CX292453

Overview
NameCX292453
Unique NameCX292453
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length435
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292453 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.554e-28
Identity = 63/143 (44.06%), Postives = 97/143 (67.83%), Query Frame = 2
Query:    5 IAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLVYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISDFGTARVFGGEEISTNTNRVVGTYG 433
            IA+KR    S QG  EFK E+ L++++ H+N+VKLLG C ++ E+MLVYE++PN SL   +  ++  +L DW +R  I LG  +G+ YLH+ +   IIHRD+K++NILLDE +  +++DFG +++ G  E +  T +V GT G
Sbjct:  659 IAIKRAQQGSMQGAFEFKTEIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGLSGKNGVKL-DWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSKLVGDPEKAHVTTQVKGTMG 800          
BLAST of CX292453 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 2.554e-28
Identity = 63/143 (44.06%), Postives = 91/143 (63.64%), Query Frame = 2
Query:    5 IAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLVYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISDFGTARVFGGEEISTNTNRVVGTYG 433
            +AVKR        +EEF NEV+++A++ HRN+VKLLGCCLE +  +LVYEF+PN  L   + DE    ++ W+ R  I + IA  + YLH  +   I HRD+K +NILLDE+   ++SDFGT+R    ++    T +V GT+G
Sbjct:  449 VAVKRSKAMDEDKVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLRDECDDYIMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTSRSVTIDQTHL-TTQVAGTFG 590          
BLAST of CX292453 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.554e-28
Identity = 67/148 (45.27%), Postives = 99/148 (66.89%), Query Frame = 2
Query:    2 EIAVKRLST--TSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLVYEFMPNKSLDYFIFDESRKQL--LDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISDFGTARVFGGEEISTNTNRVVGTYG 433
            +IAVKR+     +G+G  EFK+E+ ++ K++HR+LV LLG CL+ +EK+LVYE+MP  +L   +F+ S + L  L WK+R  + L +ARGV YLH  +    IHRDLK SNILL ++M  +++DFG  R+    + S  T R+ GT+G
Sbjct:  612 KIAVKRMENGVIAGKGFAEFKSEIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLTLALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIET-RIAGTFG 758          
BLAST of CX292453 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.554e-28
Identity = 64/144 (44.44%), Postives = 91/144 (63.19%), Query Frame = 2
Query:    5 IAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLVYEFMPNKSLDYFIFDESRKQL-LDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISDFGTARVFGGEEISTNTNRVVGTYG 433
            +A+K+L   SGQG  EF  E+  I K++HRNLV LLG C   DE++LVYEFM   SL+  + D  +  + L+W  R  I +G ARG+ +LH +    IIHRD+K+SN+LLDE +  R+SDFG AR+    +   + + + GT G
Sbjct:  908 VAIKKLIHVSGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPKKAGVKLNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPG 1051          
BLAST of CX292453 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 3.336e-28
Identity = 72/147 (48.98%), Postives = 94/147 (63.95%), Query Frame = 2
Query:    5 IAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLVYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISDFGTARVF----GGEEISTNTNRVVGTYG 433
            +AVKR    S QG +EF  E+ L+++L HRNLV LLG C +K E+MLVYE+MPN SL   +    R Q L    R  I LG ARG+LYLH ++   IIHRD+K SNILLD +MNP+++DFG +++     GG +    T  V GT G
Sbjct:  656 VAVKRAEQGSLQGQKEFFTEIELLSRLHHRNLVSLLGYCDQKGEQMLVYEYMPNGSLQDALSARFR-QPLSLALRLRIALGSARGILYLHTEADPPIIHRDIKPSNILLDSKMNPKVADFGISKLIALDGGGVQRDHVTTIVKGTPG 801          
BLAST of CX292453 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.357e-28
Identity = 65/144 (45.14%), Postives = 93/144 (64.58%), Query Frame = 2
Query:    5 IAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLVYEFMPNKSLDYFIFD-ESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISDFGTARVFGGEEISTNTNRVVGTYG 433
            +AVK+L     QG  EF  EVL+++ L H NLV L+G C + D+++LVYEFMP  SL+  + D    K+ LDW  R  I  G A+G+ +LH  +   +I+RD K+SNILLDE  +P++SDFG A++    + S  + RV+GTYG
Sbjct:  112 VAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 255          
BLAST of CX292453 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.690e-28
