CX292453

Overview
NameCX292453
Unique NameCX292453
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length435
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292453 vs. ExPASy Swiss-Prot
Match: HSL2_ARATH (LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 6.955e-26
Identity = 65/153 (42.48%), Postives = 94/153 (61.44%), Query Frame = 2
Query:    5 IAVKRLSTTSGQGIEE---FKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLVYEFMPNKSLDYFIFDESRKQL---LDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISDFGTARVFGGEE----ISTNTNRVVGTYG 433
            +AVK+L   +GQ  E    F++EV  + +++H N+VKLL CC  ++ + LVYEFM N SL   +  E   +    LDW  RF I +G A+G+ YLH DS   I+HRD+K++NILLD EM PR++DFG A+    E+       + + V G+YG
Sbjct:  711 LAVKKLWGETGQKTESESVFRSEVETLGRVRHGNIVKLLMCCNGEEFRFLVYEFMENGSLGDVLHSEKEHRAVSPLDWTTRFSIAVGAAQGLSYLHHDSVPPIVHRDVKSNNILLDHEMKPRVADFGLAKPLKREDNDGVSDVSMSCVAGSYG 863          
BLAST of CX292453 vs. ExPASy Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 9.084e-26
Identity = 59/149 (39.60%), Postives = 90/149 (60.40%), Query Frame = 2
Query:    5 IAVKRLSTTSGQGI------EEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLVYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISDFGTARVFGGEEISTNTNRVVGTYG 433
            IAVKRL  T  + I      +EF NEV  + +++HRN+VKL G C  +    L+YE+M   SL+  + ++   + L W KR +++ G+A  + Y+H D    I+HRD+ + NILLD +   +ISDFGTA++   +  S+N + V GTYG
Sbjct:  875 IAVKRLHDTIDEEISKPVVKQEFLNEVKALTEIRHRNVVKLFGFCSHRRHTFLIYEYMEKGSLNKLLANDEEAKRLTWTKRINVVKGVAHALSYMHHDRITPIVHRDISSGNILLDNDYTAKISDFGTAKLLKTD--SSNWSAVAGTYG 1021          
BLAST of CX292453 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 9.084e-26
Identity = 61/144 (42.36%), Postives = 90/144 (62.50%), Query Frame = 2
Query:    5 IAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLVYEFMPNKSLDYFIFDESRK-QLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISDFGTARVFGGEEISTNTNRVVGTYG 433
            +AVK+        +EEF NEV++++++ HRN+VKLLGCCLE D  +LVYEF+PN +L   + D+S    +  W+ R  I + IA  + YLH  +   I HRD+K++NI+LDE+   ++SDFGT+R    +     T  V GT G
Sbjct:  458 VAVKKSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETDVPILVYEFIPNGNLFEHLHDDSDDYTMTTWEVRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNIMLDEKHRAKVSDFGTSRTVTVDHTHL-TTVVSGTVG 600          
BLAST of CX292453 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 9.084e-26
Identity = 63/144 (43.75%), Postives = 93/144 (64.58%), Query Frame = 2
Query:    5 IAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLVYEFMPNKSLDYFIFDESRK-QLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISDFGTARVFGGEEISTNTNRVVGTYG 433
            IAVK+L+    QG  E+  E+  + +L H NLVKL+G CLE + ++LVYEFM   SL+  +F      + L W  R ++ L  A+G+ +LH D  +++I+RD+KASNILLD + N ++SDFG AR     ++S  + RV+GTYG
Sbjct:  102 IAVKKLNQEGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYEFMQKGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAFLHSDP-VKVIYRDIKASNILLDADYNAKLSDFGLARDGPMGDLSYVSTRVMGTYG 244          
BLAST of CX292453 vs. ExPASy Swiss-Prot
Match: Y4885_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3)

HSP 1 Score: 115.161 bits (287), Expect = 1.186e-25
Identity = 58/149 (38.93%), Postives = 91/149 (61.07%), Query Frame = 2
Query:    5 IAVKRLSTTSGQGI------EEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLVYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISDFGTARVFGGEEISTNTNRVVGTYG 433
            +AVK+L+ T+   I      +EF NE+  + +++HRN+VKL G C  +    LVYE+M   SL   + ++   + LDW KR +++ G+A  + Y+H D    I+HRD+ + NILL E+   +ISDFGTA++   +  S+N + V GTYG
Sbjct:  799 MAVKKLNETTDSSISNPSTKQEFLNEIRALTEIRHRNVVKLFGFCSHRRNTFLVYEYMERGSLRKVLENDDEAKKLDWGKRINVVKGVAHALSYMHHDRSPAIVHRDISSGNILLGEDYEAKISDFGTAKLLKPD--SSNWSAVAGTYG 945          
BLAST of CX292453 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.186e-25
Identity = 59/146 (40.41%), Postives = 92/146 (63.01%), Query Frame = 2
Query:    5 IAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLVYEFMPNKSLDYFIFDE---SRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISDFGTARVFGGEEISTNTNRVVGTYG 433
            +A+K+L   S QG  EF  E+  + K++HRNLV LLG C   +E++LVYEFM   SL+  +       ++++L W++R  I  G A+G+ +LH +    IIHRD+K+SN+LLD++M  R+SDFG AR+    +   + + + GT G
Sbjct:  863 VAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKIGEERLLVYEFMQYGSLEEVLHGPRTGEKRRILGWEERKKIAKGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDQDMEARVSDFGMARLISALDTHLSVSTLAGTPG 1008          
