CX292859
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292859 vs. ExPASy Swiss-Prot
Match: RIBA_PSESM (GTP cyclohydrolase-2 OS=Pseudomonas syringae pv. tomato GN=ribA PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.428e-44 Identity = 93/161 (57.76%), Postives = 109/161 (67.70%), Query Frame = 1 Query: 22 GDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGLE 504 GD+ DG +L RVHSECLTGD S RCDCG QL AM+ I GRGVL+YLR EGRGIGL +K+RAY LQD G DTVEANE LG D R+Y I ML+ LGV++++LMTNNP K L G+ VA RVPL T N+ YL TK K+GH+ G E Sbjct: 38 GDVADGAPVLGRVHSECLTGDALFSQRCDCGSQLEAAMRAIATEGRGVLLYLR-QEGRGIGLMNKIRAYELQDGGADTVEANERLGFAADQRDYAICLPMLQHLGVQSLRLMTNNPRKVKALTDMGINVAERVPLHTGQNPHNRLYLATKAGKLGHMMGNE 197
BLAST of CX292859 vs. ExPASy Swiss-Prot
Match: RIBA_NEIMA (GTP cyclohydrolase-2 OS=Neisseria meningitidis serogroup A GN=ribA PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.428e-44 Identity = 87/157 (55.41%), Postives = 112/157 (71.34%), Query Frame = 1 Query: 22 GDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 492 GD DG +L R+HSECLTGD S +CDCG QL AM+ ++A GRG++VYLR EGRGIGL +K+RAY+LQD G DTVEAN LGLPVD+R++ + + LG+R++KL+TNNP K LK G+ V R+PL ENKRYL+TK K+GH+ Sbjct: 39 GDCSDGNPVLTRIHSECLTGDALFSKKCDCGPQLEAAMKAVQAEGRGIIVYLR-QEGRGIGLINKIRAYHLQDQGMDTVEANVALGLPVDARDFRLAQSIYEYLGIRSVKLLTNNPEKIQTLKDAGINVVERIPLHVGENLENKRYLQTKADKLGHL 194
BLAST of CX292859 vs. ExPASy Swiss-Prot
Match: RIBA_AZOVD (GTP cyclohydrolase-2 OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=ribA PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.428e-44 Identity = 92/166 (55.42%), Postives = 111/166 (66.87%), Query Frame = 1 Query: 22 GDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGLESNGRL 519 G + DG +L R+HSECLTGD S RCDCG QL A++ I A GRGVL+YLR EGRGIGL +K+RAY LQD G DTVEANE LG D R+YGI ML LG+ +KLMTNNP K L+G G+ V RVPL T + N++YL TK K+GH+ G G + Sbjct: 38 GTVDDGAPVLGRLHSECLTGDALFSLRCDCGFQLEAALRAIAAEGRGVLLYLR-QEGRGIGLLNKIRAYKLQDAGADTVEANERLGFRADQRDYGICKPMLEHLGITAIKLMTNNPRKVKALEGAGIQVTERVPLQTGLNPHNQKYLATKAGKLGHLLGSLHQGEV 202
BLAST of CX292859 vs. ExPASy Swiss-Prot
Match: RIBA_PSEPW (GTP cyclohydrolase-2 OS=Pseudomonas putida (strain W619) GN=ribA PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.171e-44 Identity = 93/166 (56.02%), Postives = 110/166 (66.27%), Query Frame = 1 Query: 22 GDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGLESNGRL 519 GDI DG+ +L R+HSECLTGD S RCDCG QL A+Q I GRGVL+YLR EGRGIGL +K+RAY LQD G DTVEANE LG D R+Y I ML LGV++++LMTNNP K L + VA RVPL T N+ YL TK K+GH+ G E G + Sbjct: 38 GDIADGEPVLGRLHSECLTGDALFSQRCDCGSQLEAALQAIAREGRGVLLYLR-QEGRGIGLLNKIRAYELQDGGADTVEANERLGFAADQRDYAICLPMLEHLGVKSLRLMTNNPRKVKALTDMNIKVAERVPLHTGHNPHNRYYLATKADKLGHMLGNEHQGEV 202
BLAST of CX292859 vs. ExPASy Swiss-Prot
Match: RIBA_ARCFU (GTP cyclohydrolase-2 OS=Archaeoglobus fulgidus GN=ribA PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 5.409e-44 Identity = 87/158 (55.06%), Postives = 116/158 (73.42%), Query Frame = 1 Query: 19 QGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 492 +G + +G D+LVR+HSECLTGD+F S RCDCGDQL A++ I+ G+GV +Y+RGHEGRGIGL +KL AY LQ++G+DTV+AN ELG P D R YGI AQ+L DL V++++L+TNNP K LK YG + R P+ + N YL+ K+ KMGH+ Sbjct: 218 KGRVDEG-DVLVRIHSECLTGDVFHSLRCDCGDQLENALKMIDREGKGVAIYMRGHEGRGIGLINKLMAYKLQEEGKDTVDANIELGFPPDMRSYGIAAQILMDLKVKSIRLLTNNPLKIEELKKYGFKIV-REPIEVEPCEVNLPYLKAKKDKMGHL 373
BLAST of CX292859 vs. ExPASy Swiss-Prot
