CX293240

Overview
NameCX293240
Unique NameCX293240
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length648
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX293240 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.691e-15
Identity = 65/218 (29.82%), Postives = 105/218 (48.17%), Query Frame = 1
Query:   22 IDVGQAAFNTSLNLLSNTIFSIDLVNPNEREFKDT--VSGILEEV----GKPNLSDHFPLLKKFDLQGIKRRITVYSAKMLEVFDRLVDQRLKH--RQEHGCSISTECKDILDTLLNII----QDKSVEIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKP-IEESDITRLPYLQAVVKETLRLHPAVPLLLPRK 636
            +D+ +  F  + ++L    F       +E EF DT  +  ++ E     G    SD FP+     L  +   I+    ++ +VF +L D  L+H          S + KDI+D +L+++    +D S+ +   H+K    ++ IAG DT + TM W M EL  NP             +G  +  I + D+ ++P+L  V+KET RLHP  PLLLPR+
Sbjct:  167 VDLSKTLFWLAASILFRVAFGQSF---HESEFTDTDKIDELVFETETAQGSFTCSDFFPIA---GLGWLVDWISGQHKRLNDVFLKL-DALLQHVIDDHSNPGRSKDHKDIVDVMLDVMHKQGKDDSLRLTIDHIKGLLTNIIIAGIDTGALTMIWTMTELARNPEIMKKVQGEIRDRLGNNRERITKEDLDKVPFLNLVIKETFRLHPVAPLLLPRE 377          
BLAST of CX293240 vs. ExPASy Swiss-Prot
Match: CP17A_MESAU (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mesocricetus auratus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.884e-15
Identity = 60/232 (25.86%), Postives = 101/232 (43.53%), Query Frame = 1
Query:   16 KAIDVGQAAFNTSLNLLSNTIFSIDLVN--PNEREFKDTVSGILEEVGKPNLSDHFPLLKKFDLQGIKRRITVYSAKMLEVFDRLVDQRLKHRQEHGCSISTECK-----DILDTLLNIIQDKSVEIETK--------------HLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKD 648
            ++ID+ +  FN+  N++    F I   N  P     K    GIL  +G  +L D FP L            T++  K ++    ++ + +K R E    I  +CK     D + +L++++       +                H+    AD+F AG +TT+S + W +A LLHNP           Q +G  +    +D   L  L+A ++E LR+ P  P+L+P +A  D
Sbjct:  163 ESIDLSEPIFNSITNIICIICFGISYENRDPILATIKSFTEGILNSLGNDHLVDIFPWL------------TIFPNKTVD----MIKKNVKIRDEVLSGILEKCKEKFNSDSISSLMDLLIQAKTNADNNNTSEGQGSNAFSDMHILATIADIFGAGIETTASVLSWIIAFLLHNPEVKKKIQKEIDQNIGFSRTPTFNDRNHLLMLEATIREVLRIRPVAPMLIPHRANSD 378          
BLAST of CX293240 vs. ExPASy Swiss-Prot
Match: CP17A_HORSE (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Equus caballus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.767e-15
Identity = 61/223 (27.35%), Postives = 101/223 (45.29%), Query Frame = 1
Query:   16 KAIDVGQAAFNTSLNLLSNTIFSIDLV--NPNEREFKDTVSGILEEVGKPNLSDHFPLLKKF---DLQGIKRRITVYSAKMLEVFDRLVDQRLKHRQEHGCSISTECKDIL-------DTLLNIIQDKSVEIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKD 648
            + ID+    F    N++    F+   +  +P     ++   GILE + K N+ D FP LK F    L+ ++  + + +  + ++F+       KH++       T   D+L       D         S  +  KH+     D+F AG +TT+S ++W +A LLH+P           Q VG  +    SD  RL  L+A ++E LR+ P  P+L+P KA  D
