CX292208

Overview
NameCX292208
Unique NameCX292208
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292208 vs. ExPASy Swiss-Prot
Match: PGK_BACCN (Phosphoglycerate kinase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=pgk PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.375e-63
Identity = 127/208 (61.06%), Postives = 162/208 (77.88%), Query Frame = 1
Query:   85 KKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVI 705
            KKS+   ++ DLKGKRVF RVD NVP+ D   ITD+ R+RAA+PTI+YL+  GAKVIL+SHLGRPKG V  +  L P+  RL ELLG +VK A++  G  V++MVA + EG +L+LENVRF+  EEKND E AK+ A+LAD++VNDAFG+AHRAHAST G+A +L P+VAGFLM+KEL+ L  A+SNP +PF AI+GG+KV  KIGVI
Sbjct:    3 KKSI---RDVDLKGKRVFCRVDFNVPMKDG-KITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQVVEEMRLTPVAVRLGELLGKDVKKADEAFGPAVQEMVAAMNEGDILVLENVRFYAGEEKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVAGFLMEKELEVLGKALSNPDRPFTAIIGGAKVKDKIGVI 205          
BLAST of CX292208 vs. ExPASy Swiss-Prot
Match: PGK_PELTS (Phosphoglycerate kinase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=pgk PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 5.714e-63
Identity = 126/209 (60.29%), Postives = 163/209 (77.99%), Query Frame = 1
Query:   82 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVI 705
            AKK+V   ++ D+KGKRV +RVD NVP++ N  + DD +++ AVPTI YL+G  A+VIL SHLGRPKG V  +Y + P+  RLSELLG  V  A DC+GE     VA++ +G V+LLENVRFH EEEKND +FA++LA LAD++VNDAFG+AHRAHASTEGVA FL P+VAG LM+KEL+ L   +++P++PFAA+VGGSKVS K+GVI
Sbjct:    2 AKKTV---RDIDVKGKRVLLRVDFNVPME-NGRVADDVKIKEAVPTINYLIGQKARVILVSHLGRPKGRVDERYKMDPVARRLSELLGKTVVKAGDCVGEAARSAVAQMQDGDVVLLENVRFHPEEEKNDEKFARQLAELADVFVNDAFGTAHRAHASTEGVAGFL-PAVAGLLMEKELEILGRLLTSPERPFAAVVGGSKVSDKLGVI 205          
BLAST of CX292208 vs. ExPASy Swiss-Prot
Match: PGK_ANAD2 (Phosphoglycerate kinase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=pgk PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 5.714e-63
Identity = 121/201 (60.20%), Postives = 159/201 (79.10%), Query Frame = 1
Query:  115 DLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTP---KYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIE 708
            +L GKRVF+RVD NVPLD    +TDD R+RAA+PTI++ +   AKVIL+SHLGRPKG      K +L+P   RLSELL  +V +A+DC+G+ V+K+V ++ +G VLLLEN+RFH EEEKND  FA++LASLAD++VNDAFG+AHRAHAST G+A+F+K   AGFL+QKE++YL  A+ +P +PF AIVGG+KVS KI V+E
Sbjct:   10 ELAGKRVFIRVDFNVPLDPQGRVTDDARIRAALPTIRHAIQAKAKVILASHLGRPKGKPEDRQKLTLEPAAVRLSELLSQDVILADDCVGDGVKKLVRDLKDGHVLLLENLRFHPEEEKNDEAFARELASLADVWVNDAFGTAHRAHASTAGMARFVKEKAAGFLVQKEVEYLGKALGSPARPFVAIVGGAKVSDKIKVLE 210          
