CX292859
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292859 vs. ExPASy Swiss-Prot
Match: RIBBA_CORAM (Riboflavin biosynthesis protein ribBA OS=Corynebacterium ammoniagenes GN=ribBA PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 9.857e-46 Identity = 84/155 (54.19%), Postives = 113/155 (72.90%), Query Frame = 1 Query: 25 DIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGH 489 ++ +D+ VRVHSECLTGD+F S RCDCG QL +M+ I+ AG+G+++YLRGHEGRGIGL KL+AY+LQD G DTV+AN E GLP D+REY + Q+LRDLG+++ L+TNNP K GL+G+G+ + P+ +N YL TKR +M H Sbjct: 254 ELNGAEDVFVRVHSECLTGDVFHSRRCDCGQQLHQSMEIIQEAGQGIIIYLRGHEGRGIGLLAKLKAYSLQDSGLDTVDANLEQGLPEDAREYSVAGQILRDLGIKSANLLTNNPHKGEGLRGFGVEASAHTPVEIEPNADNIDYLRTKRDRMNH 408
BLAST of CX292859 vs. ExPASy Swiss-Prot
Match: RIBBA_BACFR (Riboflavin biosynthesis protein ribBA OS=Bacteroides fragilis GN=ribBA PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.681e-45 Identity = 87/150 (58.00%), Postives = 114/150 (76.00%), Query Frame = 1 Query: 40 QDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGH 489 + ILVRVHS C+TGDIFGS RC+CG+QL AM+ IEAAG+GV+VY+ EGRGIGL +K+ AY LQ++G DTV+AN LG D R+YG+GAQ+LR++GV+ MKLMTNNP K +GL+ YGL + V + N+RYL+TK+ +MGH Sbjct: 250 EPILVRVHSSCMTGDIFGSCRCECGEQLHKAMEMIEAAGKGVIVYMN-QEGRGIGLMNKIAAYKLQEEGYDTVDANLHLGFDADERDYGVGAQILREIGVKKMKLMTNNPVKRIGLEAYGLEITENVGIEIKPNPYNERYLKTKKDRMGH 398
BLAST of CX292859 vs. ExPASy Swiss-Prot
Match: RIBBA_BACFN (Riboflavin biosynthesis protein ribBA OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=ribBA PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.681e-45 Identity = 87/150 (58.00%), Postives = 114/150 (76.00%), Query Frame = 1 Query: 40 QDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGH 489 + ILVRVHS C+TGDIFGS RC+CG+QL AM+ IEAAG+GV+VY+ EGRGIGL +K+ AY LQ++G DTV+AN LG D R+YG+GAQ+LR++GV+ MKLMTNNP K +GL+ YGL + V + N+RYL+TK+ +MGH Sbjct: 250 EPILVRVHSSCMTGDIFGSCRCECGEQLHKAMEMIEAAGKGVIVYMN-QEGRGIGLMNKIAAYKLQEEGYDTVDANLHLGFDADERDYGVGAQILREIGVKKMKLMTNNPVKRIGLEAYGLEITENVGIEIKPNPYNERYLKTKKDRMGH 398
BLAST of CX292859 vs. ExPASy Swiss-Prot
Match: RIBBA_UNCTG (Riboflavin biosynthesis protein ribBA OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=ribBA PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.746e-45 Identity = 88/158 (55.70%), Postives = 117/158 (74.05%), Query Frame = 1 Query: 19 QGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 492 +G + + Q++LVRVHS C TGDIF S RCDCGDQL A++ + A +GV++Y+ EGRGIGL +KL+AY LQ+ G DTVEAN+ LG D R+YGIGAQML +LG++++ LMTNNP K GL+ YGL + RVPL K N++YL+TK+ KMGH+ Sbjct: 243 KGVVKNRQNVLVRVHSSCETGDIFHSLRCDCGDQLETALKAVGEAEQGVVLYIH-QEGRGIGLANKLKAYRLQEKGMDTVEANKALGFDPDLRDYGIGAQMLSELGIKSINLMTNNPGKINGLESYGLKITKRVPLEISPSKSNEKYLKTKKEKMGHM 399
BLAST of CX292859 vs. ExPASy Swiss-Prot
Match: RIBBA_BACTN (Riboflavin biosynthesis protein ribBA OS=Bacteroides thetaiotaomicron GN=ribBA PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.746e-45 Identity = 91/157 (57.96%), Postives = 113/157 (71.97%), Query Frame = 1 Query: 19 QGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGH 489 +G + + ILVRVHS C TGDI GS RCDCG+QL AM+ IE G+GV+VYL EGRGIGL K++AY LQ+DG DTV+AN LG D R+YG+GAQ+LR+LGV MKL+TNNP K VGL+ YGL + VP+ T N+RYL TK+ +MGH Sbjct: 243 KGTWNEDEPILVRVHSSCATGDILGSHRCDCGEQLHKAMEMIEKEGKGVVVYLN-QEGRGIGLMEKMKAYKLQEDGMDTVDANLCLGHLADERDYGVGAQILRELGVHKMKLLTNNPVKRVGLEAYGLEIVENVPVETVPNPYNERYLRTKKERMGH 398
BLAST of CX292859 vs. ExPASy Swiss-Prot
