CX292208

Overview
NameCX292208
Unique NameCX292208
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292208 vs. ExPASy Swiss-Prot
Match: PGK_MICAN (Phosphoglycerate kinase OS=Microcystis aeruginosa (strain NIES-843) GN=pgk PE=3 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 2.928e-67
Identity = 134/210 (63.81%), Postives = 162/210 (77.14%), Query Frame = 1
Query:   85 KKSVSVLKEADLKGKRVFVRVDLNVPLDDNLN-ITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIE 708
            KK+V+ L EADL GKRV VRVD NVP+D     I+DD R+RAA+PTI+ L+  GAKVIL SH+GRP G V     L P+  RLSELLG EV M  DCIGE V   ++++  G V LLEN+RFH EEE NDP+FAKKLA+ ADLYVNDAFG+AHRAHASTEGV  +L PSVAG+L++KEL+YL  A+  P++P AAI+GGSKVS+KIGVIE
Sbjct:    3 KKTVANLTEADLAGKRVLVRVDFNVPMDKATGAISDDTRIRAALPTIEDLIKKGAKVILCSHMGRPDGQVKENLRLTPVAKRLSELLGQEVIMCPDCIGEGVTAAISQMSNGQVALLENLRFHGEEEANDPDFAKKLAANADLYVNDAFGTAHRAHASTEGVTHYLSPSVAGYLIEKELNYLQAAIETPQRPLAAIIGGSKVSSKIGVIE 212          
BLAST of CX292208 vs. ExPASy Swiss-Prot
Match: PGK_SYNE7 (Phosphoglycerate kinase OS=Synechococcus elongatus (strain PCC 7942) GN=pgk PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 3.824e-67
Identity = 133/210 (63.33%), Postives = 156/210 (74.29%), Query Frame = 1
Query:   82 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGV-TPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIE 708
            +K++++ L  ADL+GKRV VRVD NVPLD N  ITDD R+RAA+PTI+YL   GAKVIL SH GRPKG       L P+  RLSELLG  V    D +G   E  VA    G V+LLENVRFH EEE ND EFAK LASLAD+YVNDAFG+AHRAHAST GV ++L P VAG+L++KEL YL  A+ NP++P AAIVGGSKVS+KIGVIE
Sbjct:    2 SKRTLASLTAADLEGKRVLVRVDFNVPLDGNGKITDDTRIRAALPTIRYLSESGAKVILVSHFGRPKGKPVESMRLTPVAERLSELLGRPVVKTTDAVGAGAEAQVAATSNGQVVLLENVRFHAEEEANDAEFAKALASLADIYVNDAFGAAHRAHASTAGVTEYLSPCVAGYLLEKELQYLQAAIDNPQRPLAAIVGGSKVSSKIGVIE 211          
BLAST of CX292208 vs. ExPASy Swiss-Prot
Match: PGK_PROM4 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9211) GN=pgk PE=3 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 8.518e-67
Identity = 130/210 (61.90%), Postives = 162/210 (77.14%), Query Frame = 1
Query:   82 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIE 708
            AK+S+S L   +L GKRVFVRVD NVP++   +ITDD R+RAA+PTIK L+  GA+VILS+H GRPKG V     L P+  RLSELLG  V   + CIG + +     +  G V+LLENVRF + EEKNDP+FAK+L+ LA++YVNDAFG+AHRAHASTEGV KFL P+VAG+LM+KEL YL GA+ +PK+P AAIVGGSKVS+KIGV+E
Sbjct:    2 AKRSLSSLSAEELCGKRVFVRVDFNVPVNAEGDITDDTRIRAALPTIKDLIDKGARVILSAHFGRPKGQVNDAMRLTPVAQRLSELLGHTVIKTDSCIGSDAQAKAQSLNNGDVMLLENVRFIQGEEKNDPDFAKELSELAEVYVNDAFGAAHRAHASTEGVTKFLSPNVAGYLMEKELQYLQGAIDSPKRPLAAIVGGSKVSSKIGVLE 211          