BLAST of CX292208 vs. ExPASy Swiss-Prot
Match: PGK_MOOTA (Phosphoglycerate kinase OS=Moorella thermoacetica (strain ATCC 39073) GN=pgk PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 7.462e-63
Identity = 124/202 (61.39%), Postives = 156/202 (77.23%), Query Frame = 1
Query:  103 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVI 705
            LK+ +L  KRV VRVD NVPL+    +TD+ R+RAA+PTI+YL+ HGA+VIL SHLGRPKG V  +  L P+   L  LLG +V   NDC+G EVE   A +  G VLLLEN+RFH EEEKNDP FA++LASLAD+YVNDAFG+AHRAHASTEGVA +L P+ AGFL+QKE++ L  A+++P++PF AI+GG+KVS KI VI
Sbjct:    6 LKDLELNNKRVLVRVDFNVPLEAG-RVTDNTRIRAALPTIEYLLDHGARVILMSHLGRPKGKVKEELRLDPVARELESLLGRQVHKVNDCVGPEVEAAAAALKPGEVLLLENLRFHPEEEKNDPGFARQLASLADVYVNDAFGAAHRAHASTEGVAHYL-PAAAGFLLQKEIETLGKALADPERPFVAIIGGAKVSDKISVI 205          
BLAST of CX292208 vs. ExPASy Swiss-Prot
Match: PGK_ANOFW (Phosphoglycerate kinase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=pgk PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 7.462e-63
Identity = 125/203 (61.58%), Postives = 157/203 (77.34%), Query Frame = 1
Query:  103 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIE 708
            +++ D+KGKRVF RVD NVP+ + + +TDD R+RAA+PTI+YLM  GAKVIL+SHLGRPKG V  +  L  +  RLSELLG  V   ++  G+ V+  +AE+ EG VLLLENVRF+  EEKNDPE AK  A LAD+YVNDAFG+AHRAHASTEG+A  L P+VAGFLM+KE++ L  A+SNP +PF AI+GG+KV  KIGVIE
Sbjct:    6 VRDIDVKGKRVFCRVDFNVPMQNGV-VTDDTRIRAALPTIQYLMEQGAKVILASHLGRPKGKVVEEMRLNAVAERLSELLGKRVVKTDEAYGDTVKAAIAEMNEGDVLLLENVRFYPGEEKNDPELAKAFAELADVYVNDAFGAAHRAHASTEGIAHHL-PAVAGFLMEKEIEVLGKALSNPDRPFTAIIGGAKVKDKIGVIE 206          
BLAST of CX292208 vs. ExPASy Swiss-Prot
Match: PGK_THESQ (Phosphoglycerate kinase OS=Thermotoga sp. (strain RQ2) GN=pgk PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 9.746e-63
Identity = 123/202 (60.89%), Postives = 155/202 (76.73%), Query Frame = 1
Query:  103 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGV-TPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVI 705
            +++ DLKGKRV +RVD NVP+ D + + DD R+RAA+PTIKY +  GAKVI  SHLGRPKG  +P++SL P+  RLSELLG EVK     +G+EV+K V E+ EG VLLLEN RFH  E KNDPE AK  ASLAD++VNDAFG+AHRAHAS  G+A+F+ PSVAGFLM+KE+ +L     NP+KP+  ++GG+KVS KIGVI
Sbjct:    6 IRDVDLKGKRVIMRVDFNVPVKDGV-VQDDTRIRAALPTIKYALEQGAKVIFLSHLGRPKGEPSPEFSLAPVAKRLSELLGKEVKFVPAVVGDEVKKAVEELKEGEVLLLENTRFHPGETKNDPELAKFWASLADIHVNDAFGTAHRAHASNVGIAQFI-PSVAGFLMEKEIKFLSKVTYNPEKPYVVVLGGAKVSDKIGVI 205          
BLAST of CX292208 vs. ExPASy Swiss-Prot
