSYL1_MOUSE3.783e-1935.38Testis-specific Y-encoded-like protein 1 OS=Mus mu... [more]
TSYL1_HUMAN3.783e-1930.77Testis-specific Y-encoded-like protein 1 OS=Homo s... [more]
TSYL1_BOVIN1.437e-1832.59Testis-specific Y-encoded-like protein 1 OS=Bos ta... [more]
TSYL3_HUMAN7.134e-1827.17Testis-specific Y-encoded-like protein 3 OS=Homo s... [more]
TSPY1_RAT2.997e-1632.31Testis-specific Y-encoded protein 1 OS=Rattus norv... [more]
ASP_PLAFS3.914e-1633.33Aspartic acid-rich protein OS=Plasmodium falciparu... [more]

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Properties
Property NameValue
Genbank descriptionC04011D03SK FlavFr1 Citrus clementina cDNA clone C04011D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292171 ID=CX292171; Name=CX292171; organism=Citrus clementina; type=EST; length=703bp
TATCGTTCGGCCCAAGTAATTAGAAGATACCGCCCAATACCAAAATCCAA
GAGACCTAATCCCGACTTTAAACCACCAAACTACCCTTGACGCCGGACTT
GAGAATGACATCAATACCCTGATTTCATAGACGTGTAACGAGTCCATTGG
TTAACTACATAAACGTTTACAAAACTCCGACATAAGCTACCAAGAGCAAA
ATGGTGGCAGACAAGGGCAAAAAAACCAAAGTTGAAGAAGAAAACGCAGA
GCAAATTGACTCAGAACTTGTTCTTTCCATCGAGAAACTCCAAGAGATCC
AAGACGAGCTTGAAAAGATTAACGAAGAGGCAAGCGAGAAAGTCTTGGAG
GTTGAGCAGAAATACAGTGAGATACGCAAGCCAGTCTATGATAAGCGAAA
TGATATCATCAAATCCATACCTGACTTCTGGCTAACTGCCTTTATTAGTC
ATCCTGCTCTCGGTGAACTTTTGAGTGAAGAGGATCAGAAGATATTCAGG
TACTTGAGCTCTCTGGAAGTGGAGGATTTTAAAGATGTCAAATCAGGATA
CTCCATCACATTTAACTTCTCCCCCAATCCCTATTTTGAGGATACCAAAC
TTACCAAGACTTTCACCTTCCTTGATGATGATGGTTCAATGAAAATTACT
GCTACATCAATCAAATGGAAAGAGGGCATGGGCATACCAAATGGAGTTAA
TCA
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