CX292822

Overview
NameCX292822
Unique NameCX292822
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length610
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292822 vs. ExPASy Swiss-Prot
Match: OS35_SOLCO (Osmotin-like protein OSML15 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.006e-52
Identity = 90/145 (62.07%), Postives = 108/145 (74.48%), Query Frame = 1
Query:    4 CETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRV--IKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPT-GTDYKVVFCP 429
            C+TGDC G+LEC+G+G  PNTLAEYAL QF+++DF D+S IDGFN+PM F   +P   +   I+C ANI GECP  L+VPGGCN PC  F   +YCC  G CGPT  S+FFK RCPD YSYP+DD TSTFTC +  TDYKV+FCP
Sbjct:   83 CQTGDCGGVLECKGWGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTNPGPGKCHPIQCVANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCQSWTTDYKVMFCP 227          
BLAST of CX292822 vs. ExPASy Swiss-Prot
Match: ZEAM_MAIZE (Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 2.620e-52
Identity = 92/146 (63.01%), Postives = 109/146 (74.66%), Query Frame = 1
Query:    4 CETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPS-CNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCC---NSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 429
            C TGDC G+L+C GYG APNTLAEYALKQFN++DF D+S IDGFNVPM F     S C+R  +C  ++   CP EL+  G CN  CPVFK DEYCC    + +C PT +S++FK +CPD YSYPKDDATSTFTCP GT+YKVVFCP
Sbjct:   82 CRTGDCGGVLQCTGYGRAPNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGSGCSRGPRCAVDVNARCPAELRQDGVCNNACPVFKKDEYCCVGSAANDCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 227          
BLAST of CX292822 vs. ExPASy Swiss-Prot
Match: OLPA_TOBAC (Osmotin-like protein OS=Nicotiana tabacum GN=OLPA PE=1 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 3.422e-52
Identity = 90/145 (62.07%), Postives = 108/145 (74.48%), Query Frame = 1
Query:    4 CETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRV--IKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPT-GTDYKVVFCP 429
            C+TGDC G+LEC+G+G  PNTLAEYAL QF+++DF D+S IDGFN+PM F    P   +   I+CTANI GECP  L+VPGGCN PC  F   +YCC  G CGPT  S++FK RCPD YSYP+DD TSTFTC +  TDYKV+FCP
Sbjct:   83 CQTGDCGGVLECKGWGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCP 227          
BLAST of CX292822 vs. ExPASy Swiss-Prot
Match: IAAT_MAIZE (Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.301e-51
Identity = 90/146 (61.64%), Postives = 108/146 (73.97%), Query Frame = 1
Query:    4 CETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPS-CNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCC---NSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 429
            C TGDC G+++C GYG APNTLAEYALKQFN++DF D+S +DGFNVP  F     S C+R  +C  ++   CP EL+  G CN  CPVFK DEYCC    + NC PT +S++FK +CPD YSYPKDDATSTFTCP GT+YKVVFCP
Sbjct:   61 CRTGDCGGVVQCTGYGRAPNTLAEYALKQFNNLDFFDISILDGFNVPYSFLPDGGSGCSRGPRCAVDVNARCPAELRQDGVCNNACPVFKKDEYCCVGSAANNCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 206          
BLAST of CX292822 vs. ExPASy Swiss-Prot