Match: RIBBA_THEPX (Riboflavin biosynthesis protein ribBA OS=Thermoanaerobacter sp. (strain X514) GN=ribBA PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.055e-43 Identity = 90/158 (56.96%), Postives = 116/158 (73.42%), Query Frame = 1 Query: 19 QGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 492 +GD+ + +LVR+HSECLTGDI GS RCDCGDQL AM++I G G+LVYLR EGRGIGL +K++AY+LQD G DTVEAN +LG P D REY I AQ+L+D+GV+ +++MTNNP K L YGL V RV + N++YL+TK+ KMGH+ Sbjct: 238 KGDVNK-EPVLVRIHSECLTGDILGSLRCDCGDQLHAAMERIGQEG-GILVYLR-QEGRGIGLLNKIKAYHLQDQGLDTVEANIKLGFPPDLREYNIAAQILKDIGVKKIRIMTNNPQKITELSDYGLDVVERVSIEICPNHYNEKYLKTKKEKMGHL 392
BLAST of CX292859 vs. ExPASy Swiss-Prot
Match: RIBBA_THEP3 (Riboflavin biosynthesis protein ribBA OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=ribBA PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.055e-43 Identity = 91/158 (57.59%), Postives = 117/158 (74.05%), Query Frame = 1 Query: 19 QGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 492 +GDI + +LVR+HSECLTGDI GS RCDCGDQL AM++I G GVLVYLR EGRGIGL +K++AY+LQD G DTVEAN +LG P D REY I AQ+L+D+GV+ +++MTNNP K + L YGL V RV + N++YL+TK+ +MGH+ Sbjct: 238 KGDINK-EPVLVRIHSECLTGDILGSLRCDCGDQLHAAMERIGQEG-GVLVYLR-QEGRGIGLLNKIKAYHLQDQGLDTVEANIKLGFPPDLREYSIAAQILKDIGVKKIRIMTNNPQKIMELSDYGLDVVERVSIEICPNHYNEKYLKTKKERMGHL 392
BLAST of CX292859 vs. ExPASy Swiss-Prot
Match: RIBBA_PARD8 (Riboflavin biosynthesis protein ribBA OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=ribBA PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.055e-43 Identity = 86/158 (54.43%), Postives = 113/158 (71.52%), Query Frame = 1 Query: 19 QGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 492 +G + ILVRVHS C TGDIFGS RC+CG+QL AM++I+ G+GV+VYL EGRGIGL K++AY LQ+DG DTV+AN LG D R+YG+GAQ+LR +GV M+LM+NNP K VGL+ YGL V VP+ N+ Y++TK+ +MGH+ Sbjct: 244 KGKFEKDEPILVRVHSSCATGDIFGSMRCECGEQLHEAMRRIDQEGKGVIVYLN-QEGRGIGLMEKMKAYKLQEDGLDTVDANLHLGHQADERDYGVGAQILRHIGVTKMRLMSNNPVKRVGLEAYGLEVVENVPIEVKPNPYNEFYMKTKKERMGHV 400
BLAST of CX292859 vs. ExPASy Swiss-Prot
Match: RIBA_PSEE4 (GTP cyclohydrolase-2 OS=Pseudomonas entomophila (strain L48) GN=ribA PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.055e-43 Identity = 91/166 (54.82%), Postives = 110/166 (66.27%), Query Frame = 1 Query: 22 GDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGLESNGRL 519 GDI DG+ +L R+HSECLTGD S RCDCG QL A+Q I GRGVL+YLR EGRGIGL +K+RAY LQD G DTVEANE LG D R+Y + ML LGV++++LMTNNP K L + VA RVPL T N+ YL TK K+GH+ G + G + Sbjct: 38 GDIADGEPVLGRLHSECLTGDALFSQRCDCGSQLEAALQAIAREGRGVLLYLR-QEGRGIGLLNKIRAYELQDGGADTVEANERLGFAADQRDYAMCLPMLEHLGVKSLRLMTNNPRKVKALTDMSIKVAERVPLHTGHNPHNRLYLATKADKLGHMMGNKHQGEV 202
BLAST of CX292859 vs. ExPASy Swiss-Prot
Match: RIBA_NEIMF (GTP cyclohydrolase-2 OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=ribA PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.684e-43 Identity = 85/157 (54.14%), Postives = 111/157 (70.70%), Query Frame = 1 Query: 22 GDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 492 G+ DG +L R+HSECLTGD S +CDCG QL AM+ ++ GRG++VYLR EGRGIGL +K+RAY+LQD G DTVEAN LGLPVD+R++ + + LG+R++KL+TNNP K LK G+ V R+PL ENKRYL+TK K+GH+ Sbjct: 39 GNFSDGNPVLTRIHSECLTGDALFSRKCDCGPQLEAAMRAVQTEGRGIIVYLR-QEGRGIGLINKIRAYHLQDQGMDTVEANLALGLPVDARDFRLAQSIYEYLGIRSVKLLTNNPEKIQTLKDAGINVVERIPLHVGENLENKRYLQTKADKLGHL 194 The following BLAST results are available for this feature:
BLAST of CX292859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 215
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292859 ID=CX292859; Name=CX292859; organism=Citrus clementina; type=EST; length=676bpback to top |