Match: PGK_GEOKA (Phosphoglycerate kinase OS=Geobacillus kaustophilus GN=pgk PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.273e-62
Identity = 124/203 (61.08%), Postives = 156/203 (76.85%), Query Frame = 1
Query:  103 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIE 708
            +++ +++GKRVF RVD NVP++    ITDD R+RAA+PTI+YL+ HGAKVIL+SHLGRPKG V  +  L  +  RL ELL   V   N+ +G+EV+  V  + EG VLLLENVRF+  EEKNDPE AK  A LADLYVNDAFG+AHRAHASTEG+A +L P+VAGFLM+KEL+ L  A+SNP +PF AI+GG+KV  KIGVI+
Sbjct:    6 IRDVEVRGKRVFCRVDFNVPMEQGA-ITDDTRIRAALPTIRYLIEHGAKVILASHLGRPKGKVVEELRLDAVAKRLGELLERPVAKTNEAVGDEVKAAVDRLNEGDVLLLENVRFYPGEEKNDPELAKAFAELADLYVNDAFGAAHRAHASTEGIAHYL-PAVAGFLMEKELEVLGKALSNPDRPFTAIIGGAKVKDKIGVID 206          
BLAST of CX292208 vs. ExPASy Swiss-Prot
Match: PGK_CHLP8 (Phosphoglycerate kinase OS=Chlorobaculum parvum (strain NCIB 8327) GN=pgk PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.662e-62
Identity = 116/203 (57.14%), Postives = 158/203 (77.83%), Query Frame = 1
Query:  103 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIE 708
            L +  L+GKRV +RVD NVPLD + NITDD R+  A+P+I+ ++  G ++IL SHLGRPKG V P +SL P   RLSELLG+ V MANDCIG EV + V  + +G V++LEN+RFH EEE NDP+FA++LAS+ ++YVNDAFG+AHRAHASTEG+  ++  +VAG+L++KEL YL  A+++ K+PF AI+GG+K+S KI V+E
Sbjct:    6 LSDISLQGKRVLMRVDFNVPLDQDRNITDDKRIVGALPSIRKVIEEGGRLILMSHLGRPKGKVNPAFSLAPAAKRLSELLGMPVTMANDCIGTEVMQEVLALQDGEVMMLENLRFHPEEEANDPDFARELASMGEIYVNDAFGTAHRAHASTEGITHYVPTAVAGYLIEKELRYLGTALNDAKRPFVAILGGAKISGKIDVLE 208          
BLAST of CX292208 vs. ExPASy Swiss-Prot
Match: PGK_BREBN (Phosphoglycerate kinase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=pgk PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.662e-62
Identity = 124/209 (59.33%), Postives = 158/209 (75.60%), Query Frame = 1
Query:   85 KKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIE 708
            KKS+   ++ +L GKRVF RVD NVP+ D + ITDD R+RAAVPTI+++M  GAKVIL+SH GRPKG V  +  L P+   LS LLG +V+   DC G +VE  V  +  G V+LLENVRFH  EEKNDPE AK  A+LADL+VNDAFG+AHRAHAST G+A+++ P+VAG LM+KE+ ++ GA+SNP++PF AIVGG+KV  KI VIE
Sbjct:    3 KKSI---RDVELAGKRVFCRVDFNVPMQDGV-ITDDTRIRAAVPTIRFMMEAGAKVILASHFGRPKGQVVEEMRLTPVAAHLSSLLGKDVRKLEDCQGADVEAAVERMESGDVILLENVRFHAGEEKNDPELAKSFAALADLFVNDAFGTAHRAHASTAGIAEYI-PAVAGLLMEKEIRFMGGALSNPERPFTAIVGGAKVKDKIAVIE 206          
BLAST of CX292208 vs. ExPASy Swiss-Prot
Match: PGK_BACLD (Phosphoglycerate kinase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=pgk PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.662e-62
Identity = 124/209 (59.33%), Postives = 162/209 (77.51%), Query Frame = 1