BLAST of CX292208 vs. ExPASy Swiss-Prot
Match: PGK_SYNP6 (Phosphoglycerate kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=pgk PE=3 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.453e-66
Identity = 132/210 (62.86%), Postives = 155/210 (73.81%), Query Frame = 1
Query:   82 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGV-TPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIE 708
            +K++++ L  ADL+GKRV VRVD NVPLD N  ITDD R+RAA+PTI+YL   GAKVIL SH GRPKG       L P+  RLSELLG  V    D +G   E  VA    G V+LLENVRFH EEE ND EFAK LASLAD+YVNDAFG+AHRAHA T GV ++L P VAG+L++KEL YL  A+ NP++P AAIVGGSKVS+KIGVIE
Sbjct:    2 SKRTLASLTAADLEGKRVLVRVDFNVPLDGNGKITDDTRIRAALPTIRYLSESGAKVILVSHFGRPKGKPVESMRLTPVAERLSELLGRPVVKTTDAVGAGAEAQVAATSNGQVVLLENVRFHAEEEANDAEFAKALASLADIYVNDAFGAAHRAHAPTAGVTEYLSPCVAGYLLEKELQYLQAAIDNPQRPLAAIVGGSKVSSKIGVIE 211          
BLAST of CX292208 vs. ExPASy Swiss-Prot
Match: PGK_ACIBL (Phosphoglycerate kinase OS=Acidobacteria bacterium (strain Ellin345) GN=pgk PE=3 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 2.478e-66
Identity = 128/209 (61.24%), Postives = 156/209 (74.64%), Query Frame = 1
Query:  103 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGV-TPKYSLKPLVPRLSELL------GVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIE 708
            +K+  L  KRVF+RVD NVPLD+N  +TDD R+R  +PTI+Y + HGAK+IL SHLGRPKG   PK SLKP+  RL  +L      G  V  + DCIG + ++M  ++ +G  LLLENVRFH EEEKNDP FAK+LASL +LYVNDAFGSAHRAHASTEG+  +++ S AG LMQKELDYL  A SNP KPF AI+GG+KVS KIGVI+
Sbjct:    6 IKDLQLSNKRVFMRVDFNVPLDENGRVTDDTRIRETLPTIEYALRHGAKLILCSHLGRPKGKPNPKMSLKPVAERLRVMLDHAISPGQNVGFSPDCIGMQAQEMAKQLEKGQALLLENVRFHAEEEKNDPAFAKELASLCELYVNDAFGSAHRAHASTEGITHYVEKSAAGLLMQKELDYLGKATSNPAKPFVAILGGAKVSDKIGVIQ 214          
BLAST of CX292208 vs. ExPASy Swiss-Prot
Match: PGK_SYNJA (Phosphoglycerate kinase OS=Synechococcus sp. (strain JA-3-3Ab) GN=pgk PE=3 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 5.521e-66
Identity = 131/208 (62.98%), Postives = 156/208 (75.00%), Query Frame = 1
Query:  115 DLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRP----------KGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIE 708
            DLKGKRV VR D NVPLD   NITDD R+RA++PTI+ L   GAKVIL+SHLGRP          +      SL P+  RL++LLG  V  A DCIG E E +V+ +  G V LLENVRFH EEE NDPEFA+KLASLADL+VNDAFGSAHRAHAST GV  +L+P+VAG+L++KEL +L GA+ NP++P AAI+GGSKVSTKIGVIE
Sbjct:   15 DLKGKRVLVRADFNVPLDPQGNITDDTRIRASLPTIQALAQAGAKVILTSHLGRPIQKDKATGAIQIAREGNSLAPVAVRLAQLLGQPVAFAPDCIGPEAEAVVSSLENGQVALLENVRFHPEEEANDPEFARKLASLADLFVNDAFGSAHRAHASTAGVTAYLQPAVAGYLVEKELQFLSGAIENPQRPLAAIIGGSKVSTKIGVIE 222          
