CX292859
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292859 vs. ExPASy Swiss-Prot
Match: RIBBA_SYNWW (Riboflavin biosynthesis protein ribBA OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=ribBA PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.087e-52 Identity = 102/158 (64.56%), Postives = 123/158 (77.85%), Query Frame = 1 Query: 19 QGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 492 +G+ + + ILVRVHSECLTGD+FGS RCDCG+QL AM I + G+GVL+Y+R EGRGIGL +K++AY LQD+GRDTVEAN ELG P D R+YGIGAQ+L DLGVR M+LMTNNP K GL+GYGL V RV + P K EN RYL TK+ KMGH+ Sbjct: 238 KGEWEEDEPILVRVHSECLTGDVFGSRRCDCGEQLETAMSMIASEGKGVLLYMR-QEGRGIGLLNKIKAYKLQDNGRDTVEANLELGFPADLRDYGIGAQILVDLGVRKMRLMTNNPKKIRGLEGYGLEVVERVAIEMPHKPENTRYLRTKKEKMGHL 394
BLAST of CX292859 vs. ExPASy Swiss-Prot
Match: RIBBA_CORGL (Riboflavin biosynthesis protein ribBA OS=Corynebacterium glutamicum GN=ribBA PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.087e-52 Identity = 96/158 (60.76%), Postives = 128/158 (81.01%), Query Frame = 1 Query: 22 GDIGD--GQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGH 489 GD+ G+++LVRVHSECLTGD+FGS RCDCG QL +++ I+ AGRGV+VY+RGHEGRGIGL KLRAY LQD+G DTV+AN LGLP D+RE+G AQ+L DLGVR++ L++NNP+K VGL+G+G+++A R P+ + ++N RYL+TKR +MGH Sbjct: 250 GDVASDGGENVLVRVHSECLTGDVFGSRRCDCGQQLHESLRLIQEAGRGVVVYMRGHEGRGIGLLAKLRAYQLQDEGADTVDANLALGLPADAREFGTSAQILYDLGVRSLNLISNNPAKKVGLEGHGISIASRTPIPVAVHEDNVRYLKTKRDRMGH 407
BLAST of CX292859 vs. ExPASy Swiss-Prot
Match: RIBBA_CORGB (Riboflavin biosynthesis protein ribBA OS=Corynebacterium glutamicum (strain R) GN=ribBA PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.087e-52 Identity = 96/158 (60.76%), Postives = 128/158 (81.01%), Query Frame = 1 Query: 22 GDIGD--GQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGH 489 GD+ G+++LVRVHSECLTGD+FGS RCDCG QL +++ I+ AGRGV+VY+RGHEGRGIGL KLRAY LQD+G DTV+AN LGLP D+RE+G AQ+L DLGVR++ L++NNP+K VGL+G+G+++A R P+ + ++N RYL+TKR +MGH Sbjct: 250 GDVASDGGENVLVRVHSECLTGDVFGSRRCDCGQQLHESLRLIQEAGRGVVVYMRGHEGRGIGLLAKLRAYQLQDEGADTVDANLALGLPADAREFGTSAQILYDLGVRSLNLISNNPAKKVGLEGHGISIASRTPIPVAVHEDNVRYLKTKRDRMGH 407
BLAST of CX292859 vs. ExPASy Swiss-Prot
Match: RIBBA_PELLD (Riboflavin biosynthesis protein ribBA OS=Pelodictyon luteolum (strain DSM 273) GN=ribBA PE=3 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.855e-52 Identity = 100/158 (63.29%), Postives = 124/158 (78.48%), Query Frame = 1 Query: 19 QGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 492 +GD+ G+ +LVRVHS+C TGD F S RCDCG+QLA A++ IE GRGVLVYL EGRGIGL +KL+AYNLQD+G DTVEANE+LG D R+YGIGAQ+L+DLGVR M+L+TNNP K +GL+GYGL + R+PL + N+ YLETKR KMGH+ Sbjct: 244 KGDVSSGEPVLVRVHSQCATGDTFASLRCDCGNQLASALRMIEKEGRGVLVYLM-QEGRGIGLINKLKAYNLQDEGFDTVEANEQLGFKADLRDYGIGAQILQDLGVRKMRLLTNNPKKVIGLEGYGLEIVERLPLEIAPNEVNQFYLETKRDKMGHM 400
BLAST of CX292859 vs. ExPASy Swiss-Prot
Match: RIBBA_BACSU (Riboflavin biosynthesis protein ribBA OS=Bacillus subtilis GN=ribBA PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.164e-52 Identity = 103/158 (65.19%), Postives = 124/158 (78.48%), Query Frame = 1 Query: 22 GDIGDGQD-ILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 492 GD+ G++ +LVRVHSECLTGD+FGS RCDCG QL A+ QI A GRGVL+YLR EGRGIGL +KL+AY LQ+ G DTVEANE LG D R YGIGAQ+LRDLGVR MKL+TNNP K GL+GYGL+++ RVPL K+ NK+YL+TK K+GH+ Sbjct: 239 GDVPFGEEPVLVRVHSECLTGDVFGSHRCDCGPQLHAALNQIAAEGRGVLLYLR-QEGRGIGLINKLKAYKLQEQGYDTVEANEALGFLPDLRNYGIGAQILRDLGVRNMKLLTNNPRKIAGLEGYGLSISERVPLQMEAKEHNKKYLQTKMNKLGHL 395
BLAST of CX292859 vs. ExPASy Swiss-Prot
