CX292198
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292198 vs. ExPASy Swiss-Prot
Match: TRXH_PICMA (Thioredoxin H-type OS=Picea mariana GN=SB09 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.332e-32 Identity = 58/105 (55.24%), Postives = 80/105 (76.19%), Query Frame = 2 Query: 170 EGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLQRIVGAKKDELQLAV 484 EG V +CH+ E W +LQ+ I K+L+ VDFTA+WC PC+++ P+ EL+KK P + FLKVDVDEL+ VA+EW VEAMPTF+ K+GK + ++VGAKKD+L+ V Sbjct: 3 EGNVFACHSTEGWRSKLQEAIDTKRLVAVDFTATWCGPCRVIGPVFVELSKKFPEIFFLKVDVDELRDVAQEWDVEAMPTFIFIKDGKAVDKVVGAKKDDLERKV 107
BLAST of CX292198 vs. ExPASy Swiss-Prot
Match: TRXH_ORYSJ (Thioredoxin H-type OS=Oryza sativa subsp. japonica GN=TRXH PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.671e-30 Identity = 58/110 (52.73%), Postives = 82/110 (74.55%), Query Frame = 2 Query: 164 AEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLQRIVGAKKDELQLAVEKH 493 AEEG VI+CH + ++ Q+ K A K++++DFTASWC PC+ ++P+ +E AKK P +FLKVDVDELK VAE++ VEAMPTF+ K+G ++VGA+KD+LQ + KH Sbjct: 3 AEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKH 112
BLAST of CX292198 vs. ExPASy Swiss-Prot
Match: TRXH_ORYSI (Thioredoxin H-type OS=Oryza sativa subsp. indica GN=TRXH PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.671e-30 Identity = 58/110 (52.73%), Postives = 82/110 (74.55%), Query Frame = 2 Query: 164 AEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLQRIVGAKKDELQLAVEKH 493 AEEG VI+CH + ++ Q+ K A K++++DFTASWC PC+ ++P+ +E AKK P +FLKVDVDELK VAE++ VEAMPTF+ K+G ++VGA+KD+LQ + KH Sbjct: 3 AEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKH 112
BLAST of CX292198 vs. ExPASy Swiss-Prot
Match: TRXH_BRAOL (Thioredoxin H-type OS=Brassica oleracea GN=BOPC17 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.847e-29 Identity = 60/110 (54.55%), Postives = 82/110 (74.55%), Query Frame = 2 Query: 173 GQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLQRIVGAKKDELQLAVEKHATV 502 G+VI+CHTVE WN +L+ + KLIV+DFTA WCPPC+ ++PI ELAKK V+F KVDVDEL +VA+E+ V+AMPTFV K + L ++VGA K+E++ + KH+ V Sbjct: 11 GEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVDVDELATVAQEFDVQAMPTFVYMKGEEKLDKVVGAAKEEIEAKLLKHSQV 120
BLAST of CX292198 vs. ExPASy Swiss-Prot
Match: TRXH1_BRANA (Thioredoxin H-type 1 OS=Brassica napus GN=THL-1 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.847e-29 Identity = 60/110 (54.55%), Postives = 82/110 (74.55%), Query Frame = 2 Query: 173 GQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLQRIVGAKKDELQLAVEKHATV 502 G+VI+CHTVE WN +L+ + KLIV+DFTA WCPPC+ ++PI ELAKK V+F KVDVDEL +VA+E+ V+AMPTFV K + L ++VGA K+E++ + KH+ V Sbjct: 11 GEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVDVDELATVAQEFDVQAMPTFVYMKGEEKLDKVVGAAKEEIEAKLLKHSQV 120
BLAST of CX292198 vs. ExPASy Swiss-Prot
Match: TRXH_BRARA (Thioredoxin H-type OS=Brassica rapa GN=PEC-2 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.413e-29 Identity = 60/110 (54.55%), Postives = 82/110 (74.55%), Query Frame = 2 Query: 173 GQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLQRIVGAKKDELQLAVEKHATV 502 G+VI+CHTVE WN +L+ + KLIV+DFTA WCPPC+ ++PI ELAKK V+F KVDVDEL +VA+E+ V+AMPTFV K + L ++VGA K+E++ + KH+ V Sbjct: 11 GEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVDVDELATVAKEFDVQAMPTFVYMKGEEKLDKVVGAAKEEIEAKLLKHSQV 120
BLAST of CX292198 vs. ExPASy Swiss-Prot
Match: TRXH2_ARATH (Thioredoxin H-type 2 OS=Arabidopsis thaliana GN=TRX2 PE=2 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 3.731e-22 Identity = 51/109 (46.79%), Postives = 72/109 (66.06%), Query Frame = 2 Query: 164 AEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLQRIVGAKKDELQLAVEK 490 +E +V+ + W + + KL+VVDF+ASWC PC+++ P + +A K V F+K+DVDEL VA+E+ V AMPTFVL K GK ++RI+GAKKDEL+ V K Sbjct: 22 SEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKVSK 130
BLAST of CX292198 vs. ExPASy Swiss-Prot
Match: TRXH_CHLRE (Thioredoxin H-type OS=Chlamydomonas reinhardtii GN=TRXH PE=1 SV=3) HSP 1 Score: 97.0561 bits (240), Expect = 1.016e-19 Identity = 51/109 (46.79%), Postives = 69/109 (63.30%), Query Frame = 2 Query: 173 GQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPA-VIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLQRIVGAKKDELQLAVEKHA 496 G VI + +W+ QL KG K IVVDFTA+WC PCK+++P+ L+ VIFLKVDVD + +VAE + AMPTF + K+G +VGA +D+L+ V KHA Sbjct: 3 GSVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTFHVYKDGVKADDLVGASQDKLKALVAKHA 111
BLAST of CX292198 vs. ExPASy Swiss-Prot
Match: TRXH9_ARATH (Thioredoxin H-type 9 OS=Arabidopsis thaliana GN=TRX9 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.123e-18 Identity = 43/104 (41.35%), Postives = 67/104 (64.42%), Query Frame = 2 Query: 173 GQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLQRIVGAKKDELQLAV 484 G V T ESW+++L + K++V +F+A+WC PCK+++P EL++K +++FL VDVDEL + W ++A PTF K G+ + ++VGA K ELQ V Sbjct: 23 GNVHLITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGANKPELQKKV 126
BLAST of CX292198 vs. ExPASy Swiss-Prot
Match: TRXH_POPJC (Thioredoxin H-type OS=Populus jackii PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.051e-17 Identity = 37/100 (37.00%), Postives = 63/100 (63.00%), Query Frame = 2 Query: 173 GQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLQRIVGAKKDEL 472 G V T E W+++L + K+++ +F+A WC PCK ++P EL++ P+++FL +DVDEL + W ++A PTF ++G+ + ++VGA K EL Sbjct: 24 GNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPCKQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEIKATPTFFFLRDGQQVDKLVGANKPEL 123 The following BLAST results are available for this feature:
BLAST of CX292198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX292198 ID=CX292198; Name=CX292198; organism=Citrus clementina; type=EST; length=713bpback to top |