BLAST of CX292208 vs. ExPASy Swiss-Prot
Match: PGK_BACP2 (Phosphoglycerate kinase OS=Bacillus pumilus (strain SAFR-032) GN=pgk PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.098e-65
Identity = 129/209 (61.72%), Postives = 163/209 (77.99%), Query Frame = 1
Query:   85 KKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIE 708
            KKSV   K+ D+KGK VF RVD NVP+ D   +TDD R+RAA+PTI+YL G GAKV+L+SHLGRPKG VT +  L P+  RL ELLG EVK A++  G+ V+K ++++ +G VL+LENVRF+  EEKNDPE +K  A LAD+YVNDAFG+AHRAHAST G+A +L P+V+GFLMQKEL+ L  A+SNP +PF AI+GG+KV  KIGVIE
Sbjct:    3 KKSV---KDIDVKGKVVFCRVDFNVPMKDG-KVTDDTRIRAALPTIEYLTGQGAKVLLASHLGRPKGQVTEELRLTPVAKRLQELLGQEVKKADEAYGDNVKKQISDLKDGDVLVLENVRFYPGEEKNDPELSKAFADLADVYVNDAFGAAHRAHASTAGIAAYL-PAVSGFLMQKELEVLGKAISNPDRPFTAIIGGAKVKDKIGVIE 206          
BLAST of CX292208 vs. ExPASy Swiss-Prot
Match: PGK_PROM1 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain NATL1A) GN=pgk PE=3 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.041e-64
Identity = 132/210 (62.86%), Postives = 153/210 (72.86%), Query Frame = 1
Query:   82 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIE 708
            +K+S+S L   DL GKRV VRVD NVPL D   ITDD R+RAA+PTI  L+   A+VILS+H GRPKG V     L  +  RLSELLG  V     CIG E +  V  +  G V+LLENVRF   EEKND EFAK+LASLA++YVNDAFG+AHRAHASTEGV KFL P VAG+LM+KEL YL GA+  PK P AAIVGGSKVS+KIGV+E
Sbjct:    2 SKRSLSSLGAEDLCGKRVLVRVDFNVPLGDEGQITDDTRIRAALPTINDLLDKSARVILSAHFGRPKGEVNETMRLTAVAQRLSELLGKTVVKTESCIGAEAKSKVDAMSNGDVVLLENVRFISGEEKNDTEFAKELASLAEVYVNDAFGAAHRAHASTEGVTKFLSPCVAGYLMEKELKYLQGAIDQPKSPLAAIVGGSKVSSKIGVLE 211          
BLAST of CX292208 vs. ExPASy Swiss-Prot
Match: PGK_SYNJB (Phosphoglycerate kinase OS=Synechococcus sp. GN=pgk PE=3 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.360e-64
Identity = 129/208 (62.02%), Postives = 154/208 (74.04%), Query Frame = 1
Query:  115 DLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRP----------KGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIE 708
            DL GKRV VR D NVPLD   NITDD R+RAA+PT++ L   GAKVIL+SHLGRP          K      SL P+  RLS+LLG  V  A DCIG E E +V  +  G V LLENVRF+ EEE NDPEFA+KLASLADL+VNDAFGSAHRAHAST GV  +L+P+VAG+L+++EL +L GA+ +P++P AAI+GGSKVSTKIGVIE
Sbjct:   15 DLAGKRVLVRADFNVPLDAQGNITDDTRIRAALPTVQALTQAGAKVILTSHLGRPVKKDKETGAVKVAREGNSLAPVATRLSQLLGQPVAFAPDCIGPEAEAVVNRLENGQVALLENVRFYPEEEDNDPEFARKLASLADLFVNDAFGSAHRAHASTAGVTAYLQPAVAGYLVERELQFLSGAIEDPRRPLAAIIGGSKVSTKIGVIE 222          
BLAST of CX292208 vs. ExPASy Swiss-Prot
Match: PGK_BACSU (Phosphoglycerate kinase OS=Bacillus subtilis GN=pgk PE=1 SV=3)

HSP 1 Score: 244.202 bits (622), Expect = 5.168e-64
