CX292443

Overview
NameCX292443
Unique NameCX292443
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length542
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292443 vs. ExPASy Swiss-Prot
Match: CRK7_ARATH (Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana GN=CRK7 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.977e-19
Identity = 45/97 (46.39%), Postives = 66/97 (68.04%), Query Frame = 3
Query:  204 YAELELATNRFSEANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGKRLLVYEYICNGSLDSHLY 494
            Y  ++ ATN FSE N +  GGFG V++G   +G  VAVK+    S QGD EF +EV V++  +H+N+V ++GF +E  +R+LVYEY+ N SLD+ L+
Sbjct:  326 YRAIQAATNDFSENNKIGRGGFGDVYKGTFSNGTEVAVKRLSKTSEQGDTEFKNEVVVVANLRHKNLVRILGFSIEREERILVYEYVENKSLDNFLF 422          
BLAST of CX292443 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 4.977e-19
Identity = 44/97 (45.36%), Postives = 68/97 (70.10%), Query Frame = 3
Query:  204 YAELELATNRFSEANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGKRLLVYEYICNGSLDSHLY 494
            +  +E+AT  F++ N L +GGFG V++G L +G  VAVK+    S QG QEF +EV +++  QHRN+V L+G+C+E  +++LVYE++ N SLD  L+
Sbjct:  357 FKTIEVATENFAKTNKLGQGGFGEVYKGTLVNGTEVAVKRLSKTSEQGAQEFKNEVVLVAKLQHRNLVKLLGYCLEPEEKILVYEFVPNKSLDYFLF 453          
BLAST of CX292443 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.977e-19
Identity = 47/105 (44.76%), Postives = 72/105 (68.57%), Query Frame = 3
Query:  192 RWFTYAELELATNRFSEANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASSQ--GDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGKRLLVYEYICNGSLDSHLYGK 500
            R FTY ELE A + F E + + +G F  V++GVL DG  VAVK+  ++S +     EF +E+++LS   H +++ L+G+C E G+RLLVYE++ +GSL +HL+GK
Sbjct:  498 RVFTYEELEKAADGFKEESIVGKGSFSCVYKGVLRDGTTVAVKRAIMSSDKQKNSNEFRTELDLLSRLNHAHLLSLLGYCEECGERLLVYEFMAHGSLHNHLHGK 602          
BLAST of CX292443 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 6.501e-19
Identity = 49/101 (48.51%), Postives = 66/101 (65.35%), Query Frame = 3
Query:  192 RWFTYAELELATNRFSEANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGKRLLVYEYICNGSLDSHLY 494
            R FT  ELE AT  FSE   L  GG G+V++G+L DG+ VAVK+ K+      QEF +EV +LS   HR+VV L+G C+E    +LVYE+I NG+L  H++
Sbjct:  430 RIFTSKELEKATENFSENRVLGHGGQGTVYKGMLVDGRTVAVKKSKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPILVYEFIINGNLFKHIH 530          
BLAST of CX292443 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.501e-19
Identity = 48/111 (43.24%), Postives = 71/111 (63.96%), Query Frame = 3
Query:  198 FTYAELEL----------ATNRFSEANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGKRLLVYEYICNGSLDSHLYGK 500
            + + ELEL          AT  FS  N L +GGFG V++G L DG+ +AVK+    S QG  EF +EV +++  QH N+V ++G C+E  +++L+YEY+ N SLDS+L+GK
Sbjct:  506 YKFEELELPLIEMETVVKATENFSSCNKLGQGGFGIVYKGRLLDGKEIAVKRLSKTSVQGTDEFMNEVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLENLSLDSYLFGK 616          
BLAST of CX292443 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 6.501e-19
Identity = 48/101 (47.52%), Postives = 67/101 (66.34%), Query Frame = 3
Query:  198 FTYAELELATNRFSEANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGKRLLVYEYICNGSLDSHLYGK 500
            FT   +E AT ++     + EGGFGSV+RG L DGQ VAVK     S+QG +EF +E+ +LS  QH N+V L+G+C E  +++LVY ++ NGSL   LYG+
Sbjct:  586 FTLEYIEQATEQYK--TLIGEGGFGSVYRGTLDDGQEVAVKVRSSTSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGE 684          
BLAST of CX292443 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 93.2041 bits (230), Expect = 8.490e-19
Identity = 53/139 (38.13%), Postives = 81/139 (58.27%), Query Frame = 3
Query:   78 KISKSVREAVSLSRNKPPGPPPLCSICQHKAPVFGNPPRWFTYAELELATNRFSEANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGKRLLVYEYICNGSLDSHLY 494