BLAST of CX292453 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.550e-25
Identity = 61/146 (41.78%), Postives = 95/146 (65.07%), Query Frame = 2
Query:    2 EIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLVYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISDFGTAR--VFGGEEISTNTNRVVGTYG 433
            ++A+KR +  S QGI EF  E+ +++KL+HR+LV L+G C E  E +LVYE+M N      ++ ++   L  WK+R +I +G ARG+ YLH  +   IIHRD+K++NILLDE +  +++DFG ++   FG   +ST    V G++G
Sbjct:  549 QVAIKRGNPQSEQGITEFHTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEYMSNGPFRDHLYGKNLSPLT-WKQRLEICIGAARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVAFGQNHVST---AVKGSFG 690          
BLAST of CX292453 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 1.550e-25
Identity = 56/124 (45.16%), Postives = 81/124 (65.32%), Query Frame = 2
Query:    5 IAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLVYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISDFGTAR 376
            +AVK+        +EEF NEV++++++ HR++VKLLGCCLE +   LVYEF+PN +L   I +ES      W  R  I + IA  + YLH  +   I HRD+K++NILLDE+   ++SDFGT+R
Sbjct:  476 VAVKKSKVVDEDKLEEFINEVVILSQINHRHVVKLLGCCLETEVPTLVYEFIPNGNLFQHIHEESDDYTKTWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRTKVSDFGTSR 599          
BLAST of CX292453 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.550e-25
Identity = 57/153 (37.25%), Postives = 91/153 (59.48%), Query Frame = 2
Query:    5 IAVKRL---------STTSGQGIEE-FKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLVYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISDFGTARVFGGEEISTNTNRVVGTYG 433
            IAVK+L           T   G+ + F  EV  +  ++H+N+V+ LGCC  K+ ++L+Y++M N SL   + + S    L W+ R+ IILG A+G+ YLH D    I+HRD+KA+NIL+  +  P I DFG A++    + + ++N + G+YG
Sbjct:  810 IAVKKLWPVTVPNLNEKTKSSGVRDSFSAEVKTLGSIRHKNIVRFLGCCWNKNTRLLMYDYMSNGSLGSLLHERSGVCSLGWEVRYKIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPDFEPYIGDFGLAKLVDDGDFARSSNTIAGSYG 962          
BLAST of CX292453 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 2.024e-25
Identity = 60/144 (41.67%), Postives = 89/144 (61.81%), Query Frame = 2
Query:    5 IAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLVYEFMPNKSLDYFIFDESRKQLL-DWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISDFGTARVFGGEEISTNTNRVVGTYG 433
            +AVK+        +EEF NEV++++++ HRN+VKLLGCCLE    +LVYEF+PN +L   + DE  + ++  W  R  I + IA  + YLH  +   I HRD+K++NI+LDE+   ++SDFGT+R    +     T  V GT G
Sbjct:  472 VAVKKSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETKVPVLVYEFIPNGNLFEHLHDEFDENIMATWNIRLRIAIDIAGALSYLHSSASSPIYHRDVKSTNIMLDEKYRAKVSDFGTSRTVTVDHTHL-TTVVSGTVG 614          
The following BLAST results are available for this feature:
BLAST of CX292453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
HSL2_ARATH6.955e-2642.48LRR receptor-like serine/threonine-protein kinase ... [more]
Y1571_ARATH9.084e-2639.60Probable leucine-rich repeat receptor-like protein... [more]
WAKLJ_ARATH9.084e-2642.36Wall-associated receptor kinase-like 10 OS=Arabido... [more]
BIK1_ARATH9.084e-2643.75Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
Y4885_ARATH1.186e-2538.93Probable LRR receptor-like serine/threonine-protei... [more]
BRL2_ARATH1.186e-2540.41Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
Y2214_ARATH1.550e-2541.78Probable receptor-like protein kinase At2g21480 OS... [more]
WAKLK_ARATH1.550e-2545.16Putative wall-associated receptor kinase-like 11 O... [more]
RCH1_ARATH1.550e-2537.25LRR receptor-like serine/threonine-protein kinase ... [more]
WAKLH_ARATH2.024e-2541.67Wall-associated receptor kinase-like 9 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionC04015H08SK FlavFr1 Citrus clementina cDNA clone C04015H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292453 ID=CX292453; Name=CX292453; organism=Citrus clementina; type=EST; length=435bp
GGAGATAGCTGTCAAAAGGTTATCAACAACATCAGGACAAGGAATTGAGG
AATTCAAAAATGAGGTCTTATTGATAGCAAAACTTCAACACAGAAATCTT
GTAAAGCTCTTGGGTTGTTGTTTGGAAAAAGATGAAAAGATGTTAGTCTA
TGAGTTCATGCCTAACAAAAGCTTGGACTACTTTATTTTTGATGAATCAA
GGAAGCAATTGTTGGATTGGAAAAAGCGCTTCGATATAATTTTAGGGATA
GCTCGAGGGGTCCTATATCTACATCAAGATTCGAGGTTAAGAATTATCCA
TCGAGACTTGAAAGCTAGTAATATTCTTCTAGATGAAGAGATGAACCCTA
GAATCTCAGATTTTGGTACAGCTAGAGTATTTGGAGGAGAGGAGATATCA
ACAAATACAAATAGGGTGGTTGGAACGTATGGCTA
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