CX293826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAS_BOTFU (Ras-like protein OS=Botryotinia fuckeliana GN=ras1 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.725e-17 Identity = 48/146 (32.88%), Postives = 83/146 (56.85%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 KLV++G G GKS L ++ ++ F++ + TI ++ Q + +++ ++ DTAGQE Y ++ Y R ++VY IT++ SFE + Q+ L+ + + + GNK DL R+V+ +E Q A + G F+ETSAK+ Sbjct: 10 KLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQCV-IDEEVALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEIMTFQQQILRVKDKDYFPIIVVGNKCDLEGERQVSKQEGQQLADDFGCKFIETSAKS 154
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RASC_DICDI (Ras-like protein rasC OS=Dictyostelium discoideum GN=rasC PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.725e-17 Identity = 54/147 (36.73%), Postives = 84/147 (57.14%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMVMALAGNKADLLDA-RKVTAEEAQAYAQENGLFFMETSAKT 539 KLV++GD G GKS+L ++ + QFI + TI ++ Q + +++ +I DTAGQE Y ++ Y R +IVY I ++ASFE + ++ L+ + + + GNKADL D RKV E + A+ G F+ETSAK+ Sbjct: 6 KLVIVGDGGVGKSALTIQLTQNQFIAEYDPTIENSYRKQ-VNIDEEVYMLDILDTAGQEEYSAMRDQYIRSGRGFLIVYSIISRASFEAVTTFREQILRVKDLSTYPIVIIGNKADLPDKDRKVPPMEGKELAKSFGAPFLETSAKS 151
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAN4_ARATH (GTP-binding nuclear protein Ran-4 OS=Arabidopsis thaliana GN=RAN4 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.725e-17 Identity = 50/158 (31.65%), Postives = 88/158 (55.70%), Query Frame = 3 Query: 72 MATTGNKNINA---KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 MA +N++ KL+++GD G GK++ + R + G+F E T+G + N ++FE WDTAGQE+Y L YY AII++D+T + ++ +W ++L+ + N+ + L GNK D + +R++ + +Y ++ L + E SAK Sbjct: 1 MALPNQQNVDLPTFKLLIVGDGGTGKTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRGKIRFECWDTAGQEKYSGLKDAYYIHGQCAIIMFDVTARHTYMNIDRWYRDLR-RVCKNIPIVLCGNKVD-VPSRQIKPKHV-SYHRKKCLQYYEMSAK 155
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAN2_ORYSJ (GTP-binding nuclear protein Ran-2 OS=Oryza sativa subsp. japonica GN=RAN2 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.725e-17 Identity = 50/145 (34.48%), Postives = 84/145 (57.93%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 KLV++GD G GK++ V R + G+F + E TIG N ++F WDTAGQE++ L YY AII++D+T++ +++ W ++L + N+ + L GNK D+ + R+V A++ + ++N L + E SAK+ Sbjct: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFTTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN-RQVKAKQVTFHRKKN-LQYYEISAKS 156
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAN2_ORYSI (GTP-binding nuclear protein Ran-2 OS=Oryza sativa subsp. indica GN=RAN2 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.725e-17 Identity = 50/145 (34.48%), Postives = 84/145 (57.93%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 KLV++GD G GK++ V R + G+F + E TIG N ++F WDTAGQE++ L YY AII++D+T++ +++ W ++L + N+ + L GNK D+ + R+V A++ + ++N L + E SAK+ Sbjct: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFTTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN-RQVKAKQVTFHRKKN-LQYYEISAKS 156
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB36_MOUSE (Ras-related protein Rab-36 OS=Mus musculus GN=Rab36 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.725e-17 Identity = 49/149 (32.89%), Postives = 79/149 (53.02%), Query Frame = 3 Query: 102 AKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNP-NMVMALAGNKADLLDARKVTAEEAQA--YAQENGLFFMETSAKT 539 +K+V++GD+ GK+SL+ R K F ++TIG F + + +IWDTAGQE++ +A YYRGA I +D+T+ + E ++W++++ + + + L G K DLL EA+A A E + SAKT Sbjct: 58 SKVVVVGDLYVGKTSLIHRLCKNVFDHDYKATIGVDFEIERFEIAGIPYSLQIWDTAGQEKFKCIASAYYRGAQVIITAFDLTDVQTLEHTRQWLEDVLRENEAGSCFIFLVGTKKDLLSGAACEQAEAEAVHLANEMQAEYWSVSAKT 206
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB32_HUMAN (Ras-related protein Rab-32 OS=Homo sapiens GN=RAB32 PE=1 SV=3) HSP 1 Score: 87.4261 bits (215), Expect = 4.725e-17 Identity = 49/151 (32.45%), Postives = 87/151 (57.62%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ-----GNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLF-FMETSAK 536 K++++G++G GK+S++ R+V F + +TIG F + L + T V+ ++WD AGQER+ ++ +YY+ A A +V+DI+ ++FE KW +L ++ G+P + LA NK D + + + +E+G + ETSAK Sbjct: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA-NKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAK 176
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB28_BOVIN (Ras-related protein Rab-28 OS=Bos taurus GN=RAB28 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.725e-17 Identity = 52/149 (34.90%), Postives = 77/149 (51.68%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAV-NDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKW---VQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 K+V+LGD +GK+SL F + F + + TIG FF + + + V ++WD GQ + Y GA ++VYD+TN SFE + W V+++ + ++AL GNK DL R V E+ + QENG SAKT Sbjct: 14 KIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGSLNVTLQVWDIGGQTIGGKMLDKYIYGAQGVLLVYDVTNYQSFENLEDWYSVVKKVSEESETQPLVALVGNKIDLEHMRTVKPEKHLRFCQENGFSSHFVSAKT 162
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RANL_DROME (GTP-binding nuclear protein Ran-like OS=Drosophila melanogaster GN=ran-like PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 6.171e-17 Identity = 45/145 (31.03%), Postives = 82/145 (56.55%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 KL+L+GD G GK++LV R + G+F +T+G N + ++WDTAGQERY L Y+ + AII++D+ + ++ K+W ++L + N+ + + GNK D++ K T ++ + ++ ++ +E SAK+ Sbjct: 12 KLILIGDGGTGKTTLVKRHLTGEFKMQYNATLGVEVEQLLFNTNRGVFRIDVWDTAGQERYGGLRDGYFVQSQCAIIMFDVASSNTYNNVKRWHRDL-VRVCGNIPIVICGNKVDIM--HKKTWKKGVDFDRKTNIYLIEMSAKS 153
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAN1_ORYSJ (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. japonica GN=RAN1 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 6.171e-17 Identity = 50/145 (34.48%), Postives = 84/145 (57.93%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 KLV++GD G GK++ V R + G+F + E TIG N ++F WDTAGQE++ L YY AII++D+T++ +++ W ++L + N+ + L GNK D+ + R+V A++ + ++N L + E SAK+ Sbjct: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN-RQVKAKQVTFHRKKN-LQYYEVSAKS 156 The following BLAST results are available for this feature:
BLAST of CX293826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX293826 ID=CX293826; Name=CX293826; organism=Citrus clementina; type=EST; length=546bpback to top |