CX292197
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292197 vs. ExPASy Swiss-Prot
Match: RER1_SCHPO (Protein rer1 OS=Schizosaccharomyces pombe GN=rer1 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.545e-27 Identity = 56/135 (41.48%), Postives = 82/135 (60.74%), Query Frame = 2 Query: 299 RMFQYYLDRSTPHPLQRWIGTLAAASIYLLRVYCVQGFYIVTYXXXXXXXXXXXXXXSPKIDPEFEA------LDGASLPTKGSDEFRPFIRRLPEFKFWYAITKAFCVAFLMTFFSIFDVPVFWPILLCYWIVL 685 R++++++DR+ P+ RW+ +++ +R+ V+G+YIV Y +PK DP E ++ LPT DEFRPFIRRLPEFKFWY+ +A A + +FF IFDVPVFWPIL+ Y++VL Sbjct: 20 RLYRHWVDRTIPYTTYRWLTVSGLIALFFIRILLVRGWYIVCYTLAIYLLNLFLAFLTPKFDPSVEQAMKDEEIEEGVLPTSKDDEFRPFIRRLPEFKFWYSSMRATLFALVASFFRIFDVPVFWPILVVYYLVL 154
BLAST of CX292197 vs. ExPASy Swiss-Prot
Match: RER1_SACPS (Protein RER1 OS=Saccharomyces pastorianus GN=RER1 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.458e-26 Identity = 61/152 (40.13%), Postives = 91/152 (59.87%), Query Frame = 2 Query: 248 DAASAVAPIAKWRSDFSRMFQYYLDRSTPHPLQRWIGTLAAASIYLLRVYCVQGFYIVTYXXXXXXXXXXXXXXSPKIDPEFEALDGASLPTKG--SDEFRPFIRRLPEFKFWYAITKAFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLT 697 + AS+ A IAK S ++Q+YLD+ TPH QRW ++++R+ +G+Y++ Y +PK D + + + G S+EFRPFIRRLPEFKFWY +A ++ +++ FSIFD+PVFWPILL Y+++LF LT Sbjct: 10 NGASSNALIAKMNSA-KLLYQHYLDKVTPHAKQRWAVLGGLLCLFMVRITMAEGWYVICYGLGLFLLNQFLAFLTPKFDMSLQQDEENNELEAGEKSEEFRPFIRRLPEFKFWYNSIRATVISLVLSLFSIFDIPVFWPILLMYFVLLFFLT 160
BLAST of CX292197 vs. ExPASy Swiss-Prot
Match: RER1_YEAST (Protein RER1 OS=Saccharomyces cerevisiae GN=RER1 PE=1 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 7.236e-26 Identity = 56/145 (38.62%), Postives = 85/145 (58.62%), Query Frame = 2 Query: 269 PIAKWRSDFSRMFQYYLDRSTPHPLQRWIGTLAAASIYLLRVYCVQGFYIVTYXXXXXXXXXXXXXXSPKIDPEFEALDGASLPTKG--SDEFRPFIRRLPEFKFWYAITKAFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLT 697 P+ + ++Q+YLD+ TPH +RW ++++R+ +G+Y++ Y +PK D + + + G S+EFRPFIRRLPEFKFWY +A ++ L++ FSIFD+PVFWPILL Y+I+LF LT Sbjct: 16 PLITKMNTMKLLYQHYLDKVTPHAKERWAVLGGLLCLFMVRITMAEGWYVICYGLGLFLLNQFLAFLTPKFDMSLQQDEENNELEAGEKSEEFRPFIRRLPEFKFWYNSIRATVISLLLSLFSIFDIPVFWPILLMYFILLFFLT 160
BLAST of CX292197 vs. ExPASy Swiss-Prot
Match: RER1_DICDI (Protein RER1 homolog OS=Dictyostelium discoideum GN=rer1 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.277e-22 Identity = 56/138 (40.58%), Postives = 79/138 (57.25%), Query Frame = 2 Query: 296 SRMFQYYLDRSTPHPLQRWIGTLAAASIYLLRVYCVQG-FYIVTYXXXXXXXXXXXXXXSPKIDPEFEALDGASLPT---KGSDEFRPFIRRLPEFKFWYAITKAFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLT 697 +R +Q ++++ QRW + +Y+LRV G +Y++TY SPK DPE E G SLPT + DE +PFIRRLPEF FW++I KA ++ TF D+PVFWPILL Y+I++F +T Sbjct: 23 ARKYQNLIEKTISFIPQRWAFVGFLSFLYILRVSLSSGGWYVITYALGIFLLTRFIAFLSPKWDPELEEDSGDSLPTTLNRNDDEAKPFIRRLPEFLFWHSIFKALFISIFCTFIPFLDLPVFWPILLLYFIIIFSVT 160 The following BLAST results are available for this feature:
BLAST of CX292197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292197 ID=CX292197; Name=CX292197; organism=Citrus clementina; type=EST; length=708bpback to top |