            ++   + E+ S++R +      L  I      +F +  +  +Y +L  +TN F +AN +  GGFG V++  LPDG+ VA+K+      Q ++EF +EVE LS AQH N+V+L GFC     RLL+Y Y+ NGSLD  L+
Sbjct:  688 EVDPEIEESESMNRKE------LGEIGSKLVVLFQSNDKELSYDDLLDSTNSFDQANIIGCGGFGMVYKATLPDGKKVAIKKLSGDCGQIEREFEAEVETLSRAQHPNLVLLRGFCFYKNDRLLIYSYMENGSLDYWLH 820          
BLAST of CX292443 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.109e-18
Identity = 48/99 (48.48%), Postives = 69/99 (69.70%), Query Frame = 3
Query:  198 FTYAELELATNRFSEANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASSQGDQ-EFCSEVEVLSCAQHRNVVMLIGFCVEDGKRLLVYEYICNGSLDSHL 491
            F+  EL++A++ FS  N L  GGFG V++G L DG +VAVK+ K   +QG + +F +EVE++S A HRN++ L GFC+   +RLLVY Y+ NGS+ S L
Sbjct:  277 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL 375          
BLAST of CX292443 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 1.448e-18
Identity = 49/99 (49.49%), Postives = 68/99 (68.69%), Query Frame = 3
Query:  198 FTYAELELATNRFSEANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASSQGDQ-EFCSEVEVLSCAQHRNVVMLIGFCVEDGKRLLVYEYICNGSLDSHL 491
            FT  EL +AT+ FS  N L  GGFG V++G L DG +VAVK+ K   ++G + +F +EVE++S A HRN++ L GFC+   +RLLVY Y+ NGS+ S L
Sbjct:  282 FTLRELLVATDNFSNKNVLGRGGFGKVYKGRLADGNLVAVKRLKEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL 380          
BLAST of CX292443 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.448e-18
Identity = 45/99 (45.45%), Postives = 67/99 (67.68%), Query Frame = 3
Query:  198 FTYAELELATNRFSEANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGKRLLVYEYICNGSLDSHLY 494
            F +  +  AT+ FS  N + +GGFGSV++G LP G+ +AVK+    S QG+ EF +EV +L+  QHRN+V L+GFC E  + +LVYE++ N SLD  ++
Sbjct:  327 FDFRMILTATDDFSFENKIGQGGFGSVYKGKLPGGEEIAVKRLTRGSGQGEIEFRNEVLLLTRLQHRNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIF 425          
The following BLAST results are available for this feature:
BLAST of CX292443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
CRK7_ARATH4.977e-1946.39Cysteine-rich receptor-like protein kinase 7 OS=Ar... [more]
CRK12_ARATH4.977e-1945.36Putative cysteine-rich receptor-like protein kinas... [more]
ACR4_ARATH4.977e-1944.76Serine/threonine-protein kinase-like protein ACR4 ... [more]
WAKLM_ARATH6.501e-1948.51Wall-associated receptor kinase-like 17 OS=Arabido... [more]
SRK6_BRAOE6.501e-1943.24Putative serine/threonine-protein kinase receptor ... [more]
NORK_MEDTR6.501e-1947.52Nodulation receptor kinase OS=Medicago truncatula ... [more]
PSKR1_ARATH8.490e-1938.13Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
BAK1_ARATH1.109e-1848.48BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
SERK4_ARATH1.448e-1849.49Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
CRK38_ARATH1.448e-1845.45Cysteine-rich receptor-like protein kinase 38 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC04015G08SK FlavFr1 Citrus clementina cDNA clone C04015G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292443 ID=CX292443; Name=CX292443; organism=Citrus clementina; type=EST; length=542bp
ATGAATTCCTGTTGGAGAAATTATCAACATTGAATCGAGAGCCTGATATC
GGAGTGCTGAATTATAAGCTTGATCTGAAAATAAGTAAAAGTGTGAGAGA
GGCAGTTTCATTATCCAGGAATAAACCTCCAGGTCCTCCTCCATTGTGTT
CAATATGTCAGCACAAGGCACCTGTATTTGGTAATCCTCCGAGGTGGTTC
ACCTATGCTGAATTGGAGCTTGCTACAAATAGATTTTCAGAAGCAAATTT
CTTGGCTGAAGGTGGATTTGGTTCTGTTCACCGAGGTGTTCTACCAGATG
GCCAGGTTGTTGCCGTCAAGCAATATAAATTGGCTAGTTCTCAAGGTGAT
CAAGAATTTTGCTCAGAAGTTGAGGTTTTAAGTTGTGCACAACATCGCAA
TGTTGTGATGTTGATTGGATTCTGTGTGGAGGATGGGAAGAGATTGCTGG
TTTATGAGTATATTTGCAATGGGTCCTTGGATTCCCATCTTTATGGTAAA
TTCAACTTTATCCTAAATGGTTTTATAATTTACACTAACGTT
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