CX292952

Overview
NameCX292952
Unique NameCX292952
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length430
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292952 vs. ExPASy Swiss-Prot
Match: APX5_ARATH (L-ascorbate peroxidase 5, peroxisomal OS=Arabidopsis thaliana GN=APX5 PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 2.410e-23
Identity = 53/88 (60.23%), Postives = 58/88 (65.91%), Query Frame = 1
Query:    4 LSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYFXXXXXXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELG 267
            LSGGHTLGR HKERS FEGPWT +PL FDNSYF               +DKALL+DP F P V+ YA DED  F  YA +H KLSELG
Sbjct:  154 LSGGHTLGRAHKERSDFEGPWTQDPLKFDNSYFVELLKGETPGLLQLKTDKALLDDPKFHPFVKLYAKDEDMFFKAYAISHKKLSELG 241          
BLAST of CX292952 vs. ExPASy Swiss-Prot
Match: CCPR2_CRYNE (Putative heme-binding peroxidase OS=Cryptococcus neoformans GN=CNE03890 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.557e-20
Identity = 48/88 (54.55%), Postives = 55/88 (62.50%), Query Frame = 1
Query:    4 LSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYFXXXXXXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELG 267
            LSG H LGRCH +RSGF+GPW  NP  F N YF              P+D AL+EDP FRP VEKYAAD++  F D+A A  KL ELG
Sbjct:  165 LSGAHNLGRCHADRSGFDGPWVVNPTRFSNQYF--KLLLPGTRLMMLPTDMALIEDPSFRPWVEKYAADQNLFFKDFANAFGKLIELG 250          
BLAST of CX292952 vs. ExPASy Swiss-Prot
Match: CCPR2_EMENI (Putative heme-binding peroxidase OS=Emericella nidulans GN=AN5440 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.854e-16
Identity = 44/111 (39.64%), Postives = 55/111 (49.55%), Query Frame = 1
Query:    4 LSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF-----------------------XXXXXXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELG 267
            L+GGH LGRCH +RSGF+GPW NNP  F N +F                                     P+D AL +DP FRP VE+YA D+D  F  +++A  KL ELG
Sbjct:  158 LAGGHNLGRCHADRSGFQGPWVNNPTRFSNQFFKLLLNMEWKPKTLENGVSQFVYIDPEAEDHEEPLMMLPTDVALRDDPAFRPWVERYAKDKDLFFDHFSKAFAKLIELG 268          
BLAST of CX292952 vs. ExPASy Swiss-Prot
Match: CCPR_GIBZE (Cytochrome c peroxidase, mitochondrial OS=Gibberella zeae GN=CCP1 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.727e-16
Identity = 44/104 (42.31%), Postives = 53/104 (50.96%), Query Frame = 1
Query:    4 LSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF----------------XXXXXXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELG 267
            LSG H LGRCH +RSG+ GPWT +P +  N YF                              PSD AL+ED  F+P VEKYA D DA F D++   L+L ELG
Sbjct:  235 LSGAHALGRCHTDRSGYSGPWTFSPTVLTNDYFRLLVEEKWQWKKWNGPAQYEDKSTKSLMMLPSDIALIEDKKFKPWVEKYAKDNDAFFKDFSNVVLRLFELG 338          
BLAST of CX292952 vs. ExPASy Swiss-Prot
Match: CCPR2_USTMA (Putative heme-binding peroxidase OS=Ustilago maydis GN=CCP2 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.727e-16
Identity = 45/110 (40.91%), Postives = 53/110 (48.18%), Query Frame = 1
Query:    4 LSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF----------------------XXXXXXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELG 267
            LSG H LGRCH +RSGFEGPW N+P  F N Y+                                    P+D AL++D   RP VEKYA D DA F D+A+   KL ELG
Sbjct:  158 LSGAHNLGRCHSDRSGFEGPWVNSPTRFSNQYYKLLLKLKWQPKKWDGPFQYVAKAPGADDDDEQLMMLPTDYALIQDEKMRPWVEKYAEDRDAFFNDFAKVFAKLIELG 267          
BLAST of CX292952 vs. ExPASy Swiss-Prot
Match: CCPR2_ASPFU (Putative heme-binding peroxidase OS=Aspergillus fumigatus GN=AFUA_6G13570 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.727e-16
Identity = 46/111 (41.44%), Postives = 55/111 (49.55%), Query Frame = 1
Query:    4 LSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF-----------------------XXXXXXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELG 267
            L+GGHTLGRCH +RSGF+GPW NNP  F N +F                                     P+D AL  DP FR  V+KYAAD+D  F  +A+A  KL ELG
Sbjct:  158 LAGGHTLGRCHIDRSGFQGPWVNNPTRFSNQFFKLLLTLDWKPKTLPNGISQFVYVDPDAEEGDEPLMMLPTDIALKTDPAFRVWVDKYAADKDLFFDHFAKAFAKLMELG 268          
BLAST of CX292952 vs. ExPASy Swiss-Prot
Match: APX8_ORYSJ (Probable L-ascorbate peroxidase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=APX8 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 3.727e-16
