CX292198
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292198 vs. ExPASy Swiss-Prot
Match: THIO_HELPY (Thioredoxin OS=Helicobacter pylori GN=trxA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.870e-11 Identity = 31/90 (34.44%), Postives = 58/90 (64.44%), Query Frame = 2 Query: 194 TVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPA-VIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLQRIVGAK 460 T E++ ++KG+A +VDF A WC PCK++SP++ ELA + KV+ DE + ++ ++ + ++PT + TK+G+V+ ++VG + Sbjct: 8 TEENFESTIKKGVA-----LVDFWAPWCGPCKMLSPVIDELASEYEGKAKICKVNTDEQEELSAKFGIRSIPTLLFTKDGEVVHQLVGVQ 92
BLAST of CX292198 vs. ExPASy Swiss-Prot
Match: THIO_HELPJ (Thioredoxin OS=Helicobacter pylori J99 GN=trxA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.870e-11 Identity = 31/90 (34.44%), Postives = 58/90 (64.44%), Query Frame = 2 Query: 194 TVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPA-VIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLQRIVGAK 460 T E++ ++KG+A +VDF A WC PCK++SP++ ELA + KV+ DE + ++ ++ + ++PT + TK+G+V+ ++VG + Sbjct: 8 TEENFESTIKKGVA-----LVDFWAPWCGPCKMLSPVIDELASEYEGKAKICKVNTDEQEELSAKFGIRSIPTLLFTKDGEVVHQLVGVQ 92
BLAST of CX292198 vs. ExPASy Swiss-Prot
Match: THIOM_RAT (Thioredoxin, mitochondrial OS=Rattus norvegicus GN=Txn2 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.601e-11 Identity = 34/83 (40.96%), Postives = 54/83 (65.06%), Query Frame = 2 Query: 248 IVVDFTASWCPPCKLMSPILSEL-AKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLQRIVGAK-KDELQLAVEK 490 +VVDF A WC PCK++ P L ++ AK+ V+ KVD+D+ +A E+ V A+PT + K G V+ + VG K +D+L+ ++K Sbjct: 81 VVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVLAIKNGDVVDKFVGIKDEDQLEAFLKK 163
BLAST of CX292198 vs. ExPASy Swiss-Prot
Match: THIOM_MOUSE (Thioredoxin, mitochondrial OS=Mus musculus GN=Txn2 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.601e-11 Identity = 34/83 (40.96%), Postives = 54/83 (65.06%), Query Frame = 2 Query: 248 IVVDFTASWCPPCKLMSPILSEL-AKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLQRIVGAK-KDELQLAVEK 490 +VVDF A WC PCK++ P L ++ AK+ V+ KVD+D+ +A E+ V A+PT + K G V+ + VG K +D+L+ ++K Sbjct: 81 VVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVLAIKNGDVVDKFVGIKDEDQLEAFLKK 163
BLAST of CX292198 vs. ExPASy Swiss-Prot
Match: THIOM_HUMAN (Thioredoxin, mitochondrial OS=Homo sapiens GN=TXN2 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.601e-11 Identity = 34/83 (40.96%), Postives = 54/83 (65.06%), Query Frame = 2 Query: 248 IVVDFTASWCPPCKLMSPILSEL-AKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLQRIVGAK-KDELQLAVEK 490 +VVDF A WC PCK++ P L ++ AK+ V+ KVD+D+ +A E+ V A+PT + K G V+ + VG K +D+L+ ++K Sbjct: 81 VVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVLAMKNGDVVDKFVGIKDEDQLEAFLKK 163
BLAST of CX292198 vs. ExPASy Swiss-Prot
Match: THIO_STAES (Thioredoxin OS=Staphylococcus epidermidis (strain ATCC 12228) GN=trxA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.621e-11 Identity = 35/102 (34.31%), Postives = 63/102 (61.76%), Query Frame = 2 Query: 194 TVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPA-VIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLQRIVGAK-KDELQLAVEKH 493 T ++ +++ G+ +VDF A+WC PCK+++P+L ELA LK+DVDE S A ++ V ++PT ++ K+G+ + ++VG + K+ L ++KH Sbjct: 7 TDSDFDSKIESGVK-----LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGEPVDKVVGFQPKENLAEVLDKH 103
BLAST of CX292198 vs. ExPASy Swiss-Prot
Match: THIO_STAEQ (Thioredoxin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=trxA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.621e-11 Identity = 35/102 (34.31%), Postives = 63/102 (61.76%), Query Frame = 2 Query: 194 TVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPA-VIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLQRIVGAK-KDELQLAVEKH 493 T ++ +++ G+ +VDF A+WC PCK+++P+L ELA LK+DVDE S A ++ V ++PT ++ K+G+ + ++VG + K+ L ++KH Sbjct: 7 TDSDFDSKIESGVK-----LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGEPVDKVVGFQPKENLAEVLDKH 103
BLAST of CX292198 vs. ExPASy Swiss-Prot
Match: THIO_STAAW (Thioredoxin OS=Staphylococcus aureus (strain MW2) GN=trxA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.621e-11 Identity = 33/83 (39.76%), Postives = 55/83 (66.27%), Query Frame = 2 Query: 251 VVDFTASWCPPCKLMSPILSELAKKLPA-VIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLQRIVGAK-KDELQLAVEKH 493 +VDF A+WC PCK+++P+L ELA LK+DVDE S A ++ V ++PT ++ K+G+ + ++VG + K+ L ++KH Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKH 103
BLAST of CX292198 vs. ExPASy Swiss-Prot
Match: THIO_STAAU (Thioredoxin OS=Staphylococcus aureus GN=trxA PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.621e-11 Identity = 33/83 (39.76%), Postives = 55/83 (66.27%), Query Frame = 2 Query: 251 VVDFTASWCPPCKLMSPILSELAKKLPA-VIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLQRIVGAK-KDELQLAVEKH 493 +VDF A+WC PCK+++P+L ELA LK+DVDE S A ++ V ++PT ++ K+G+ + ++VG + K+ L ++KH Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKH 103
BLAST of CX292198 vs. ExPASy Swiss-Prot
Match: THIO_STAAS (Thioredoxin OS=Staphylococcus aureus (strain MSSA476) GN=trxA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.621e-11 Identity = 33/83 (39.76%), Postives = 55/83 (66.27%), Query Frame = 2 Query: 251 VVDFTASWCPPCKLMSPILSELAKKLPA-VIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLQRIVGAK-KDELQLAVEKH 493 +VDF A+WC PCK+++P+L ELA LK+DVDE S A ++ V ++PT ++ K+G+ + ++VG + K+ L ++KH Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKH 103 The following BLAST results are available for this feature:
BLAST of CX292198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292198 ID=CX292198; Name=CX292198; organism=Citrus clementina; type=EST; length=713bpback to top |