Sbjct:  163 QTIDLSSPLFLAVTNVICWICFNSSYMKGDPALETMQNYHKGILETLEKDNVVDIFPALKIFPNKSLEKMRHCVNIRNELLSKIFE-------KHKENFNSDSITSMLDLLIQAKKNSDNNNTGPDQDSKLLSDKHILATIGDIFGAGVETTTSVVKWIVAFLLHDPQLKKKIQEEIDQNVGFSRTPTLSDRNRLLLLEATIREVLRIRPVAPMLIPHKALVD 378          
BLAST of CX293240 vs. ExPASy Swiss-Prot
Match: C71BQ_ARATH (Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=CYP71B26 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.767e-15
Identity = 58/186 (31.18%), Postives = 90/186 (48.39%), Query Frame = 1
Query:  103 NEREFKDTVSGILEEVGKPNLSDHFP----LLKKFD-LQGIKRRITVYSAKMLEVFDRLVDQRLKHRQEHGCSISTECKDILDTLLNIIQDKSV----EIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPR 633
            N   F   V    E +G  + SD  P    ++ KF+ LQG +++    S + L+ F   +    K  +E G       +D++D LL + +++ V    ++   H+K    ++ + G DT++ TM WAMAEL  NP             +   + I   D  +L YL+ V+KET RLHP  PLLLPR
Sbjct:  197 NSDRFNKLVRDTFEMLGSFSASDFIPYVGWIIDKFNGLQGWRKK----SFRDLDAFYEQIFDLHKEEKEVGS------EDLVDVLLRLEKEEIVVGNGKLTRNHIKAILMNILLGGIDTSAITMTWAMAELAKNPRVMKKVQAEIRNQIKNKERISFDDTDKLEYLKMVIKETWRLHPPTPLLLPR 372          
BLAST of CX293240 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.919e-15
Identity = 53/164 (32.32%), Postives = 85/164 (51.83%), Query Frame = 1
Query:  160 NLSDHFPLLKKFDLQGIKRRITVYSAKMLEVF-DRLVDQRLKHRQEHGCSISTECKDILDTLLNIIQDKSVEIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKD 648
            N  D  P+L+ F L+G  +         L++F D  VD+R K       + + E K  +D +L+    +  EI   ++ +   ++ +A  +TT  ++EW +AEL+++P           + +G    + E DI +LPYLQAVVKETLRL  A+PLL+P     D
Sbjct:  223 NYGDFIPILRPF-LKGYLKICKEVKETRLKLFKDYFVDERKKLGSTKSTNNNNELKCAIDHILDA--QRKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQQKLRDEIDRVLGAGHQVTEPDIQKLPYLQAVVKETLRLRMAIPLLVPHMNLHD 383          
BLAST of CX293240 vs. ExPASy Swiss-Prot
Match: CP17A_ORYLA (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Oryzias latipes GN=cyp17a1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.425e-15
Identity = 54/187 (28.88%), Postives = 93/187 (49.73%), Query Frame = 1
Query:  133 GILEEVGKPNLSDHFPLLKKF---DLQGIKRRITVYSAKMLEVFDRLVDQRLKHRQEHGCSISTECKDILDTLLNIIQD------------KSVEIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKD 648
            GI++ V K +L D FP L+ F   DL+ +K+ + V    + + F+       +H+ ++   +    +D+LD LL   +             ++V +   HL     D+F AG +TT++ ++WA+  L+H P           + VG  +P + SD   LP+L+A ++E LR+ P  PLL+P  A  D
Sbjct:  211 GIVDTVAKDSLVDIFPWLQIFPNKDLRLLKQCVAVRDQLLQKKFE-------EHKSDYSDHVQ---RDLLDALLRAKRSAENNNTAAEFSAEAVGLSDDHLLMTVGDIFGAGVETTTTVLKWAITYLIHYPEVQKQIQEELDRKVGVDRPPQLSDRGSLPFLEATIREVLRIRPVAPLLIPHVALSD 387          
BLAST of CX293240 vs. ExPASy Swiss-Prot
