CX292757

Overview
NameCX292757
Unique NameCX292757
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length660
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292757 vs. ExPASy Swiss-Prot
Match: OLPA_TOBAC (Osmotin-like protein OS=Nicotiana tabacum GN=OLPA PE=1 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.293e-71
Identity = 118/190 (62.11%), Postives = 142/190 (74.74%), Query Frame = 3
Query:   93 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRV--IKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTC 653
            F++ NNCP TVWAAA P GGGR+L++GQ+W   A PGTK ARIW RT C FD +G+G C+TGDC G+LEC+G+G  PNTLAEYAL QF+++DF D+S IDGFN+PM F    P   +   I+CTANI GECP  L+VPGGCN PC  F   +YCC  G CGPT  S++FK RCPD YSYP+DD TSTFTC
Sbjct:   25 FEVHNNCPYTVWAAATPVGGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKGWGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTC 214          
BLAST of CX292757 vs. ExPASy Swiss-Prot
Match: PRR2_TOBAC (Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 2.880e-71
Identity = 121/190 (63.68%), Postives = 142/190 (74.74%), Query Frame = 3
Query:   93 FDITNNCPDTVWAAAVPGGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNS--GNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCP 656
            FDI N C  TVWAAA PGGGRQL+ GQ+W+I   PGT  ARIW RT C FD SG+G CETGDCNG+LECQGYG  PNTLAE+AL Q N  DF+D+S +DGFN+PMEFS  +  C R ++CTA I  +CP +LK  GGCN PC V KT+E+CC +  G+CGPT  S+FFK RCPD YSYP+DD  S FTCP
Sbjct:   28 FDIVNQCTYTVWAAASPGGGRQLNSGQSWSINVNPGTVQARIWGRTNCNFDGSGRGNCETGDCNGMLECQGYGKPPNTLAEFALNQPN-QDFVDISLVDGFNIPMEFSPTNGGC-RNLRCTAPINEQCPAQLKTQGGCNNPCTVIKTNEFCCTNGPGSCGPTDLSRFFKARCPDAYSYPQDDPPSLFTCP 215          
BLAST of CX292757 vs. ExPASy Swiss-Prot
Match: ZEAM_MAIZE (Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2)

HSP 1 Score: 266.544 bits (680), Expect = 8.380e-71
Identity = 122/193 (63.21%), Postives = 146/193 (75.65%), Query Frame = 3
Query:   93 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPS-CNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCC---NSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCP 656
            F + N CP TVWAA+VP GGGRQL++G++W ITA  GT AARIWART C+FDASG+G C TGDC G+L+C GYG APNTLAEYALKQFN++DF D+S IDGFNVPM F     S C+R  +C  ++   CP EL+  G CN  CPVFK DEYCC    + +C PT +S++FK +CPD YSYPKDDATSTFTCP
Sbjct:   24 FTVVNQCPFTVWAASVPVGGGRQLNRGESWRITAPAGTTAARIWARTGCKFDASGRGSCRTGDCGGVLQCTGYGRAPNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGSGCSRGPRCAVDVNARCPAELRQDGVCNNACPVFKKDEYCCVGSAANDCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCP 216          
BLAST of CX292757 vs. ExPASy Swiss-Prot
Match: IAAT_MAIZE (Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.429e-70
Identity = 121/193 (62.69%), Postives = 145/193 (75.13%), Query Frame = 3
Query:   93 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPS-CNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCC---NSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCP 656
            F + N CP TVWAA+VP GGGRQL++G++W ITA  GT AARIWART CQFDASG+G C TGDC G+++C GYG APNTLAEYALKQFN++DF D+S +DGFNVP  F     S C+R  +C  ++   CP EL+  G CN  CPVFK DEYCC    + NC PT +S++FK +CPD YSYPKDDATSTFTCP
Sbjct:    3 FTVVNQCPFTVWAASVPVGGGRQLNRGESWRITAPAGTTAARIWARTGCQFDASGRGSCRTGDCGGVVQCTGYGRAPNTLAEYALKQFNNLDFFDISILDGFNVPYSFLPDGGSGCSRGPRCAVDVNARCPAELRQDGVCNNACPVFKKDEYCCVGSAANNCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCP 195          