Match: THM2_THADA (Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.224e-43
Identity = 79/143 (55.24%), Postives = 103/143 (72.03%), Query Frame = 1
Query:    4 CETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGG-CNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 429
            C TGDC GLL+C+ +G  P TLAE++L Q+   D+ID+SNI GFNVPM+FS  +  C R ++C A+I+G+CP +LK PGG CN  C VF+T EYCC +G CGPT +S+FFK  CPD +SY  D  T T TCP  ++Y+V FCP
Sbjct:   88 CRTGDCGGLLQCKRFGRPPTTLAEFSLNQYGK-DYIDISNIKGFNVPMDFSPTTRGC-RGVRCAADIVGQCPAKLKAPGGGCNDACTVFQTSEYCCTTGKCGPTEYSRFFKRLCPDAFSYVLDKPT-TVTCPGSSNYRVTFCP 227          
BLAST of CX292822 vs. ExPASy Swiss-Prot
Match: THM1_THADA (Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 4.954e-43
Identity = 79/143 (55.24%), Postives = 102/143 (71.33%), Query Frame = 1
Query:    4 CETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGG-CNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 429
            C+TGDC GLL C+ +G  P TLAE++L Q+   D+ID+SNI GFNVPM FS  +  C R ++C A+I+G+CP +LK PGG CN  C VF+T EYCC +G CGPT +S+FFK  CPD +SY  D  T T TCP  ++Y+V FCP
Sbjct:   66 CKTGDCGGLLRCKRFGRPPTTLAEFSLNQYGK-DYIDISNIKGFNVPMNFSPTTRGC-RGVRCAADIVGQCPAKLKAPGGGCNDACTVFQTSEYCCTTGKCGPTEYSRFFKRLCPDAFSYVLDKPT-TVTCPGSSNYRVTFCP 205          
BLAST of CX292822 vs. ExPASy Swiss-Prot
Match: PRR3_JUNAS (Pathogenesis-related protein OS=Juniperus ashei PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 7.402e-39
Identity = 75/145 (51.72%), Postives = 94/145 (64.83%), Query Frame = 1
Query:    4 CETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSG---NCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 429
            C+TGDC G L C   GA P TLAEY     +D D+ D+S +DGFN+P+  +  +  C     C A+I   CP+ELKV GGCN  C VFKTD+YCC +    NC  T +SK FK++CP  YSY KDD T+TF C +GTDY +VFCP
Sbjct:   86 CQTGDCGGQLSCTVSGAVPATLAEYTQ---SDQDYYDVSLVDGFNIPLAINPTNAQCTAPA-CKADINAVCPSELKVDGGCNSACNVFKTDQYCCRNAYVDNCPATNYSKIFKNQCPQAYSYAKDD-TATFACASGTDYSIVFCP 225          
BLAST of CX292822 vs. ExPASy Swiss-Prot
Match: PR5_ARATH (Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.317e-29
Identity = 68/155 (43.87%), Postives = 86/155 (55.48%), Query Frame = 1
Query:    1 KCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEF--SSVSPSCNRVIKCTANILGECPNELKVPG-----GCNGPCPVFKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 429
            +C TGDC GL  C G G  P TLAE+ L      DF D+S +DG+NV +    S  S  C +   C +++   CP+ LKV        C   C  F TD+YCC   N     C PT +S+ FK+ CPD YSY  DD TSTFTC TG +Y++ FCP
Sbjct:   88 RCVTGDCGGL-RCNGGGVPPVTLAEFTLVGDGGKDFYDVSLVDGYNVKLGIRPSGGSGDC-KYAGCVSDLNAACPDMLKVMDQNNVVACKSACERFNTDQYCCRGANDKPETCPPTDYSRIFKNACPDAYSYAYDDETSTFTC-TGANYEITFCP 239          
BLAST of CX292822 vs. ExPASy Swiss-Prot
Match: TLP1_PYRPY (Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.310e-27
Identity = 67/158 (42.41%), Postives = 84/158 (53.16%), Query Frame = 1
Query:    1 KCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFS--SVSPSCNRVIKCTANILGECPNELKVPG------GCNGPCPVFKTDEYCCNSG-----NCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 429