Match: RIBBA_PELPB (Riboflavin biosynthesis protein ribBA OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=ribBA PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 9.205e-52 Identity = 101/160 (63.12%), Postives = 121/160 (75.62%), Query Frame = 1 Query: 19 QGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYG 498 +GD+ + +LVRVHS+C TGD F S RCDCG+QLA A+ IE GRGVL+YL EGRGIGL +KL+AYNLQD G DTVEANE+LG D R+YGIGAQ+L+DLGVR MKLMTNNP K VGL+GYGL + RVPL N+ YL+TKR K+GH+ G Sbjct: 244 KGDVTTDEPVLVRVHSQCATGDTFASLRCDCGNQLASALTMIEKEGRGVLIYLM-QEGRGIGLINKLKAYNLQDQGYDTVEANEKLGFKADLRDYGIGAQILKDLGVRKMKLMTNNPKKVVGLEGYGLEIVERVPLEMASNPMNQFYLDTKRDKLGHMIG 402
BLAST of CX292859 vs. ExPASy Swiss-Prot
Match: RIBBA_CLONN (Riboflavin biosynthesis protein ribBA OS=Clostridium novyi (strain NT) GN=ribBA PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 5.966e-51 Identity = 94/163 (57.67%), Postives = 124/163 (76.07%), Query Frame = 1 Query: 19 QGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGLES 507 +GDI +G+ +L+RVHSECLTGD+ GS RCDCGDQLA A++QI GRG L+Y+R EGRGIGL +K++AY LQD+G DTV+AN LG P D R+YGIGAQ+L+DLGV ++LMTNNP K G+ GYG+ + RVP+ K+N+ YL TK+ +MGHI ++ Sbjct: 242 KGDIKNGEPVLIRVHSECLTGDVLGSLRCDCGDQLAQALRQINKEGRGALLYMR-QEGRGIGLINKIKAYKLQDNGMDTVDANLALGFPEDLRDYGIGAQILKDLGVEKVRLMTNNPKKVSGISGYGIEIVERVPIEIECNKKNEFYLRTKKERMGHILNFKN 403
BLAST of CX292859 vs. ExPASy Swiss-Prot
Match: RIBA_BURMA (GTP cyclohydrolase-2 OS=Burkholderia mallei GN=ribA PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 6.597e-50 Identity = 92/158 (58.23%), Postives = 121/158 (76.58%), Query Frame = 1 Query: 22 GDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIY 495 GD+ + +L R+HSECLTGD+FGS RCDCG+QL L+++ I A GRGVL+YLRGHEGRGIGL +K+RAY LQ+ GRDTVEAN +LGLP D+REY A +LR L V +++LM+NNP K+ L +G+ V RV L P+++EN+RY+ TK+ K GH Y Sbjct: 36 GDVAEQPSVLTRLHSECLTGDVFGSYRCDCGEQLDLSLRYIAAEGRGVLLYLRGHEGRGIGLSNKIRAYALQEQGRDTVEANLDLGLPDDAREYDSAAAILRILKVTSVRLMSNNPKKFDTLARHGIPVCERVALAVPVREENERYIRTKQLKFGHYY 193
BLAST of CX292859 vs. ExPASy Swiss-Prot
Match: RIBBA_AQUAE (Riboflavin biosynthesis protein ribBA OS=Aquifex aeolicus GN=ribBA PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.125e-49 Identity = 94/158 (59.49%), Postives = 119/158 (75.32%), Query Frame = 1 Query: 22 GDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIY 495 G+ + + +LVRVHSECLTGD+F S RCDC QL A++ I G+GVLVY+ GHEGRGIG+ +K++AY LQ+ G DTVEANE+LG P D R+YGIGAQ+LRDLGVR MKLMTNNP K V L+G+GL V RVP+ NK YL+ K+ K+GH++ Sbjct: 249 GEWKEDEPVLVRVHSECLTGDVFRSFRCDCRPQLEKALEMIAKEGKGVLVYILGHEGRGIGIANKIKAYELQEKGYDTVEANEKLGYPPDLRDYGIGAQILRDLGVRKMKLMTNNPRKIVALEGFGLEVVERVPIKIEPNPYNKIYLQVKKDKLGHMF 406
BLAST of CX292859 vs. ExPASy Swiss-Prot
Match: RIBBA_BACAM (Riboflavin biosynthesis protein ribBA OS=Bacillus amyloliquefaciens GN=ribBA PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 5.584e-49 Identity = 96/149 (64.43%), Postives = 116/149 (77.85%), Query Frame = 1 Query: 46 ILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 492 +LVRVHSECLTGD+F S RCDCG QL A++QI GRGVL+YLR EGRGIGL +KL+AY LQ+ G DTVEANE LG D R YGIGAQ+LRDLGV+ MKL+TNNP K GL+GYGL+++ RVPL + NK+YL+TK K+GH+ Sbjct: 248 VLVRVHSECLTGDVFASHRCDCGPQLHAALRQIAEEGRGVLLYLR-QEGRGIGLINKLKAYRLQEQGYDTVEANEALGFLPDLRNYGIGAQILRDLGVQHMKLLTNNPRKIAGLEGYGLSISDRVPLQMEASEHNKQYLQTKMKKLGHL 395 The following BLAST results are available for this feature:
BLAST of CX292859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 215
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292859 ID=CX292859; Name=CX292859; organism=Citrus clementina; type=EST; length=676bpback to top |