CX292757
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292757 vs. ExPASy Swiss-Prot
Match: PR1C_HORVU (Pathogenesis-related protein 1C OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.075e-25 Identity = 56/109 (51.38%), Postives = 70/109 (64.22%), Query Frame = 3 Query: 93 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFS 416 F+I NNC T+W A +P GGG +L GQT +I GT+A RIWART C F+ G G C+TGDC G L C G P TLAE+ + + DF D+S IDGFN+ M+FS Sbjct: 23 FNIKNNCGSTIWPAGIPVGGGFELGSGQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCSLSGRPPATLAEFTIGGGSTQDFYDISVIDGFNLAMDFS 130
BLAST of CX292757 vs. ExPASy Swiss-Prot
Match: PR1A_HORVU (Pathogenesis-related protein 1A/1B OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.075e-25 Identity = 56/109 (51.38%), Postives = 70/109 (64.22%), Query Frame = 3 Query: 93 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFS 416 F+I NNC T+W A +P GGG +L GQT +I GT+A RIWART C F+ G G C+TGDC G L C G P TLAE+ + + DF D+S IDGFN+ M+FS Sbjct: 23 FNIKNNCGSTIWPAGIPVGGGFELGSGQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCSLSGQPPATLAEFTIGGGSTQDFYDISVIDGFNLAMDFS 130
BLAST of CX292757 vs. ExPASy Swiss-Prot
Match: TLP_WHEAT (Thaumatin-like protein PWIR2 OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.951e-25 Identity = 57/109 (52.29%), Postives = 69/109 (63.30%), Query Frame = 3 Query: 93 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFS 416 F+I NNC T+W A +P GGG L GQT +I GT+A RIWART C F+ G G C+TGDC G L C G P TLAEY + + DF D+S IDGFN+ M+FS Sbjct: 23 FNIKNNCGFTIWPAGIPVGGGFALGSGQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCSLSGRPPATLAEYTIGGGSTQDFYDISVIDGFNLAMDFS 130
BLAST of CX292757 vs. ExPASy Swiss-Prot
Match: RST4_AVESA (Thaumatin-like pathogenesis-related protein 4 OS=Avena sativa GN=RASTL-4 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.549e-24 Identity = 62/136 (45.59%), Postives = 82/136 (60.29%), Query Frame = 3 Query: 93 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVP 497 F ITNNC TVW AA+P GGG+QLD+GQTWT+ GT + RIW RT C F+ G G C+TGDC G L C G P TLAE+++ + D+ D+S ID +N+ M+FS S ++C + CP+ P Sbjct: 24 FTITNNCGYTVWPAAIPVGGGQQLDQGQTWTLNVPAGTNSGRIWGRTGCSFN-GGSGSCQTGDCAGALSCTLSG-QPATLAEFSIG--GEHDYYDISVIDVYNLAMDFSC---STGDALQCRDS---SCPDAYHQP 149
BLAST of CX292757 vs. ExPASy Swiss-Prot
Match: RST1_AVESA (Thaumatin-like pathogenesis-related protein 1 OS=Avena sativa GN=RASTL-1 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.449e-22 Identity = 66/146 (45.21%), Postives = 78/146 (53.42%), Query Frame = 3 Query: 93 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPG-----GCNG 512 F ITNNC TVW A +P GGG QL+ Q+ I GT A RIW RT C F+ +G+G C TGDC G L C G P TLAEY + DF D+S IDGFN+ M+FS S +KC CP+ P CNG Sbjct: 24 FRITNNCGFTVWPAGIPVGGGFQLNSKQSSNINVPAGTSAGRIWGRTGCSFN-NGRGSCATGDCAGALSCTLSG-QPATLAEYTIG--GSQDFYDISVIDGFNLAMDFSC---STGVALKCRD---ANCPDAYHHPNDVATHACNG 159
BLAST of CX292757 vs. ExPASy Swiss-Prot
Match: RST2_AVESA (Thaumatin-like pathogenesis-related protein 2 OS=Avena sativa GN=RASTL-2 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.229e-22 Identity = 65/146 (44.52%), Postives = 78/146 (53.42%), Query Frame = 3 Query: 93 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPG-----GCNG 512 F ITNNC TVW A +P GGG QL+ Q+ I GT A RIW RT C F+ +G+G C TGDC G L C G P TLAEY + DF D+S IDG+N+ M+FS S +KC CP+ P CNG Sbjct: 24 FRITNNCGFTVWPAGIPVGGGFQLNSKQSSNINVPAGTSAGRIWGRTGCSFN-NGRGSCATGDCAGALSCTLSG-QPATLAEYTIG--GSQDFYDISVIDGYNLAMDFSC---STGVALKCRD---ANCPDAYHHPNDVATHACNG 159
BLAST of CX292757 vs. ExPASy Swiss-Prot
Match: RST3_AVESA (Thaumatin-like pathogenesis-related protein 3 OS=Avena sativa GN=RASTL-3 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.217e-22 Identity = 65/146 (44.52%), Postives = 79/146 (54.11%), Query Frame = 3 Query: 93 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPG-----GCNG 512 F ITNNC TVW A +P GGG QL+ Q+ I GT A RIW RT C F+ +G+G C TGDC G L C G P TLAEY + DF D+S IDG+N+ M+FS S +KC + CP+ P CNG Sbjct: 24 FRITNNCGFTVWPAGIPVGGGFQLNSKQSSNINVPAGTSAGRIWGRTGCSFN-NGRGSCATGDCAGALSCTLSG-QPATLAEYTIG--GSQDFYDISVIDGYNLAMDFSC---STGVALKCRDS---GCPDAYHHPNDVATHACNG 159 The following BLAST results are available for this feature:
BLAST of CX292757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX292757 ID=CX292757; Name=CX292757; organism=Citrus clementina; type=EST; length=660bpback to top |