Query:   85 KKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIE 708
            KKSV   K+ D+KG+ VF RVD NVP+ D   +TDD R+RAA+PTI+YL   GAKV+L+SHLGRPKG V+ +  L P+  RL EL+G EVK A++  G+ V+  ++E+ +G +L+LENVRF+  EEKNDPE +K  A LAD+YVNDAFG+AHRAHAST G+A+ L P+VAGFLM+KEL+ L  A+SNP++PF AI+GG+KV  KIGVIE
Sbjct:    3 KKSV---KDIDVKGRVVFCRVDFNVPMKDG-KVTDDTRIRAALPTIQYLTEQGAKVLLASHLGRPKGQVSEELRLTPVAARLGELIGKEVKKADEAYGDAVKAQISEMKDGDILVLENVRFYPGEEKNDPELSKAFADLADVYVNDAFGAAHRAHASTAGIAEHL-PAVAGFLMEKELEVLGKALSNPERPFTAIIGGAKVKDKIGVIE 206          
The following BLAST results are available for this feature:
BLAST of CX292208 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_BACCN4.375e-6361.06Phosphoglycerate kinase OS=Bacillus cereus subsp. ... [more]
PGK_PELTS5.714e-6360.29Phosphoglycerate kinase OS=Pelotomaculum thermopro... [more]
PGK_ANAD25.714e-6360.20Phosphoglycerate kinase OS=Anaeromyxobacter dehalo... [more]
PGK_MOOTA7.462e-6361.39Phosphoglycerate kinase OS=Moorella thermoacetica ... [more]
PGK_ANOFW7.462e-6361.58Phosphoglycerate kinase OS=Anoxybacillus flavither... [more]
PGK_THESQ9.746e-6360.89Phosphoglycerate kinase OS=Thermotoga sp. (strain ... [more]
PGK_GEOKA1.273e-6261.08Phosphoglycerate kinase OS=Geobacillus kaustophilu... [more]
PGK_CHLP81.662e-6257.14Phosphoglycerate kinase OS=Chlorobaculum parvum (s... [more]
PGK_BREBN1.662e-6259.33Phosphoglycerate kinase OS=Brevibacillus brevis (s... [more]
PGK_BACLD1.662e-6259.33Phosphoglycerate kinase OS=Bacillus licheniformis ... [more]

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Properties
Property NameValue
Genbank descriptionC04011G05SK FlavFr1 Citrus clementina cDNA clone C04011G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292208 ID=CX292208; Name=CX292208; organism=Citrus clementina; type=EST; length=709bp
AATCTTCGATCTCATTCCAAAATCTAACCAAAACCCTTTCTCGATTTCTC
TGATCTCGTGTTTGATCGAATCAAAATGGCCGCCAAGAAGAGTGTAAGCG
TTCTAAAAGAAGCTGATTTGAAGGGAAAGAGAGTGTTCGTACGAGTGGAT
CTGAACGTGCCGTTGGATGACAACTTGAATATCACCGATGACAACAGAGT
CCGTGCTGCTGTTCCCACTATCAAATACCTGATGGGTCATGGCGCCAAAG
TCATTCTCTCCAGTCACTTGGGGCGTCCAAAGGGTGTTACACCCAAGTAC
AGCTTGAAACCTCTTGTGCCAAGGCTTTCTGAACTTCTTGGAGTTGAGGT
TAAAATGGCAAACGACTGCATTGGTGAAGAAGTTGAAAAAATGGTGGCTG
AAATTCCCGAAGGGGGCGTCTTGCTCCTCGAAAATGTGAGGTTCCATAAG
GAGGAAGAGAAGAATGACCCAGAGTTTGCTAAGAAGCTAGCTTCTCTTGC
AGATCTCTATGTTAATGATGCATTCGGATCTGCCCATAGAGCCCATGCTT
CCACTGAGGGTGTGGCTAAGTTCTTGAAGCCTTCTGTGGCTGGTTTCCTT
ATGCAAAAGGAACTAGATTATCTTGTTGGAGCTGTTTCAAATCCCAAGAA
ACCATTTGCTGCCATTGTTGGTGGTTCAAAGGTGTCAACTAAGATCGGTG
TTATTGAAT
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