Match: CP17A_HUMAN (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Homo sapiens GN=CYP17A1 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.425e-15
Identity = 64/223 (28.70%), Postives = 108/223 (48.43%), Query Frame = 1
Query:   16 KAIDVGQAAFNTSLNLLSNTIFSIDLVN--PNEREFKDTVSGILEEVGKPNLSDHFPLLKKFDLQGIKRRITVYSAKMLEVFDRLVDQRLKHRQEHGCSISTECKDILDTLL---------NIIQDKSVEI-ETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKD 648
            ++ID+    F    N++S   F+    N  P     ++   GI++ + K +L D  P LK F  + +++         +++ + L+++ L++ +E   S S    ++LDTL+         N   D+  E+    H+     D+F AG +TT+S ++W +A LLHNP           Q VG  +    SD  RL  L+A ++E LRL P  P+L+P KA  D
Sbjct:  163 QSIDISFPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPNKTLEKL-----KSHVKIRNDLLNKILENYKEKFRSDSIT--NMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVD 378          
BLAST of CX293240 vs. ExPASy Swiss-Prot
Match: CP17A_BISBI (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Bison bison GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.425e-15
Identity = 62/227 (27.31%), Postives = 106/227 (46.70%), Query Frame = 1
Query:   16 KAIDVGQAAFNTSLNLLSNTIFSIDLVN--PNEREFKDTVSGILEEVGKPNLSDHFPLLKKFDLQGIKRRITVYSAKMLEVFDRLVDQRLKHRQEHGCSISTECKDILDTLLNIIQDKSVE--------------IETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKD 648
            +AID+ +       N++S   F+    N  P  +  ++   GILE + K  L D FP+LK F  + +++         ++  + L+++ L+  QE+  S      D +  LL+I+    V               + ++H+     D+F AG +TT+S ++W +A LLH+P           Q +G  +    SD  RL  L+A ++E LR+ P  P L+P KA  D
Sbjct:  163 EAIDLSEPLSLAVTNIISFICFNFSFKNEDPALKAIQNVNDGILEVLSKEVLLDIFPVLKIFPSKAMEKM-----KGYVQTRNELLNEILEKCQENFSS------DSITNLLHILIQAKVNADNNNAGPDQDSKLLSSRHMLATIGDIFGAGVETTTSVIKWIVAYLLHHPSLKKRIQDDIDQIIGFNRTPAISDRNRLVLLEATIREVLRIRPVAPTLIPHKAVID 378          
BLAST of CX293240 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.425e-15
Identity = 61/207 (29.47%), Postives = 102/207 (49.28%), Query Frame = 1
Query:   28 VGQAAFNTSLNLLSNTIF--SIDLVNPNEREFKDTVSGILEEVGKPNLSDHFPLLK-KFDLQGIKRRITVYSAKMLEVFDRLVDQRLKHRQEHGCSISTECKDILDTLLNIIQDKSVEIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKA 639
            +G  AFN    L     F  S  +++    EFK  V   L+      +++H P L+  F L+  +     + A+   +   ++ +  + R++ G +     +  +D LL + QDK  ++    +     D+  AG DTT+ ++EWAMAEL+ NP           + +G  + + E+D + LPYLQ V KE +RLHP  PL+LP +A
Sbjct:  175 LGVVAFNNITRLAFGKRFVNSEGVMDEQGVEFKAIVENGLKLGASLAMAEHIPWLRWMFPLE--EGAFAKHGARRDRLTRAIMAEHTEARKKSGGAK----QHFVDALLTL-QDK-YDLSEDTIIGLLWDMITAGMDTTAISVEWAMAELIRNPRVQQKVQEELDRVIGLERVMTEADFSNLPYLQCVTKEAMRLHPPTPLMLPHRA 373          
BLAST of CX293240 vs. ExPASy Swiss-Prot