Match: RIBA_PSEPK (GTP cyclohydrolase-2 OS=Pseudomonas putida (strain KT2440) GN=ribA PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.389e-45 Identity = 94/166 (56.63%), Postives = 110/166 (66.27%), Query Frame = 1 Query: 22 GDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGLESNGRL 519 GDI DGQ +L R+HSECLTGD S RCDCG QL A+Q I GRGVL+YLR EGRGIGL +K+RAY LQD G DTVEANE LG D R+Y I ML LGV++++LMTNNP K L + VA RVPL T N+ YL TK K+GH+ G E G + Sbjct: 38 GDIADGQPVLGRLHSECLTGDALFSQRCDCGSQLEAALQAIAREGRGVLLYLR-QEGRGIGLLNKIRAYELQDGGADTVEANERLGFAADQRDYAICLPMLEHLGVKSLRLMTNNPRKVKALTDMNIVVAERVPLHTGHNPHNRYYLATKAGKLGHMLGNEHQGEV 202
BLAST of CX292859 vs. ExPASy Swiss-Prot
Match: RIBA_PSEP1 (GTP cyclohydrolase-2 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=ribA PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.389e-45 Identity = 94/166 (56.63%), Postives = 110/166 (66.27%), Query Frame = 1 Query: 22 GDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGLESNGRL 519 GDI DGQ +L R+HSECLTGD S RCDCG QL A+Q I GRGVL+YLR EGRGIGL +K+RAY LQD G DTVEANE LG D R+Y I ML LGV++++LMTNNP K L + VA RVPL T N+ YL TK K+GH+ G E G + Sbjct: 38 GDIADGQPVLGRLHSECLTGDALFSQRCDCGSQLEAALQAIAREGRGVLLYLR-QEGRGIGLLNKIRAYELQDGGADTVEANERLGFAADQRDYAICLPMLEHLGVKSLRLMTNNPRKVKALTDMNIVVAERVPLHTGHNPHNRYYLATKAGKLGHMLGNEHQGEV 202
BLAST of CX292859 vs. ExPASy Swiss-Prot
Match: RIBBA_CYTH3 (Riboflavin biosynthesis protein ribBA OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=ribBA PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.090e-44 Identity = 86/150 (57.33%), Postives = 109/150 (72.67%), Query Frame = 1 Query: 40 QDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGH 489 + ++VRVHS C+TGDIFGS RCDCG QL AM+ I+ G+GV++Y+ EGRGIGL +KL+AY LQ+ GRDTVEAN ELG +D R+YG GAQ+LRDL + ++L+TNNP K L GYGL + VP+ P N YL+TKR KMGH Sbjct: 251 EPVMVRVHSSCVTGDIFGSCRCDCGPQLHKAMEMIQQEGKGVILYMN-QEGRGIGLLNKLKAYKLQEQGRDTVEANLELGFKMDQRDYGTGAQILRDLNISKLRLITNNPVKRAALAGYGLEITEAVPIEIPSNPHNLEYLKTKRDKMGH 399
BLAST of CX292859 vs. ExPASy Swiss-Prot
Match: RIBA_PSEPG (GTP cyclohydrolase-2 OS=Pseudomonas putida (strain GB-1) GN=ribA PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.859e-44 Identity = 93/164 (56.71%), Postives = 109/164 (66.46%), Query Frame = 1 Query: 22 GDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGLESNG 513 GDI DGQ +L R+HSECLTGD S RCDCG QL A+Q I GRGVL+YLR EGRGIGL +K+RAY LQD G DTVEANE LG D R+Y + ML LGV++++LMTNNP K L + VA RVPL T N+ YL TK K+GH+ G E G Sbjct: 38 GDIADGQPVLGRLHSECLTGDALFSQRCDCGSQLEAALQAIAREGRGVLLYLR-QEGRGIGLLNKIRAYELQDGGADTVEANERLGFAADQRDYAMCLPMLEHLGVKSLRLMTNNPRKVKALTDMNIVVAERVPLHTGHNPHNRYYLATKAGKLGHMLGNEHQG 200
BLAST of CX292859 vs. ExPASy Swiss-Prot
Match: RIBA_PSEFS (GTP cyclohydrolase-2 OS=Pseudomonas fluorescens (strain SBW25) GN=ribA PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.859e-44 Identity = 95/166 (57.23%), Postives = 109/166 (65.66%), Query Frame = 1 Query: 22 GDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGLESNGRL 519 GDI DG +L RVHSECLTGD S RCDCG QL AM+ I GRGVL+YLR EGRGIGL +K+RAY LQD G DTVEANE LG D R+Y I ML LGV +++LMTNNP K L G+ VA RVPL T NK YL TK +K+ H+ G E G + Sbjct: 38 GDIADGAPVLGRVHSECLTGDALFSQRCDCGSQLEAAMRAIAREGRGVLLYLR-QEGRGIGLMNKIRAYELQDGGADTVEANERLGFAADQRDYAICLPMLEHLGVSSLRLMTNNPRKVKALTEMGITVAERVPLHTGHNPHNKLYLATKASKLDHMMGNEHQGEV 202 The following BLAST results are available for this feature:
BLAST of CX292859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 215
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292859 ID=CX292859; Name=CX292859; organism=Citrus clementina; type=EST; length=676bpback to top |