            KC TGDC +G + C G GA+P  +L E  L      DF D+S +DGFN+P++ +    S  CN    C ANI   CP EL   G      GC   C      +YCC         C PT FSK FK++CP  YSY  DD +STFTC  G +Y++ FCP
Sbjct:   88 KCSTGDCGSGQISCNGAGASPPASLVELTLATNGGQDFYDVSLVDGFNLPIKLAPRGGSGDCNST-SCAANINTVCPAELSDKGSDGSVIGCKSACLALNQPQYCCTGAYGTPDTCPPTDFSKVFKNQCPQAYSYAYDDKSSTFTCFGGPNYEITFCP 244          
BLAST of CX292822 vs. ExPASy Swiss-Prot
Match: TLP1_CASSA (Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.601e-25
Identity = 60/156 (38.46%), Postives = 82/156 (52.56%), Query Frame = 1
Query:    4 CETGDCN-GLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN-RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCNSG-----NCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 429
            CET DC+ G + C G GA P  +L E  +     MDF D+S +DG+N+P+  ++   + + +   C AN+   CP EL+V G       C   C  F   +YCC         C  T +S+ FK +CP  YSY  DD+TSTFTC    DY + FCP
Sbjct:   88 CETADCSTGQVACNGNGAIPPASLVEINIAANRGMDFYDVSLVDGYNLPVSVATRGGTGDCKATSCRANVNAVCPAELQVKGSDASVLACKSACTAFNQPQYCCTGAFDTARTCPATKYSRIFKQQCPQAYSYAYDDSTSTFTCSGAPDYVITFCP 243          
The following BLAST results are available for this feature:
BLAST of CX292822 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
OS35_SOLCO2.006e-5262.07Osmotin-like protein OSML15 OS=Solanum commersonii... [more]
ZEAM_MAIZE2.620e-5263.01Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2[more]
OLPA_TOBAC3.422e-5262.07Osmotin-like protein OS=Nicotiana tabacum GN=OLPA ... [more]
IAAT_MAIZE1.301e-5161.64Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 S... [more]
THM2_THADA2.224e-4355.24Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1[more]
THM1_THADA4.954e-4355.24Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1[more]
PRR3_JUNAS7.402e-3951.72Pathogenesis-related protein OS=Juniperus ashei PE... [more]
PR5_ARATH5.317e-2943.87Pathogenesis-related protein 5 OS=Arabidopsis thal... [more]
TLP1_PYRPY1.310e-2742.41Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1... [more]
TLP1_CASSA1.601e-2538.46Thaumatin-like protein 1 OS=Castanea sativa GN=TL1... [more]

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Properties
Property NameValue
Genbank descriptionC04019H08SK FlavFr1 Citrus clementina cDNA clone C04019H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292822 ID=CX292822; Name=CX292822; organism=Citrus clementina; type=EST; length=610bp
AAATGCGAGACCGGTGACTGTAACGGACTCCTCGAGTGCCAAGGCTACGG
TGCAGCACCTAACACCTTGGCCGAGTACGCGTTGAAGCAATTCAATGACA
TGGATTTCATTGACATGTCCAACATTGACGGATTCAATGTTCCCATGGAA
TTTAGCTCTGTCTCTCCCTCATGCAACCGCGTGATCAAGTGCACTGCTAA
CATTCTTGGCGAGTGCCCGAATGAATTGAAGGTTCCTGGAGGATGTAACG
GGCCGTGCCCCGTGTTCAAGACCGACGAGTACTGTTGCAATTCAGGCAAC
TGCGGACCTACAGGTTTCTCCAAGTTTTTCAAGGATAGGTGCCCGGATGT
TTACAGTTACCCTAAGGATGACGCTACCAGCACATTTACTTGCCCGACTG
GGACAGACTACAAGGTTGTATTCTGCCCCTGAAGCATTTTTTTTCAGGGG
TAGAAATGGAAATAGAAAACTATACGACATAGCCTTCTATATCTGTTATA
ATATTGGAATAAGGACCGTGTGGTCTTCACTGCCATAGAGCTGGAGCAGG
CACATGTAGTTATGTGCGTGTATGAACTATAATTTGTTCGTGAATTAAAA
GGAGAATAAC
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