Identity = 68/145 (46.90%), Postives = 92/145 (63.45%), Query Frame = 2
Query:    2 EIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLVYEFMPNKSL-DYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISDFGTARVFGGEEISTNTNRVVGTYG 433
            E+AVK  S TS QG  EF NE+ L++ +QH NLV LLG C E D+++LVY FM N SL D    + +++++LDW  R  I LG ARG+ YLH      +IHRD+K+SNILLD  M  +++DFG ++    E  S  +  V GT G
Sbjct:  619 EVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAG 763          
BLAST of CX292453 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 7.431e-28
Identity = 63/145 (43.45%), Postives = 97/145 (66.90%), Query Frame = 2
Query:    2 EIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLVYEFMPNKSLDYFIFDESRKQ-LLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISDFGTARVFGGEEISTNTNRVVGTYG 433
            E+AVK+L    GQ  +EF+ EV  I  ++H+NLV+LLG C+E   +MLVYE++ + +L+ ++    R+   L W+ R  II G A+ + YLH+    +++HRD+KASNIL+D+E N ++SDFG A++    E S  T RV+GT+G
Sbjct:  207 EVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNSGNLEQWLHGAMRQHGNLTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGE-SHITTRVMGTFG 350          
BLAST of CX292453 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 7.431e-28
Identity = 61/143 (42.66%), Postives = 90/143 (62.94%), Query Frame = 2
Query:    5 IAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLVYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISDFGTARVFGGEEISTNTNRVVGTYG 433
            +AVKR        +EEF NE++L++++ HRN+VKLLGCCLE +  +LVYE++PN  L   + DE    ++ W+ R  I + IA  + Y+H  +   I HRD+K +NILLDE+   +ISDFGT+R    ++    T  V GT+G
Sbjct:  453 VAVKRSKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDEYDDYMMTWEVRLRIAVEIAGALSYMHSAASFPIFHRDIKTTNILLDEKYRAKISDFGTSRSVATDQTHL-TTLVAGTFG 594          
BLAST of CX292453 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 7.431e-28
Identity = 61/143 (42.66%), Postives = 90/143 (62.94%), Query Frame = 2
Query:    5 IAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLVYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISDFGTARVFGGEEISTNTNRVVGTYG 433
            +AVKR        +EEF NE++L++++ HRN+VKLLGCCLE +  +LVYE++PN  L   + DES    + W+ R  I + IA  + Y+H  +   I HRD+K +NILLDE+   ++SDFGT+R    ++    T  V GT+G
Sbjct:  454 VAVKRSKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDESDDYTMTWEVRLRIAIEIAGALTYMHSAASFPIFHRDIKTTNILLDEKYRAKVSDFGTSRSVTLDQTHL-TTLVAGTFG 595          
The following BLAST results are available for this feature:
BLAST of CX292453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
Y5977_ARATH2.554e-2844.06Probable leucine-rich repeat receptor-like protein... [more]
WAKLD_ARATH2.554e-2844.06Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
TMK1_ARATH2.554e-2845.27Probable receptor protein kinase TMK1 OS=Arabidops... [more]
BRI1_ARATH2.554e-2844.44Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
Y5374_ARATH3.336e-2848.98Probable LRR receptor-like serine/threonine-protei... [more]
PBS1_ARATH4.357e-2845.14Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
NORK_PEA5.690e-2846.90Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
Y2296_ARATH7.431e-2843.45Probable receptor-like protein kinase At2g42960 OS... [more]
WAKLC_ARATH7.431e-2842.66Wall-associated receptor kinase-like 3 OS=Arabidop... [more]
WAKLA_ARATH7.431e-2842.66Wall-associated receptor kinase-like 1 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionC04015H08SK FlavFr1 Citrus clementina cDNA clone C04015H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292453 ID=CX292453; Name=CX292453; organism=Citrus clementina; type=EST; length=435bp
GGAGATAGCTGTCAAAAGGTTATCAACAACATCAGGACAAGGAATTGAGG
AATTCAAAAATGAGGTCTTATTGATAGCAAAACTTCAACACAGAAATCTT
GTAAAGCTCTTGGGTTGTTGTTTGGAAAAAGATGAAAAGATGTTAGTCTA
TGAGTTCATGCCTAACAAAAGCTTGGACTACTTTATTTTTGATGAATCAA
GGAAGCAATTGTTGGATTGGAAAAAGCGCTTCGATATAATTTTAGGGATA
GCTCGAGGGGTCCTATATCTACATCAAGATTCGAGGTTAAGAATTATCCA
TCGAGACTTGAAAGCTAGTAATATTCTTCTAGATGAAGAGATGAACCCTA
GAATCTCAGATTTTGGTACAGCTAGAGTATTTGGAGGAGAGGAGATATCA
ACAAATACAAATAGGGTGGTTGGAACGTATGGCTA
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