CX292443

Overview
NameCX292443
Unique NameCX292443
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length542
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292443 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 2.918e-19
Identity = 46/99 (46.46%), Postives = 67/99 (67.68%), Query Frame = 3
Query:  198 FTYAELELATNRFSEANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGKRLLVYEYICNGSLDSHLY 494
            F +  +E ATN F   N L +GGFG V++G L  G  VAVK+    S QG++EF +EV V++  QHRN+V L+G+C+E  +++LVYE++ N SLD  L+
Sbjct:  314 FDFKAIEAATNCFLPINKLGQGGFGEVYKGTLSSGLQVAVKRLSKTSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDHFLF 412          
BLAST of CX292443 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 2.918e-19
Identity = 48/99 (48.48%), Postives = 69/99 (69.70%), Query Frame = 3
Query:  198 FTYAELELATNRFSEANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGKRLLVYEYICNGSLDSHLY 494
            F +  +E ATN+FSE+N +  GGFG V  GVL +G  VA+K+   AS QG +EF +EV V++   HRN+V L+GFC+E  +++LVYE++ N SLD  L+
Sbjct:  325 FDFKAIEDATNKFSESNIIGRGGFGEVFMGVL-NGTEVAIKRLSKASRQGAREFKNEVVVVAKLHHRNLVKLLGFCLEGEEKILVYEFVPNKSLDYFLF 422          
BLAST of CX292443 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.918e-19
Identity = 48/108 (44.44%), Postives = 69/108 (63.89%), Query Frame = 3
Query:  177 FGNPPRWFTYAELELATNRFSEANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGKRLLVYEYICNGSLDSHLYGK 500
            F  P R  T+A+L  ATN F   + +  GGFG V++  L DG VVA+K+    S QGD+EF +E+E +   +HRN+V L+G+C    +RLLVYEY+  GSL+  L+ +
Sbjct:  869 FEKPLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDR 976          
BLAST of CX292443 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.918e-19
Identity = 48/108 (44.44%), Postives = 69/108 (63.89%), Query Frame = 3
Query:  177 FGNPPRWFTYAELELATNRFSEANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGKRLLVYEYICNGSLDSHLYGK 500
            F  P R  T+A+L  ATN F   + +  GGFG V++  L DG VVA+K+    S QGD+EF +E+E +   +HRN+V L+G+C    +RLLVYEY+  GSL+  L+ +
Sbjct:  869 FEKPLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDR 976          
BLAST of CX292443 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.811e-19
Identity = 45/99 (45.45%), Postives = 66/99 (66.67%), Query Frame = 3
Query:  198 FTYAELELATNRFSEANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGKRLLVYEYICNGSLDSHLY 494
            F +  +  ATN F   N L +GGFG V++G  P G  VAVK+    S QG++EF +EV V++  QHRN+V L+G+C+E  +++LVYE++ N SLD  L+
Sbjct:  496 FDFKAIVAATNNFLPINKLGQGGFGEVYKGTFPSGVQVAVKRLSKTSGQGEREFENEVVVVAKLQHRNLVRLLGYCLEGEEKILVYEFVHNKSLDYFLF 594          
BLAST of CX292443 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.811e-19
Identity = 49/108 (45.37%), Postives = 69/108 (63.89%), Query Frame = 3
Query:  177 FGNPPRWFTYAELELATNRFSEANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGKRLLVYEYICNGSLDSHLYGK 500
            F  P R  T+A L  ATN FS    +  GGFG V++  L DG VVA+K+    + QGD+EF +E+E +   +HRN+V L+G+C    +RLLVYEY+  GSL++ L+ K
Sbjct:  840 FEKPLRKLTFAHLLEATNGFSAETMVGSGGFGEVYKAQLRDGSVVAIKKLIRITGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKWGSLETVLHEK 947          
BLAST of CX292443 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.811e-19
Identity = 46/106 (43.40%), Postives = 68/106 (64.15%), Query Frame = 3
Query:  177 FGNPPRWFTYAELELATNRFSEANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGKRLLVYEYICNGSLDSHLY 494
            F  P R  T+A+L  ATN F   + +  GGFG V++ +L DG  VA+K+    S QGD+EF +E+E +   +HRN+V L+G+C    +RLLVYE++  GSL+  L+