BLAST of CX292757 vs. ExPASy Swiss-Prot
Match: THM2_THADA (Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 4.609e-61
Identity = 110/195 (56.41%), Postives = 137/195 (70.26%), Query Frame = 3
Query:   93 FDITNNCPDTVWAAAVPG------GGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVP-GGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCP 656
            F+I N C  TVWAAA  G      GGRQL+ G++WTI  EPGTK  +IWART C FD SG+G C TGDC GLL+C+ +G  P TLAE++L Q+   D+ID+SNI GFNVPM+FS  +  C R ++C A+I+G+CP +LK P GGCN  C VF+T EYCC +G CGPT +S+FFK  CPD +SY  D  T T TCP
Sbjct:   25 FEIVNRCSYTVWAAASKGDAALDAGGRQLNSGESWTINVEPGTKGGKIWARTDCYFDDSGRGICRTGDCGGLLQCKRFGRPPTTLAEFSLNQYG-KDYIDISNIKGFNVPMDFSPTTRGC-RGVRCAADIVGQCPAKLKAPGGGCNDACTVFQTSEYCCTTGKCGPTEYSRFFKRLCPDAFSYVLDKPT-TVTCP 216          
BLAST of CX292757 vs. ExPASy Swiss-Prot
Match: THM1_THADA (Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 6.655e-60
Identity = 109/195 (55.90%), Postives = 134/195 (68.72%), Query Frame = 3
Query:   93 FDITNNCPDTVWAAAVPG------GGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVP-GGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCP 656
            F+I N C  TVWAAA  G      GGRQL+ G++WTI  EPGT   +IWART C FD SG G C+TGDC GLL C+ +G  P TLAE++L Q+   D+ID+SNI GFNVPM FS  +  C R ++C A+I+G+CP +LK P GGCN  C VF+T EYCC +G CGPT +S+FFK  CPD +SY  D  T T TCP
Sbjct:    3 FEIVNRCSYTVWAAASKGDAALDAGGRQLNSGESWTINVEPGTNGGKIWARTDCYFDDSGSGICKTGDCGGLLRCKRFGRPPTTLAEFSLNQYG-KDYIDISNIKGFNVPMNFSPTTRGC-RGVRCAADIVGQCPAKLKAPGGGCNDACTVFQTSEYCCTTGKCGPTEYSRFFKRLCPDAFSYVLDKPT-TVTCP 194          
BLAST of CX292757 vs. ExPASy Swiss-Prot
Match: PRR3_JUNAS (Pathogenesis-related protein OS=Juniperus ashei PE=1 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.812e-57
Identity = 104/191 (54.45%), Postives = 127/191 (66.49%), Query Frame = 3
Query:   90 KFDITNNCPDTVWAAAVPGGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSG---NCGPTGFSKFFKDRCPDVYSYPKDDATSTFTC 653
            KFDI N C  TVWAA +PGGG++LD+GQTWT+    GT +AR W RT C FDASGKG C+TGDC G L C   GA P TLAEY     +D D+ D+S +DGFN+P+  +  +  C     C A+I   CP+ELKV GGCN  C VFKTD+YCC +    NC  T +SK FK++CP  YSY KDD T+TF C
Sbjct:   28 KFDIKNQCGYTVWAAGLPGGGKRLDQGQTWTVNLAAGTASARFWGRTGCTFDASGKGSCQTGDCGGQLSCTVSGAVPATLAEYTQ---SDQDYYDVSLVDGFNIPLAINPTNAQCT-APACKADINAVCPSELKVDGGCNSACNVFKTDQYCCRNAYVDNCPATNYSKIFKNQCPQAYSYAKDD-TATFAC 213          
BLAST of CX292757 vs. ExPASy Swiss-Prot
Match: PR5_ARATH (Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.629e-40
Identity = 91/206 (44.17%), Postives = 112/206 (54.37%), Query Frame = 3
Query:   93 FDITNNCPDTVWAAAVPG-------GGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEF--SSVSPSCNRVIKCTANILGECPNELKVPG-----GCNGPCPVFKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSTFTC 653
            F + NNCP TVWA  + G       GG +L  G +  +TA  G  + R WART C FDASG G+C TGDC GL  C G G  P TLAE+ L      DF D+S +DG+NV +    S  S  C +   C +++   CP+ LKV        C   C  F TD+YCC   N     C PT +S+ FK+ CPD YSY  DD TSTFTC
Sbjct:   26 FTLRNNCPTTVWAGTLAGQGPKLGDGGFELTPGASRQLTAPAGW-SGRFWARTGCNFDASGNGRCVTGDCGGL-RCNGGGVPPVTLAEFTLVGDGGKDFYDVSLVDGYNVKLGIRPSGGSGDC-KYAGCVSDLNAACPDMLKVMDQNNVVACKSACERFNTDQYCCRGANDKPETCPPTDYSRIFKNACPDAYSYAYDDETSTFTC 228          
BLAST of CX292757 vs. ExPASy Swiss-Prot
Match: TLP1_PYRPY (Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.131e-36
Identity = 85/211 (40.28%), Postives = 109/211 (51.66%), Query Frame = 3