Identity = 127/203 (62.56%), Postives = 157/203 (77.34%), Query Frame = 1
Query:  103 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIE 708
            LK+ D+KGK VF RVD NVP+ D   +TDD R+RAA+PTIK+L   GAKV+L+SHLGRPKG V  +  L P+  RL ELLG EVK A++  G+ V+  ++E+ +G VL+LENVRF+  EEKNDPE AK  A LAD+YVNDAFG+AHRAHAST G+A+ L P+VAGFLM+KELD L  AVSNP +PF AI+GG+KV  KIGVIE
Sbjct:    6 LKDIDVKGKVVFCRVDFNVPMKDG-EVTDDTRIRAALPTIKHLADQGAKVLLASHLGRPKGEVVEELRLTPVAARLGELLGKEVKKADEAYGDAVKAQISEMKDGDVLVLENVRFYPGEEKNDPELAKAFAELADVYVNDAFGAAHRAHASTAGIAEHL-PAVAGFLMEKELDVLGKAVSNPDRPFTAIIGGAKVKDKIGVIE 206          
The following BLAST results are available for this feature:
BLAST of CX292208 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_MICAN2.928e-6763.81Phosphoglycerate kinase OS=Microcystis aeruginosa ... [more]
PGK_SYNE73.824e-6763.33Phosphoglycerate kinase OS=Synechococcus elongatus... [more]
PGK_PROM48.518e-6761.90Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_SYNP61.453e-6662.86Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_ACIBL2.478e-6661.24Phosphoglycerate kinase OS=Acidobacteria bacterium... [more]
PGK_SYNJA5.521e-6662.98Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_BACP22.098e-6561.72Phosphoglycerate kinase OS=Bacillus pumilus (strai... [more]
PGK_PROM11.041e-6462.86Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_SYNJB1.360e-6462.02Phosphoglycerate kinase OS=Synechococcus sp. GN=pg... [more]
PGK_BACSU5.168e-6462.56Phosphoglycerate kinase OS=Bacillus subtilis GN=pg... [more]

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Properties
Property NameValue
Genbank descriptionC04011G05SK FlavFr1 Citrus clementina cDNA clone C04011G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292208 ID=CX292208; Name=CX292208; organism=Citrus clementina; type=EST; length=709bp
AATCTTCGATCTCATTCCAAAATCTAACCAAAACCCTTTCTCGATTTCTC
TGATCTCGTGTTTGATCGAATCAAAATGGCCGCCAAGAAGAGTGTAAGCG
TTCTAAAAGAAGCTGATTTGAAGGGAAAGAGAGTGTTCGTACGAGTGGAT
CTGAACGTGCCGTTGGATGACAACTTGAATATCACCGATGACAACAGAGT
CCGTGCTGCTGTTCCCACTATCAAATACCTGATGGGTCATGGCGCCAAAG
TCATTCTCTCCAGTCACTTGGGGCGTCCAAAGGGTGTTACACCCAAGTAC
AGCTTGAAACCTCTTGTGCCAAGGCTTTCTGAACTTCTTGGAGTTGAGGT
TAAAATGGCAAACGACTGCATTGGTGAAGAAGTTGAAAAAATGGTGGCTG
AAATTCCCGAAGGGGGCGTCTTGCTCCTCGAAAATGTGAGGTTCCATAAG
GAGGAAGAGAAGAATGACCCAGAGTTTGCTAAGAAGCTAGCTTCTCTTGC
AGATCTCTATGTTAATGATGCATTCGGATCTGCCCATAGAGCCCATGCTT
CCACTGAGGGTGTGGCTAAGTTCTTGAAGCCTTCTGTGGCTGGTTTCCTT
ATGCAAAAGGAACTAGATTATCTTGTTGGAGCTGTTTCAAATCCCAAGAA
ACCATTTGCTGCCATTGTTGGTGGTTCAAAGGTGTCAACTAAGATCGGTG
TTATTGAAT
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