Sbjct:  864 FEKPLRKLTFADLLQATNGFHNDSLIGSGGFGDVYKAILKDGSAVAIKKLIHVSGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLH 969          
BLAST of CX292443 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.977e-19
Identity = 43/98 (43.88%), Postives = 66/98 (67.35%), Query Frame = 3
Query:  204 YAELELATNRFSEANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGKRLLVYEYICNGSLDSHLYG 497
            + ++  ATN F E   + +GGFG V++ +LPDG   A+K+ K  S QG  EF +E++VLS  +HR++V L G+C E+ + +LVYE++  G+L  HLYG
Sbjct:  478 FTDILSATNNFDEQLLIGKGGFGYVYKAILPDGTKAAIKRGKTGSGQGILEFQTEIQVLSRIRHRHLVSLTGYCEENSEMILVYEFMEKGTLKEHLYG 575          
BLAST of CX292443 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.977e-19
Identity = 46/106 (43.40%), Postives = 67/106 (63.21%), Query Frame = 3
Query:  180 GNPPRWFTYAELELATNRFSEANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGKRLLVYEYICNGSLDSHLYG 497
            G   R FT  E+  ATN FS+ N +  GGFG V + VL DG + A+K+ KL +++G  +  +EV +L    HR++V L+G CV+    LL+YE+I NG+L  HL+G
Sbjct:  345 GKSSRIFTGREITKATNNFSKDNLIGTGGFGEVFKAVLEDGTITAIKRAKLNNTKGTDQILNEVRILCQVNHRSLVRLLGCCVDLELPLLIYEFIPNGTLFEHLHG 450          
BLAST of CX292443 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.977e-19
Identity = 48/101 (47.52%), Postives = 66/101 (65.35%), Query Frame = 3
Query:  192 RWFTYAELELATNRFSEANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGKRLLVYEYICNGSLDSHLY 494
            R F   ELE AT  FS    L EGG G+V++G+L DG++VAVK+ K+      +EF +EV +LS   HRN+V L+G C+E    +LVYE+I NG+L  HL+
Sbjct:  419 RVFNSRELEKATENFSLTRILGEGGQGTVYKGMLVDGRIVAVKKSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETDVPILVYEFIPNGNLFEHLH 519          
The following BLAST results are available for this feature:
BLAST of CX292443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
CRK19_ARATH2.918e-1946.46Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
CRK14_ARATH2.918e-1948.48Cysteine-rich receptor-like protein kinase 14 OS=A... [more]
BRI1_SOLPE2.918e-1944.44Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
BRI1_SOLLC2.918e-1944.44Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
CRK23_ARATH3.811e-1945.45Putative cysteine-rich receptor-like protein kinas... [more]
BRL1_ARATH3.811e-1945.37Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
BRI1_ARATH3.811e-1943.40Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
Y2232_ARATH4.977e-1943.88Probable receptor-like protein kinase At2g23200 OS... [more]
WAKLQ_ARATH4.977e-1943.40Wall-associated receptor kinase-like 20 OS=Arabido... [more]
WAKLJ_ARATH4.977e-1947.52Wall-associated receptor kinase-like 10 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionC04015G08SK FlavFr1 Citrus clementina cDNA clone C04015G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292443 ID=CX292443; Name=CX292443; organism=Citrus clementina; type=EST; length=542bp
ATGAATTCCTGTTGGAGAAATTATCAACATTGAATCGAGAGCCTGATATC
GGAGTGCTGAATTATAAGCTTGATCTGAAAATAAGTAAAAGTGTGAGAGA
GGCAGTTTCATTATCCAGGAATAAACCTCCAGGTCCTCCTCCATTGTGTT
CAATATGTCAGCACAAGGCACCTGTATTTGGTAATCCTCCGAGGTGGTTC
ACCTATGCTGAATTGGAGCTTGCTACAAATAGATTTTCAGAAGCAAATTT
CTTGGCTGAAGGTGGATTTGGTTCTGTTCACCGAGGTGTTCTACCAGATG
GCCAGGTTGTTGCCGTCAAGCAATATAAATTGGCTAGTTCTCAAGGTGAT
CAAGAATTTTGCTCAGAAGTTGAGGTTTTAAGTTGTGCACAACATCGCAA
TGTTGTGATGTTGATTGGATTCTGTGTGGAGGATGGGAAGAGATTGCTGG
TTTATGAGTATATTTGCAATGGGTCCTTGGATTCCCATCTTTATGGTAAA
TTCAACTTTATCCTAAATGGTTTTATAATTTACACTAACGTT
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