Identity = 48/105 (45.71%), Postives = 57/105 (54.29%), Query Frame = 1
Query:    4 LSGGHTLGRCHKERSGF---------EGP-------WTNNPLIFDNSYFXXXXXXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGS 270
            LSG HTLGR   +RSG+         +GP       WT   L FDNSYF              P+D AL EDP F+   EKYA D++A F DYAEAH KLS+LG+
Sbjct:  242 LSGAHTLGRSRPDRSGWGKPETKYTKDGPGEPGGQSWTVEWLKFDNSYFKDIKEQRDQDLLVLPTDAALFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSDLGA 346          
BLAST of CX292952 vs. ExPASy Swiss-Prot
Match: APX7_ORYSJ (Probable L-ascorbate peroxidase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=APX7 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.727e-16
Identity = 48/106 (45.28%), Postives = 54/106 (50.94%), Query Frame = 1
Query:    1 VLSGGHTLGRCHKERSGFEGP----------------WTNNPLIFDNSYFXXXXXXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGS 270
            VLSG HTLGR   ERSG+  P                WT   L FDNSYF              P+D AL EDP F+   EKYA D++A F DYA AH KLS LG+
Sbjct:  242 VLSGAHTLGRSRPERSGWGKPETKYTKNGPGAPGGQSWTAEWLKFDNSYFKEIKEKRDQDLLVLPTDAALFEDPTFKVYAEKYAEDQEAFFKDYAGAHAKLSNLGA 347          
BLAST of CX292952 vs. ExPASy Swiss-Prot
Match: APX6_ORYSJ (Probable L-ascorbate peroxidase 6, chloroplastic OS=Oryza sativa subsp. japonica GN=APX6 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.727e-16
Identity = 48/105 (45.71%), Postives = 54/105 (51.43%), Query Frame = 1
Query:    4 LSGGHTLGRCHKERSGFEGP----------------WTNNPLIFDNSYFXXXXXXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGS 270
            LSG HTLGR   ERSG+  P                WT+  L FDNSYF              P+D  L ED  F+   EKYAAD+DA F DYAEAH KLS LG+
Sbjct:  194 LSGAHTLGRSRPERSGWGKPETKYTKNGPGAPGGQSWTSQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDSSFKIYAEKYAADQDAFFEDYAEAHAKLSNLGA 298          
BLAST of CX292952 vs. ExPASy Swiss-Prot
Match: APXS_ARATH (L-ascorbate peroxidase S, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=APXS PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 8.304e-16
Identity = 49/105 (46.67%), Postives = 55/105 (52.38%), Query Frame = 1
Query:    4 LSGGHTLGRCHKERSGF---------EGP-------WTNNPLIFDNSYFXXXXXXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGS 270
            LSG HTLGR   ERSG+         EGP       WT   L FDNSYF              P+D A+ ED  F+   EKYAAD+DA F DYA AH KLS LG+
Sbjct:  258 LSGAHTLGRSRPERSGWGKPETKYTKEGPGAPGGQSWTPEWLKFDNSYFKEIKEKRDEDLLVLPTDAAIFEDSSFKVYAEKYAADQDAFFKDYAVAHAKLSNLGA 362          
The following BLAST results are available for this feature:
BLAST of CX292952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
APX5_ARATH2.410e-2360.23L-ascorbate peroxidase 5, peroxisomal OS=Arabidops... [more]
CCPR2_CRYNE5.557e-2054.55Putative heme-binding peroxidase OS=Cryptococcus n... [more]
CCPR2_EMENI2.854e-1639.64Putative heme-binding peroxidase OS=Emericella nid... [more]
CCPR_GIBZE3.727e-1642.31Cytochrome c peroxidase, mitochondrial OS=Gibberel... [more]
CCPR2_USTMA3.727e-1640.91Putative heme-binding peroxidase OS=Ustilago maydi... [more]
CCPR2_ASPFU3.727e-1641.44Putative heme-binding peroxidase OS=Aspergillus fu... [more]
APX8_ORYSJ3.727e-1645.71Probable L-ascorbate peroxidase 8, chloroplastic O... [more]
APX7_ORYSJ3.727e-1645.28Probable L-ascorbate peroxidase 7, chloroplastic O... [more]
APX6_ORYSJ3.727e-1645.71Probable L-ascorbate peroxidase 6, chloroplastic O... [more]
APXS_ARATH8.304e-1646.67L-ascorbate peroxidase S, chloroplastic/mitochondr... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC04023G01SK FlavFr1 Citrus clementina cDNA clone C04023G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292952 ID=CX292952; Name=CX292952; organism=Citrus clementina; type=EST; length=430bp
GTTTTATCCGGCGGTCATACATTGGGTAGGTGCCACAAGGAGCGTTCTGG
ATTTGAAGGACCCTGGACTAACAATCCACTTATTTTTGACAATTCATATT
TTAAGGAATTGCTGAGTGGAGAGAAAGAAGGTCTACTTCAGCTGCCATCA
GACAAGGCTCTTCTCGAGGACCCAGTGTTTCGTCCTCTTGTTGAAAAATA
TGCTGCAGATGAGGATGCCGTCTTTGCAGATTACGCTGAAGCTCATTTGA
AGCTCTCAGAACTCGGATCTGCGGATGCTGAGTAATGAATCAAATTATGA
AGCAGCTGAATGCGGCTATCCATGTACTTTATTGTGGCTTCTAAAGTCTC
AAATTTCTGGTTATGTCCTTGTATTTAAATTGGTTGATGTGATGGAATCC
AAATAGCAAAAGCTGCCACATTAGTGTTTG
back to top