Match: C77A3_SOYBN (Cytochrome P450 77A3 OS=Glycine max GN=CYP77A3 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.425e-15
Identity = 48/164 (29.27%), Postives = 82/164 (50.00%), Query Frame = 1
Query:  157 PNLSDHFPLLKKFDLQGIKRRITVYSAKMLEVFDRLVDQRLKHRQEHGCSISTECKDILDTLLNI-IQDKSVEIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATK 645
            P + D+ P+L  F  +  K+ + V   + +E    +++QR +  Q  G   +      LDTL ++ ++ K        L    ++    G DTT++ +EW +A+L+ NP           +TVG+ K ++E D+ ++PYL AVVKE LR HP    +L    T+
Sbjct:  223 PRIDDYLPILSPFFSKQRKKALEV-RREQVEFLVPIIEQRRRAIQNPGSDHTATTFSYLDTLFDLKVEGKKSAPSDAELVSLCSEFLNGGTDTTATAVEWGIAQLIANPNVQTKLYEEIKRTVGE-KKVDEKDVEKMPYLHAVVKELLRKHPPTHFVLTHAVTE 384          
The following BLAST results are available for this feature:
BLAST of CX293240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 181
Match NameE-valueIdentityDescription
C71BH_ARATH1.691e-1529.82Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
CP17A_MESAU2.884e-1525.86Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mesocr... [more]
CP17A_HORSE3.767e-1527.35Steroid 17-alpha-hydroxylase/17,20 lyase OS=Equus ... [more]
C71BQ_ARATH3.767e-1531.18Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=C... [more]
TCMO_SOYBN4.919e-1532.32Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
CP17A_ORYLA6.425e-1528.88Steroid 17-alpha-hydroxylase/17,20 lyase OS=Oryzia... [more]
CP17A_HUMAN6.425e-1528.70Steroid 17-alpha-hydroxylase/17,20 lyase OS=Homo s... [more]
CP17A_BISBI6.425e-1527.31Steroid 17-alpha-hydroxylase/17,20 lyase OS=Bison ... [more]
C98A2_SOYBN6.425e-1529.47Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C77A3_SOYBN6.425e-1529.27Cytochrome P450 77A3 OS=Glycine max GN=CYP77A3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC04029C02SK FlavFr1 Citrus clementina cDNA clone C04029C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293240 ID=CX293240; Name=CX293240; organism=Citrus clementina; type=EST; length=648bp
AATTCGGCACGTAGGAAAGCAATAGATGTTGGCCAAGCTGCTTTCAATAC
TTCACTTAATTTATTATCCAACACAATTTTTTCTATTGATTTGGTTAATC
CCAATGAGCGAGAGTTTAAGGATACAGTTTCTGGTATCTTGGAAGAAGTA
GGAAAGCCTAACTTGTCCGACCATTTTCCTCTTCTCAAAAAGTTTGATCT
GCAGGGGATAAAGCGCCGCATCACAGTTTATAGTGCCAAGATGCTCGAGG
TGTTTGATCGCTTGGTTGATCAACGATTGAAGCATAGACAAGAACATGGT
TGCAGTATTAGCACCGAATGTAAAGATATATTAGATACTCTTCTCAATAT
TATCCAAGACAAGAGTGTTGAGATTGAAACAAAACATCTCAAGCACTTTT
TTGCGGATTTGTTTATTGCGGGGAATGACACAACTTCAAGTACAATGGAA
TGGGCAATGGCAGAACTACTCCACAACCCTGAGGCTTTATTGAAAGCAAA
ATTGGAGCTAGAACAAACAGTTGGCAAGTGTAAACCAATTGAGGAATCTG
ACATCACTCGGCTACCTTATCTACAAGCTGTTGTTAAAGAAACTTTGAGA
TTGCACCCTGCAGTTCCCTTATTACTTCCCCGCAAAGCCACAAAAGAT
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