Query:   90 KFDITNNCPDTVWAAAVPGGGR--------QLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFS--SVSPSCNRVIKCTANILGECPNELKVPG------GCNGPCPVFKTDEYCCNSG-----NCGPTGFSKFFKDRCPDVYSYPKDDATSTFTC 653
            KF  TN CP+TVW   + GGG         +L  G + ++T +    + R W R+ C  D+SGK KC TGDC +G + C G GA+P  +L E  L      DF D+S +DGFN+P++ +    S  CN    C ANI   CP EL   G      GC   C      +YCC         C PT FSK FK++CP  YSY  DD +STFTC
Sbjct:   24 KFTFTNKCPNTVWPGTLTGGGGPQLLSTGFELASGASTSLTVQ-APWSGRFWGRSHCSIDSSGKFKCSTGDCGSGQISCNGAGASPPASLVELTLATNGGQDFYDVSLVDGFNLPIKLAPRGGSGDCNST-SCAANINTVCPAELSDKGSDGSVIGCKSACLALNQPQYCCTGAYGTPDTCPPTDFSKVFKNQCPQAYSYAYDDKSSTFTC 232          
BLAST of CX292757 vs. ExPASy Swiss-Prot
Match: TP1A_MALDO (Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.805e-31
Identity = 80/213 (37.56%), Postives = 105/213 (49.30%), Query Frame = 3
Query:   90 KFDITNNCPDTVWAAAVPGG--------GRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSTFTC 653
            K   TNNCP+TVW   + G         G +L    + ++ A P   + R W RT+C  DA+GK  CET DC +G + C G GA P  TL E  +      D+ D+S +DGFN+PM   SV+P       +   C AN+   CP  L+V         C   C  F   +YCC   N     C PT +S+ F+ +CP  YSY  DD  STFTC
Sbjct:   26 KITFTNNCPNTVWPGTLTGDQKPQLSLTGFELASKASRSVDA-PSPWSGRFWGRTRCSTDAAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPM---SVAPQGGTGECKPSSCPANVNKVCPAPLQVKAADGSVISCKSACLAFGDSKYCCTPPNNTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTC 234          
The following BLAST results are available for this feature:
BLAST of CX292757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
OLPA_TOBAC1.293e-7162.11Osmotin-like protein OS=Nicotiana tabacum GN=OLPA ... [more]
PRR2_TOBAC2.880e-7163.68Pathogenesis-related protein R minor form OS=Nicot... [more]
ZEAM_MAIZE8.380e-7163.21Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2[more]
IAAT_MAIZE1.429e-7062.69Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 S... [more]
THM2_THADA4.609e-6156.41Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1[more]
THM1_THADA6.655e-6055.90Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1[more]
PRR3_JUNAS1.812e-5754.45Pathogenesis-related protein OS=Juniperus ashei PE... [more]
PR5_ARATH2.629e-4044.17Pathogenesis-related protein 5 OS=Arabidopsis thal... [more]
TLP1_PYRPY5.131e-3640.28Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1... [more]
TP1A_MALDO3.805e-3137.56Thaumatin-like protein 1a OS=Malus domestica GN=TL... [more]

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Properties
Property NameValue
Genbank descriptionC04019B11SK FlavFr1 Citrus clementina cDNA clone C04019B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292757 ID=CX292757; Name=CX292757; organism=Citrus clementina; type=EST; length=660bp
ATTATCCTCTCCAAATGAAGTTCGTTAAAGCTCTTCCCATTTCTTCTGCT
CTTCTTATTATCATTTCCATCACCCTGACTCATGCTGCCAAATTCGATAT
CACAAACAATTGCCCCGACACCGTCTGGGCCGCCGCTGTGCCCGGAGGCG
GCAGGCAACTCGACAAGGGTCAAACATGGACCATCACCGCCGAGCCAGGC
ACAAAAGCAGCCCGCATTTGGGCTCGAACCAAATGCCAGTTTGATGCTTC
CGGCAAAGGCAAATGCGAGACCGGTGACTGTAACGGACTCCTCGAGTGCC
AAGGCTACGGTGCAGCACCTAACACCTTGGCCGAGTACGCGTTGAAGCAA
TTTAATGACATGGATTTCATTGACATGTCCAACATTGACGGATTCAATGT
TCCCATGGAATTTAGCTCTGTCTCTCCCTCATGCAACCGCGTGATCAAGT
GCACTGCTAACATTCTTGGCGAGTGCCCGAATGAATTGAAGGTTCCTGGA
GGATGTAACGGGCCGTGCCCCGTGTTCAAGACCGACGAGTACTGTTGCAA
TTCAGGCAACTGCGGACCTACAGGTTTCTCCAAGTTTTTCAAGGATAGGT
GCCCGGATGTTTACAGTTACCCTAAGGATGACGCTACCAGCACATTTACT
TGCCCGACTG
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